RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C HMI1Q12039 706 aa3.67□□□□□ -1.82
YIR040CYIR040C FAL1Q12099 399 aaKnown RBP3.67□□□□□ -1.82
YIR040CYIR040C NFI1Q12216 726 aa3.67□□□□□ -1.82
YIR040CYIR040C BI4P03879 638 aa3.66□□□□□ -1.82
YIR040CYIR040C SUP35P05453 685 aaKnown RBP3.66□□□□□ -1.82
YIR040CYIR040C YEF3P16521 1044 aaKnown RBP3.66□□□□□ -1.82
YIR040CYIR040C SMY1P32364 656 aaKnown RBP3.66□□□□□ -1.82
YIR040CYIR040C NFU1P32860 256 aa3.66□□□□□ -1.82
YIR040CYIR040C YKL151CP36059 337 aa3.66□□□□□ -1.82
YIR040CYIR040C TIF5P38431 405 aaKnown RBP3.66□□□□□ -1.82
YIR040CYIR040C MBP1P39678 833 aa3.66□□□□□ -1.82
YIR040CYIR040C UBP5P39944 805 aa3.66□□□□□ -1.82
YIR040CYIR040C TIM54P47045 478 aa3.66□□□□□ -1.82
YIR040CYIR040C DNM1P54861 757 aa3.66□□□□□ -1.82
YIR040CYIR040C PLB2Q03674 706 aa3.66□□□□□ -1.82
YIR040CYIR040C TAP42Q04372 366 aa3.66□□□□□ -1.82
YIR040CYIR040C YMR111CQ04461 462 aaPredicted RBP3.66□□□□□ -1.82
YIR040CYIR040C SLK19Q08581 821 aaKnown RBP3.66□□□□□ -1.82
YIR040CYIR040C ACM1Q08981 209 aa3.66□□□□□ -1.82
YIR040CYIR040C YPL277CQ08989 487 aa3.66□□□□□ -1.82
YIR040CYIR040C SSF2Q12153 453 aaPredicted RBP3.66□□□□□ -1.82
YIR040CYIR040C SVS1Q12254 260 aa3.66□□□□□ -1.82
YIR040CYIR040C SNU66Q12420 587 aaPredicted RBP3.66□□□□□ -1.82
YIR040CYIR040C APC2Q12440 853 aa3.66□□□□□ -1.82
YIR040CYIR040C CYC1P00044 109 aaPredicted RBP3.65□□□□□ -1.83
YIR040CYIR040C PRP6P19735 899 aaPredicted RBP3.65□□□□□ -1.83
YIR040CYIR040C AGP1P25376 633 aa3.65□□□□□ -1.83
YIR040CYIR040C HIR2P32480 875 aa3.65□□□□□ -1.83
YIR040CYIR040C SEC6P32844 805 aa3.65□□□□□ -1.83
YIR040CYIR040C KDX1P36005 433 aa3.65□□□□□ -1.83
YIR040CYIR040C VBA5P36172 582 aa3.65□□□□□ -1.83
YIR040CYIR040C SIC1P38634 284 aa3.65□□□□□ -1.83
YIR040CYIR040C GEM1P39722 662 aa3.65□□□□□ -1.83
YIR040CYIR040C MEP1P40260 492 aa3.65□□□□□ -1.83
YIR040CYIR040C GYP7P48365 746 aa3.65□□□□□ -1.83
YIR040CYIR040C MTC3P53077 123 aa3.65□□□□□ -1.83
YIR040CYIR040C BTN2P53286 410 aa3.65□□□□□ -1.83
YIR040CYIR040C SNO2P53823 222 aa3.65□□□□□ -1.83
YIR040CYIR040C POB3Q04636 552 aaKnown RBP3.65□□□□□ -1.83
YIR040CYIR040C NSE3Q05541 303 aa3.65□□□□□ -1.83
YIR040CYIR040C HRQ1Q05549 1077 aa3.65□□□□□ -1.83
YIR040CYIR040C ATG13Q06628 738 aa3.65□□□□□ -1.83
YIR040CYIR040C GRC3Q07845 632 aa3.65□□□□□ -1.83
YIR040CYIR040C CLP1Q08685 445 aaPredicted RBP3.65□□□□□ -1.83
YIR040CYIR040C RTP1Q12751 981 aa3.65□□□□□ -1.83
YIR040CYIR040C SSK22P25390 1331 aaPredicted RBP3.65□□□□□ -1.83
YIR040CYIR040C INH1P01097 85 aa3.64□□□□□ -1.83
YIR040CYIR040C GAL10P04397 699 aa3.64□□□□□ -1.83
YIR040CYIR040C CMP2P14747 604 aa3.64□□□□□ -1.83
YIR040CYIR040C MER1P16523 270 aa3.64□□□□□ -1.83
YIR040CYIR040C ACE2P21192 770 aa3.64□□□□□ -1.83
YIR040CYIR040C TRX2P22803 104 aaKnown RBP3.64□□□□□ -1.83
YIR040CYIR040C CDC60P26637 1090 aaKnown RBP3.64□□□□□ -1.83
YIR040CYIR040C SBA1P28707 216 aaKnown RBP3.64□□□□□ -1.83
YIR040CYIR040C ANP1P32629 500 aa3.64□□□□□ -1.83
YIR040CYIR040C YKL100CP34248 587 aa3.64□□□□□ -1.83
YIR040CYIR040C VPS24P36095 224 aaKnown RBP3.64□□□□□ -1.83
YIR040CYIR040C CCL1P37366 393 aa3.64□□□□□ -1.83
YIR040CYIR040C RFC5P38251 354 aa3.64□□□□□ -1.83
YIR040CYIR040C EXO84P38261 753 aa3.64□□□□□ -1.83
YIR040CYIR040C PAF1P38351 445 aa3.64□□□□□ -1.83
YIR040CYIR040C LAM1P38851 1228 aa3.64□□□□□ -1.83
YIR040CYIR040C UTP18P40362 594 aaPredicted RBP3.64□□□□□ -1.83
YIR040CYIR040C HFM1P51979 1187 aa3.64□□□□□ -1.83
YIR040CYIR040C YNL058CP53947 316 aa3.64□□□□□ -1.83
YIR040CYIR040C ROT1Q03691 256 aa3.64□□□□□ -1.83
YIR040CYIR040C YDR132CQ03900 495 aa3.64□□□□□ -1.83
YIR040CYIR040C RSM24Q03976 319 aa3.64□□□□□ -1.83
YIR040CYIR040C SGD1Q06132 899 aa3.64□□□□□ -1.83
YIR040CYIR040C NDL1Q06568 189 aa3.64□□□□□ -1.83
YIR040CYIR040C ISA1Q07821 250 aaPredicted RBP3.64□□□□□ -1.83
YIR040CYIR040C XYL2Q07993 356 aa3.64□□□□□ -1.83
YIR040CYIR040C HMG1P12683 1054 aa3.63□□□□□ -1.83
YIR040CYIR040C NAT1P12945 854 aaKnown RBP3.63□□□□□ -1.83
YIR040CYIR040C MCM3P24279 971 aaKnown RBP3.63□□□□□ -1.83
YIR040CYIR040C MEF1P25039 761 aa3.63□□□□□ -1.83
YIR040CYIR040C APL1P27351 700 aa3.63□□□□□ -1.83
YIR040CYIR040C PSO2P30620 661 aa3.63□□□□□ -1.83
YIR040CYIR040C PIN4P34217 668 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
YIR040CYIR040C COY1P34237 679 aa3.63□□□□□ -1.83
YIR040CYIR040C BFR1P38934 470 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
YIR040CYIR040C UBP12P39538 1254 aa3.63□□□□□ -1.83
YIR040CYIR040C ENP2P48234 707 aaKnown RBP3.63□□□□□ -1.83
YIR040CYIR040C RIM8P53179 542 aa3.63□□□□□ -1.83
YIR040CYIR040C VPS30Q02948 557 aa3.63□□□□□ -1.83
YIR040CYIR040C SPC19Q03954 165 aa3.63□□□□□ -1.83
YIR040CYIR040C VTI1Q04338 217 aa3.63□□□□□ -1.83
YIR040CYIR040C VTS1Q08831 523 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
YIR040CYIR040C YOL098CQ12496 1037 aa3.63□□□□□ -1.83
YIR040CYIR040C ENT1Q12518 454 aa3.63□□□□□ -1.83
YIR040CYIR040C BRR1Q99177 341 aaPredicted RBP3.63□□□□□ -1.83
YIR040CYIR040C CHD1P32657 1468 aa3.62□□□□□ -1.83
YIR040CYIR040C SOD2P00447 233 aa3.62□□□□□ -1.83
YIR040CYIR040C RPS13P05756 151 aaKnown RBP3.62□□□□□ -1.83
YIR040CYIR040C TOM70P07213 617 aaKnown RBP3.62□□□□□ -1.83
YIR040CYIR040C APN1P22936 367 aa3.62□□□□□ -1.83
YIR040CYIR040C SSD1P24276 1250 aaKnown RBP RIP-Chip data3.62□□□□□ -1.83not detected
YIR040CYIR040C KRR1P25586 316 aaPredicted RBP3.62□□□□□ -1.83
YIR040CYIR040C IME2P32581 645 aa3.62□□□□□ -1.83
YIR040CYIR040C OTU2P38747 307 aaKnown RBP3.62□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms