RNA–Protein interactions for RNA: YHR206W

SKN7, Transcript of Nuclear response regulator and transcription factor, yeast

Gene SKN7, Length 1,869 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKN7	YHR206W	GNT1	Q12096	491 aa		3.88	□□□□□ -1.79
SKN7	YHR206W	HOM3	P10869	527 aa		3.88	□□□□□ -1.79
SKN7	YHR206W	GFD2	P25370	566 aa	Known RBP	3.88	□□□□□ -1.79
SKN7	YHR206W	URA1	P28272	314 aa	Predicted RBP	3.88	□□□□□ -1.79
SKN7	YHR206W	UBP5	P39944	805 aa		3.88	□□□□□ -1.79
SKN7	YHR206W	SEC26	P41810	973 aa	Known RBP	3.88	□□□□□ -1.79
SKN7	YHR206W	YGL176C	P46945	554 aa		3.88	□□□□□ -1.79
SKN7	YHR206W	NAN1	Q02931	896 aa	Known RBP	3.88	□□□□□ -1.79
SKN7	YHR206W	RRP9	Q06506	573 aa	Known RBP	3.88	□□□□□ -1.79
SKN7	YHR206W	RSB1	Q08417	382 aa		3.88	□□□□□ -1.79
SKN7	YHR206W	CLF1	Q12309	687 aa	Predicted RBP	3.88	□□□□□ -1.79
SKN7	YHR206W	ERR1	P0CX10	437 aa		3.87	□□□□□ -1.79
SKN7	YHR206W	ERR2	P0CX11	437 aa		3.87	□□□□□ -1.79
SKN7	YHR206W	RPL8A	P17076	256 aa	Known RBP	3.87	□□□□□ -1.79
SKN7	YHR206W	MSM1	P22438	575 aa		3.87	□□□□□ -1.79
SKN7	YHR206W	ABD1	P32783	436 aa	Predicted RBP	3.87	□□□□□ -1.79
SKN7	YHR206W	YHR020W	P38708	688 aa	Known RBP	3.87	□□□□□ -1.79
SKN7	YHR206W	PNT1	P38969	423 aa		3.87	□□□□□ -1.79
SKN7	YHR206W	GPP1	P41277	250 aa	Known RBP	3.87	□□□□□ -1.79
SKN7	YHR206W	YGR237C	P50089	785 aa		3.87	□□□□□ -1.79
SKN7	YHR206W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	3.87	□□□□□ -1.79	not detected
SKN7	YHR206W	APL5	Q08951	932 aa	Known RBP	3.87	□□□□□ -1.79
SKN7	YHR206W	CFT2	Q12102	859 aa	Predicted RBP	3.87	□□□□□ -1.79
SKN7	YHR206W	CYC1	P00044	109 aa	Predicted RBP	3.86	□□□□□ -1.79
SKN7	YHR206W	CDC31	P06704	161 aa	Known RBP	3.86	□□□□□ -1.79
SKN7	YHR206W	VPH1	P32563	840 aa	Known RBP	3.86	□□□□□ -1.79
SKN7	YHR206W	SLA2	P33338	968 aa		3.86	□□□□□ -1.79
SKN7	YHR206W	YKL069W	P36088	180 aa		3.86	□□□□□ -1.79
SKN7	YHR206W	UGA2	P38067	497 aa		3.86	□□□□□ -1.79
SKN7	YHR206W	FOL2	P51601	243 aa	Known RBP	3.86	□□□□□ -1.79
SKN7	YHR206W	SPC105	P53148	917 aa		3.86	□□□□□ -1.79
SKN7	YHR206W	YGR016W	P53209	190 aa		3.86	□□□□□ -1.79
SKN7	YHR206W	HOL1	P53389	586 aa		3.86	□□□□□ -1.79
SKN7	YHR206W	ERO1	Q03103	563 aa		3.86	□□□□□ -1.79
SKN7	YHR206W	PLB2	Q03674	706 aa		3.86	□□□□□ -1.79
SKN7	YHR206W	TDA5	Q06417	326 aa	Known RBP	3.86	□□□□□ -1.79
SKN7	YHR206W	CEX1	Q12453	761 aa		3.86	□□□□□ -1.79
SKN7	YHR206W	SPT7	P35177	1332 aa		3.86	□□□□□ -1.79
SKN7	YHR206W	BI4	P03879	638 aa		3.86	□□□□□ -1.79
SKN7	YHR206W	PRP6	P19735	899 aa	Predicted RBP	3.86	□□□□□ -1.79
SKN7	YHR206W	PRI2	P20457	528 aa		3.86	□□□□□ -1.79
SKN7	YHR206W	SFP1	P32432	683 aa		3.86	□□□□□ -1.79
SKN7	YHR206W	RXT2	P38255	430 aa		3.86	□□□□□ -1.79
SKN7	YHR206W	EXO84	P38261	753 aa		3.86	□□□□□ -1.79
SKN7	YHR206W	PEA2	P40091	420 aa		3.86	□□□□□ -1.79
SKN7	YHR206W	UBA2	P52488	636 aa		3.86	□□□□□ -1.79
SKN7	YHR206W	RCF1	Q03713	159 aa		3.86	□□□□□ -1.79
SKN7	YHR206W	SPC19	Q03954	165 aa		3.86	□□□□□ -1.79
SKN7	YHR206W	ATG13	Q06628	738 aa		3.86	□□□□□ -1.79
SKN7	YHR206W	TSR2	Q06672	205 aa	Known RBP	3.86	□□□□□ -1.79
SKN7	YHR206W	CDC45	Q08032	650 aa		3.86	□□□□□ -1.79
SKN7	YHR206W	NTG2	Q08214	380 aa		3.86	□□□□□ -1.79
SKN7	YHR206W	YPL277C	Q08989	487 aa		3.86	□□□□□ -1.79
SKN7	YHR206W	SGT2	Q12118	346 aa	Known RBP	3.86	□□□□□ -1.79
SKN7	YHR206W	SVS1	Q12254	260 aa		3.86	□□□□□ -1.79
SKN7	YHR206W	MPD2	Q99316	277 aa		3.86	□□□□□ -1.79
SKN7	YHR206W	RNA1	P11745	407 aa	Known RBP	3.85	□□□□□ -1.79
SKN7	YHR206W	SST2	P11972	698 aa	Known RBP	3.85	□□□□□ -1.79
SKN7	YHR206W	TPM1	P17536	199 aa	Known RBP	3.85	□□□□□ -1.79
SKN7	YHR206W	ECM32	P32644	1121 aa	Known RBP	3.85	□□□□□ -1.79
SKN7	YHR206W	YKL107W	P34251	309 aa		3.85	□□□□□ -1.79
SKN7	YHR206W	RRN3	P36070	627 aa		3.85	□□□□□ -1.79
SKN7	YHR206W	YHR218W	P38899	603 aa		3.85	□□□□□ -1.79
SKN7	YHR206W	VTC2	P43585	828 aa		3.85	□□□□□ -1.79
SKN7	YHR206W	SNO2	P53823	222 aa		3.85	□□□□□ -1.79
SKN7	YHR206W	TGL2	P54857	326 aa		3.85	□□□□□ -1.79
SKN7	YHR206W	SPP382	Q06411	708 aa	Predicted RBP	3.85	□□□□□ -1.79
SKN7	YHR206W	FLC1	Q08967	793 aa		3.85	□□□□□ -1.79
SKN7	YHR206W	ACM1	Q08981	209 aa		3.85	□□□□□ -1.79
SKN7	YHR206W	NOP58	Q12499	511 aa	Known RBP	3.85	□□□□□ -1.79
SKN7	YHR206W	RKM4	Q12504	494 aa		3.85	□□□□□ -1.79
SKN7	YHR206W	YOL087C	Q99247	1116 aa		3.85	□□□□□ -1.79
SKN7	YHR206W	NUP145	P49687	1317 aa		3.85	□□□□□ -1.79
SKN7	YHR206W	CHD1	P32657	1468 aa		3.84	□□□□□ -1.79
SKN7	YHR206W	KRR1	P25586	316 aa	Predicted RBP	3.84	□□□□□ -1.79
SKN7	YHR206W	AAD3	P25612	363 aa		3.84	□□□□□ -1.79
SKN7	YHR206W	STO1	P34160	861 aa	Known RBP	3.84	□□□□□ -1.79
SKN7	YHR206W	RKM3	P38222	552 aa		3.84	□□□□□ -1.79
SKN7	YHR206W	RFC5	P38251	354 aa		3.84	□□□□□ -1.79
SKN7	YHR206W	RRP8	P38961	392 aa	Known RBP	3.84	□□□□□ -1.79
SKN7	YHR206W	SPF1	P39986	1215 aa	Known RBP	3.84	□□□□□ -1.79
SKN7	YHR206W	SAP185	P40856	1058 aa		3.84	□□□□□ -1.79
SKN7	YHR206W	BNA1	P47096	177 aa		3.84	□□□□□ -1.79
SKN7	YHR206W	HLJ1	P48353	224 aa		3.84	□□□□□ -1.79
SKN7	YHR206W	BTN2	P53286	410 aa		3.84	□□□□□ -1.79
SKN7	YHR206W	YNL034W	P53963	612 aa		3.84	□□□□□ -1.79
SKN7	YHR206W	YNL018C	P53976	612 aa		3.84	□□□□□ -1.79
SKN7	YHR206W	ROT1	Q03691	256 aa		3.84	□□□□□ -1.79
SKN7	YHR206W	YDR132C	Q03900	495 aa		3.84	□□□□□ -1.79
SKN7	YHR206W	INO80	P53115	1489 aa		3.84	□□□□□ -1.79
SKN7	YHR206W	RPS13	P05756	151 aa	Known RBP	3.84	□□□□□ -1.8
SKN7	YHR206W	TOM70	P07213	617 aa	Known RBP	3.84	□□□□□ -1.8
SKN7	YHR206W	CMP2	P14747	604 aa		3.84	□□□□□ -1.8
SKN7	YHR206W	ACE2	P21192	770 aa		3.84	□□□□□ -1.8
SKN7	YHR206W	PEX5	P35056	612 aa		3.84	□□□□□ -1.8
SKN7	YHR206W	YKL151C	P36059	337 aa		3.84	□□□□□ -1.8
SKN7	YHR206W	TRZ1	P36159	838 aa	Predicted RBP	3.84	□□□□□ -1.8
SKN7	YHR206W	CAJ1	P39101	391 aa		3.84	□□□□□ -1.8
SKN7	YHR206W	RSP5	P39940	809 aa	Known RBP	3.84	□□□□□ -1.8
SKN7	YHR206W	ESL1	P40456	1118 aa		3.84	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms