RNA–Protein interactions for RNA: YGL007W

BRP1, Transcript of Dubious ORF located in the upstream region of PMA1, yeastyeast

Gene BRP1, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRP1YGL007W SNF3P10870 884 aa2.62□□□□□ -1.99
BRP1YGL007W CYC8P14922 966 aa2.62□□□□□ -1.99
BRP1YGL007W SEC18P18759 758 aaKnown RBP2.62□□□□□ -1.99
BRP1YGL007W RIM11P38615 370 aa2.62□□□□□ -1.99
BRP1YGL007W TAT2P38967 592 aa2.62□□□□□ -1.99
BRP1YGL007W YIL092WP40497 633 aa2.62□□□□□ -1.99
BRP1YGL007W BUD6P41697 788 aa2.62□□□□□ -1.99
BRP1YGL007W YFH7P43591 353 aa2.62□□□□□ -1.99
BRP1YGL007W CWC24P53769 259 aa2.62□□□□□ -1.99
BRP1YGL007W TPP1Q03796 238 aa2.62□□□□□ -1.99
BRP1YGL007W ACK1Q07622 623 aaPredicted RBP2.62□□□□□ -1.99
BRP1YGL007W CDC45Q08032 650 aa2.62□□□□□ -1.99
BRP1YGL007W PUS7Q08647 676 aaKnown RBP2.62□□□□□ -1.99
BRP1YGL007W PUS9Q12069 462 aa2.62□□□□□ -1.99
BRP1YGL007W PSF3Q12146 194 aa2.62□□□□□ -1.99
BRP1YGL007W SNU66Q12420 587 aaPredicted RBP2.62□□□□□ -1.99
BRP1YGL007W RVB2Q12464 471 aaKnown RBP2.62□□□□□ -1.99
BRP1YGL007W CMR1Q12510 522 aaKnown RBP2.62□□□□□ -1.99
BRP1YGL007W TAO3P40468 2376 aa2.62□□□□□ -1.99
BRP1YGL007W FAS2P19097 1887 aaKnown RBP2.62□□□□□ -1.99
BRP1YGL007W RAD2P07276 1031 aa2.61□□□□□ -1.99
BRP1YGL007W GCD7P32502 381 aaPredicted RBP2.61□□□□□ -1.99
BRP1YGL007W RPT3P33298 428 aaKnown RBP2.61□□□□□ -1.99
BRP1YGL007W VPS35P34110 944 aa2.61□□□□□ -1.99
BRP1YGL007W APE3P37302 537 aaKnown RBP2.61□□□□□ -1.99
BRP1YGL007W ECM2P38241 364 aaKnown RBP2.61□□□□□ -1.99
BRP1YGL007W KEL1P38853 1164 aaKnown RBP2.61□□□□□ -1.99
BRP1YGL007W NCS6P53088 359 aa2.61□□□□□ -1.99
BRP1YGL007W YRB30P53107 440 aaPredicted RBP2.61□□□□□ -1.99
BRP1YGL007W ALG12P53730 551 aa2.61□□□□□ -1.99
BRP1YGL007W HKR1P41809 1802 aa2.61□□□□□ -1.99
BRP1YGL007W HXK1P04806 485 aaKnown RBP2.6□□□□□ -1.99
BRP1YGL007W DAL5P15365 543 aa2.6□□□□□ -1.99
BRP1YGL007W PRI2P20457 528 aa2.6□□□□□ -1.99
BRP1YGL007W RAD53P22216 821 aa2.6□□□□□ -1.99
BRP1YGL007W TRM2P33753 639 aa2.6□□□□□ -1.99
BRP1YGL007W PTK1P36002 662 aaPredicted RBP2.6□□□□□ -1.99
BRP1YGL007W KTR3P38130 404 aaPredicted RBP2.6□□□□□ -1.99
BRP1YGL007W FAA3P39002 694 aa2.6□□□□□ -1.99
BRP1YGL007W YIR042CP40586 236 aa2.6□□□□□ -1.99
BRP1YGL007W HUL5P53119 910 aa2.6□□□□□ -1.99
BRP1YGL007W SLI1P53304 468 aa2.6□□□□□ -1.99
BRP1YGL007W YNL193WP53870 558 aa2.6□□□□□ -1.99
BRP1YGL007W RSC4Q02206 625 aa2.6□□□□□ -1.99
BRP1YGL007W RBA50Q04418 439 aa2.6□□□□□ -1.99
BRP1YGL007W RPN7Q06103 429 aaKnown RBP2.6□□□□□ -1.99
BRP1YGL007W PPM2Q08282 695 aa2.6□□□□□ -1.99
BRP1YGL007W CDC53Q12018 815 aaKnown RBP2.6□□□□□ -1.99
BRP1YGL007W SSF2Q12153 453 aaPredicted RBP2.6□□□□□ -1.99
BRP1YGL007W PIF1P07271 859 aa2.59□□□□□ -1.99
BRP1YGL007W SAM35P14693 329 aa2.59□□□□□ -1.99
BRP1YGL007W STI1P15705 589 aaKnown RBP RIP-Chip data2.59□□□□□ -1.99not detected
BRP1YGL007W PFK2P16862 959 aaKnown RBP RIP-Chip data2.59□□□□□ -1.99not detected
BRP1YGL007W UGA4P32837 571 aa2.59□□□□□ -1.99
BRP1YGL007W PRS1P32895 427 aaKnown RBP2.59□□□□□ -1.99
BRP1YGL007W DUR3P33413 735 aa2.59□□□□□ -1.99
BRP1YGL007W PBP2P38151 413 aaKnown RBP RIP-Chip data2.59□□□□□ -1.99not detected
BRP1YGL007W YHL012WP38709 493 aa2.59□□□□□ -1.99
BRP1YGL007W YNG2P38806 282 aaKnown RBP2.59□□□□□ -1.99
BRP1YGL007W NOP2P40991 618 aaKnown RBP2.59□□□□□ -1.99
BRP1YGL007W FAA4P47912 694 aaKnown RBP2.59□□□□□ -1.99
BRP1YGL007W MSE1P48525 536 aa2.59□□□□□ -1.99
BRP1YGL007W SPT20P50875 604 aa2.59□□□□□ -1.99
BRP1YGL007W UFD2P54860 961 aa2.59□□□□□ -1.99
BRP1YGL007W CDC55Q00362 526 aa2.59□□□□□ -1.99
BRP1YGL007W RMD1Q03441 430 aa2.59□□□□□ -1.99
BRP1YGL007W RPN4Q03465 531 aa2.59□□□□□ -1.99
BRP1YGL007W INM2Q05533 292 aa2.59□□□□□ -1.99
BRP1YGL007W YOR352WQ08816 343 aa2.59□□□□□ -1.99
BRP1YGL007W CYB2P00175 591 aa2.58□□□□□ -2
BRP1YGL007W CLN2P20438 545 aa2.58□□□□□ -2
BRP1YGL007W TSR4P25040 408 aa2.58□□□□□ -2
BRP1YGL007W AIM26P32858 118 aa2.58□□□□□ -2
BRP1YGL007W MDL2P33311 773 aa2.58□□□□□ -2
BRP1YGL007W PET112P33893 541 aa2.58□□□□□ -2
BRP1YGL007W GRX7P38068 203 aa2.58□□□□□ -2
BRP1YGL007W ARL1P38116 183 aaKnown RBP2.58□□□□□ -2
BRP1YGL007W MRPS18P42847 217 aa2.58□□□□□ -2
BRP1YGL007W SAM37P50110 327 aa2.58□□□□□ -2
BRP1YGL007W YGL242CP53066 181 aa2.58□□□□□ -2
BRP1YGL007W SPO1P53541 631 aa2.58□□□□□ -2
BRP1YGL007W UBP3Q01477 912 aaKnown RBP RIP-Chip data2.58□□□□□ -2not detected
BRP1YGL007W GDE1Q02979 1223 aa2.58□□□□□ -2
BRP1YGL007W YDR132CQ03900 495 aa2.58□□□□□ -2
BRP1YGL007W DAL4Q04895 635 aa2.58□□□□□ -2
BRP1YGL007W UBX5Q06682 500 aa2.58□□□□□ -2
BRP1YGL007W NOC3Q07896 663 aaPredicted RBP2.58□□□□□ -2
BRP1YGL007W OXR1Q08952 273 aa2.58□□□□□ -2
BRP1YGL007W PCL8Q08966 492 aa2.58□□□□□ -2
BRP1YGL007W PMA1P05030 918 aaKnown RBP2.57□□□□□ -2
BRP1YGL007W GCR1P07261 785 aa2.57□□□□□ -2
BRP1YGL007W GCD6P32501 712 aaKnown RBP2.57□□□□□ -2
BRP1YGL007W TOM20P35180 183 aa2.57□□□□□ -2
BRP1YGL007W MNR2P35724 969 aa2.57□□□□□ -2
BRP1YGL007W RRP14P36080 434 aaKnown RBP2.57□□□□□ -2
BRP1YGL007W YKL069WP36088 180 aa2.57□□□□□ -2
BRP1YGL007W NMD3P38861 518 aaKnown RBP2.57□□□□□ -2
BRP1YGL007W NET1P47035 1189 aa2.57□□□□□ -2
BRP1YGL007W RTS3P53289 263 aa2.57□□□□□ -2
BRP1YGL007W YLR225CQ05948 407 aaKnown RBP2.57□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 35.3 ms