RNA–Protein interactions for RNA: YGR104C

SRB5, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SRB5, Length 924 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRB5YGR104C SSD1P24276 1250 aaKnown RBP RIP-Chip data5.05□□□□□ -1.6not detected
SRB5YGR104C AGP1P25376 633 aa5.05□□□□□ -1.6
SRB5YGR104C URM1P40554 99 aaPredicted RBP5.05□□□□□ -1.6
SRB5YGR104C PHO23P50947 330 aa5.05□□□□□ -1.6
SRB5YGR104C SUN4P53616 420 aa5.05□□□□□ -1.6
SRB5YGR104C SVL3Q03088 825 aaKnown RBP5.05□□□□□ -1.6
SRB5YGR104C HRQ1Q05549 1077 aa5.05□□□□□ -1.6
SRB5YGR104C IMH1Q06704 911 aaKnown RBP5.05□□□□□ -1.6
SRB5YGR104C XYL2Q07993 356 aa5.05□□□□□ -1.6
SRB5YGR104C AIM39Q08223 395 aa5.05□□□□□ -1.6
SRB5YGR104C TY1B-AO13527 1196 aaKnown RBP5.04□□□□□ -1.6
SRB5YGR104C PFK1P16861 987 aaKnown RBP5.04□□□□□ -1.6
SRB5YGR104C CDC11P32458 415 aa5.04□□□□□ -1.6
SRB5YGR104C RPN12P32496 274 aa5.04□□□□□ -1.6
SRB5YGR104C SEC6P32844 805 aa5.04□□□□□ -1.6
SRB5YGR104C VPS24P36095 224 aaKnown RBP5.04□□□□□ -1.6
SRB5YGR104C YKR078WP36158 585 aaKnown RBP5.04□□□□□ -1.6
SRB5YGR104C SAH1P39954 449 aaKnown RBP5.04□□□□□ -1.6
SRB5YGR104C POB3Q04636 552 aaKnown RBP5.04□□□□□ -1.6
SRB5YGR104C YDR341CQ05506 607 aaKnown RBP5.04□□□□□ -1.6
SRB5YGR104C YKL151CP36059 337 aa5.03□□□□□ -1.6
SRB5YGR104C FUI1P38196 639 aa5.03□□□□□ -1.6
SRB5YGR104C ENP1P38333 483 aaKnown RBP5.03□□□□□ -1.6
SRB5YGR104C GIC1P38785 314 aa5.03□□□□□ -1.6
SRB5YGR104C HOS2P53096 452 aaPredicted RBP5.03□□□□□ -1.6
SRB5YGR104C MDM1Q01846 1127 aa5.03□□□□□ -1.6
SRB5YGR104C SHE9Q04172 456 aa5.03□□□□□ -1.6
SRB5YGR104C TRX2P22803 104 aaKnown RBP5.02□□□□□ -1.61
SRB5YGR104C CDC12P32468 407 aaKnown RBP5.02□□□□□ -1.61
SRB5YGR104C SRP40P32583 406 aaPredicted RBP5.02□□□□□ -1.61
SRB5YGR104C GRX7P38068 203 aa5.02□□□□□ -1.61
SRB5YGR104C CHS7P38843 316 aa5.02□□□□□ -1.61
SRB5YGR104C MSS4P38994 779 aa5.02□□□□□ -1.61
SRB5YGR104C DJP1P40564 432 aa5.02□□□□□ -1.61
SRB5YGR104C MAD1P40957 749 aa5.02□□□□□ -1.61
SRB5YGR104C PIN2Q12057 282 aa5.02□□□□□ -1.61
SRB5YGR104C KCS1Q12494 1050 aa5.02□□□□□ -1.61
SRB5YGR104C SWI3P32591 825 aa5.01□□□□□ -1.61
SRB5YGR104C SRP101P32916 621 aa5.01□□□□□ -1.61
SRB5YGR104C SEC27P41811 889 aaKnown RBP5.01□□□□□ -1.61
SRB5YGR104C FAA4P47912 694 aaKnown RBP5.01□□□□□ -1.61
SRB5YGR104C GYP7P48365 746 aa5.01□□□□□ -1.61
SRB5YGR104C FAL1Q12099 399 aaKnown RBP5.01□□□□□ -1.61
SRB5YGR104C DPB3P27344 201 aa5□□□□□ -1.61
SRB5YGR104C YKL091CP33324 310 aaKnown RBP5□□□□□ -1.61
SRB5YGR104C PES4P39684 611 aa5□□□□□ -1.61
SRB5YGR104C PEA2P40091 420 aa5□□□□□ -1.61
SRB5YGR104C NCS6P53088 359 aa5□□□□□ -1.61
SRB5YGR104C SLI1P53304 468 aa5□□□□□ -1.61
SRB5YGR104C RCF1Q03713 159 aa5□□□□□ -1.61
SRB5YGR104C CFT2Q12102 859 aaPredicted RBP5□□□□□ -1.61
SRB5YGR104C HSP42Q12329 375 aa5□□□□□ -1.61
SRB5YGR104C NPC2Q12408 173 aa5□□□□□ -1.61
SRB5YGR104C VPS5Q92331 675 aa5□□□□□ -1.61
SRB5YGR104C RAD53P22216 821 aa4.99□□□□□ -1.61
SRB5YGR104C HRR25P29295 494 aaKnown RBP4.99□□□□□ -1.61
SRB5YGR104C ABD1P32783 436 aaPredicted RBP4.99□□□□□ -1.61
SRB5YGR104C TFC3P34111 1160 aa4.99□□□□□ -1.61
SRB5YGR104C CWC24P53769 259 aa4.99□□□□□ -1.61
SRB5YGR104C KIN4Q01919 800 aa4.99□□□□□ -1.61
SRB5YGR104C APL5Q08951 932 aaKnown RBP4.99□□□□□ -1.61
SRB5YGR104C SPT7P35177 1332 aa4.98□□□□□ -1.61
SRB5YGR104C GUS1P46655 708 aaKnown RBP RIP-Chip data4.98□□□□□ -1.61not detected
SRB5YGR104C VPS16Q03308 798 aa4.98□□□□□ -1.61
SRB5YGR104C PRP3Q03338 469 aaPredicted RBP4.98□□□□□ -1.61
SRB5YGR104C VMS1Q04311 632 aaKnown RBP4.98□□□□□ -1.61
SRB5YGR104C DUS3Q06053 668 aaKnown RBP4.98□□□□□ -1.61
SRB5YGR104C JIP5Q06214 492 aaPredicted RBP4.98□□□□□ -1.61
SRB5YGR104C YSH1Q06224 779 aaPredicted RBP4.98□□□□□ -1.61
SRB5YGR104C CLF1Q12309 687 aaPredicted RBP4.98□□□□□ -1.61
SRB5YGR104C YGR161W-CQ3E744 92 aa4.98□□□□□ -1.61
SRB5YGR104C MRP8P35719 219 aa4.97□□□□□ -1.61
SRB5YGR104C OAR1P35731 278 aa4.97□□□□□ -1.61
SRB5YGR104C KTR4P38131 464 aa4.97□□□□□ -1.61
SRB5YGR104C YBR238CP38330 731 aaKnown RBP4.97□□□□□ -1.61
SRB5YGR104C UBP12P39538 1254 aa4.97□□□□□ -1.61
SRB5YGR104C YER158CP40095 573 aa4.97□□□□□ -1.61
SRB5YGR104C GPI8P49018 411 aa4.97□□□□□ -1.61
SRB5YGR104C HEL2Q05580 639 aaKnown RBP4.97□□□□□ -1.61
SRB5YGR104C YPR196WQ06595 470 aa4.97□□□□□ -1.61
SRB5YGR104C CYB2P00175 591 aa4.96□□□□□ -1.62
SRB5YGR104C ADE8P04161 214 aa4.96□□□□□ -1.62
SRB5YGR104C CDC48P25694 835 aaKnown RBP4.96□□□□□ -1.62
SRB5YGR104C PPH3P32345 308 aa4.96□□□□□ -1.62
SRB5YGR104C MEP1P40260 492 aa4.96□□□□□ -1.62
SRB5YGR104C YJR142WP47173 342 aa4.96□□□□□ -1.62
SRB5YGR104C RAI1P53063 387 aaKnown RBP4.96□□□□□ -1.62
SRB5YGR104C VPS30Q02948 557 aa4.96□□□□□ -1.62
SRB5YGR104C NOP58Q12499 511 aaKnown RBP4.96□□□□□ -1.62
SRB5YGR104C SED4P25365 1065 aa4.95□□□□□ -1.62
SRB5YGR104C RAD51P25454 400 aa4.95□□□□□ -1.62
SRB5YGR104C BRF1P29056 596 aa4.95□□□□□ -1.62
SRB5YGR104C EFT1P32324 842 aaKnown RBP4.95□□□□□ -1.62
SRB5YGR104C VBA5P36172 582 aa4.95□□□□□ -1.62
SRB5YGR104C PBY1P38254 753 aa4.95□□□□□ -1.62
SRB5YGR104C MBP1P39678 833 aa4.95□□□□□ -1.62
SRB5YGR104C VAC8P39968 578 aa4.95□□□□□ -1.62
SRB5YGR104C SIT1P39980 628 aa4.95□□□□□ -1.62
SRB5YGR104C SEC9P40357 651 aa4.95□□□□□ -1.62
SRB5YGR104C BFA1P47113 574 aa4.95□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms