RNA–Protein interactions for RNA: YFL009W

CDC4, Transcript of F-box protein required for both the G1/S and G2/M phase transitions, yeastyeast

Gene CDC4, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC4YFL009W XDJ1P39102 459 aa5.38□□□□□ -1.55
CDC4YFL009W DLD3P39976 496 aaKnown RBP5.38□□□□□ -1.55
CDC4YFL009W VID27P40157 782 aa5.38□□□□□ -1.55
CDC4YFL009W MSB3P48566 633 aaPredicted RBP5.38□□□□□ -1.55
CDC4YFL009W YKE2P52553 114 aa5.38□□□□□ -1.55
CDC4YFL009W ARI1P53111 347 aaKnown RBP5.38□□□□□ -1.55
CDC4YFL009W SPC24Q04477 213 aa5.38□□□□□ -1.55
CDC4YFL009W SLX4Q12098 748 aa5.38□□□□□ -1.55
CDC4YFL009W SSF2Q12153 453 aaPredicted RBP5.38□□□□□ -1.55
CDC4YFL009W ADE3P07245 946 aaKnown RBP5.37□□□□□ -1.55
CDC4YFL009W MATALPHA2P0CY08 210 aa5.37□□□□□ -1.55
CDC4YFL009W HMLALPHA2P0CY09 210 aa5.37□□□□□ -1.55
CDC4YFL009W RAD53P22216 821 aa5.37□□□□□ -1.55
CDC4YFL009W SEC65P29478 273 aa5.37□□□□□ -1.55
CDC4YFL009W MRP8P35719 219 aa5.37□□□□□ -1.55
CDC4YFL009W ECM4P36156 370 aa5.37□□□□□ -1.55
CDC4YFL009W KTR3P38130 404 aaPredicted RBP5.37□□□□□ -1.55
CDC4YFL009W PSY2P40164 858 aa5.37□□□□□ -1.55
CDC4YFL009W TAF1P46677 1066 aa5.37□□□□□ -1.55
CDC4YFL009W SET2P46995 733 aaKnown RBP5.37□□□□□ -1.55
CDC4YFL009W MTO1P53070 669 aa5.37□□□□□ -1.55
CDC4YFL009W MLC1P53141 149 aa5.37□□□□□ -1.55
CDC4YFL009W YKU80Q04437 629 aa5.37□□□□□ -1.55
CDC4YFL009W NSE3Q05541 303 aa5.37□□□□□ -1.55
CDC4YFL009W YDR306CQ06640 478 aa5.37□□□□□ -1.55
CDC4YFL009W VAC14Q06708 880 aa5.37□□□□□ -1.55
CDC4YFL009W RPP2BP02400 110 aaKnown RBP5.37□□□□□ -1.55
CDC4YFL009W IME1P21190 360 aa5.37□□□□□ -1.55
CDC4YFL009W CDC48P25694 835 aaKnown RBP5.37□□□□□ -1.55
CDC4YFL009W UGA3P26370 528 aa5.37□□□□□ -1.55
CDC4YFL009W SEC66P33754 206 aa5.37□□□□□ -1.55
CDC4YFL009W DYS1P38791 387 aa5.37□□□□□ -1.55
CDC4YFL009W GVP36P40531 326 aaKnown RBP5.37□□□□□ -1.55
CDC4YFL009W SAP185P40856 1058 aa5.37□□□□□ -1.55
CDC4YFL009W SAM37P50110 327 aa5.37□□□□□ -1.55
CDC4YFL009W TFB2Q02939 513 aa5.37□□□□□ -1.55
CDC4YFL009W HCR1Q05775 265 aaKnown RBP5.37□□□□□ -1.55
CDC4YFL009W YLR407WQ06070 228 aa5.37□□□□□ -1.55
CDC4YFL009W YLR177WQ06251 628 aa5.37□□□□□ -1.55
CDC4YFL009W CIR2Q08822 631 aa5.37□□□□□ -1.55
CDC4YFL009W RPB2P08518 1224 aaKnown RBP5.36□□□□□ -1.55
CDC4YFL009W ADE2P21264 571 aaKnown RBP5.36□□□□□ -1.55
CDC4YFL009W SQT1P35184 431 aa5.36□□□□□ -1.55
CDC4YFL009W ERC1P38767 581 aa5.36□□□□□ -1.55
CDC4YFL009W LAM1P38851 1228 aa5.36□□□□□ -1.55
CDC4YFL009W SHC1P39000 512 aa5.36□□□□□ -1.55
CDC4YFL009W NUP60P39705 539 aa5.36□□□□□ -1.55
CDC4YFL009W NNF1P47149 201 aa5.36□□□□□ -1.55
CDC4YFL009W PRP43P53131 767 aaKnown RBP5.36□□□□□ -1.55
CDC4YFL009W FMP30Q02883 468 aa5.36□□□□□ -1.55
CDC4YFL009W MMR1Q06324 491 aa5.36□□□□□ -1.55
CDC4YFL009W INP54Q08227 384 aaKnown RBP5.36□□□□□ -1.55
CDC4YFL009W RMP1Q12530 201 aa5.36□□□□□ -1.55
CDC4YFL009W TY1B-NL2Q99337 1749 aaKnown RBP5.36□□□□□ -1.55
CDC4YFL009W PGI1P12709 554 aaKnown RBP5.36□□□□□ -1.55
CDC4YFL009W RGP1P16664 663 aa5.36□□□□□ -1.55
CDC4YFL009W AFT1P22149 690 aa5.36□□□□□ -1.55
CDC4YFL009W PDC6P26263 563 aaKnown RBP5.36□□□□□ -1.55
CDC4YFL009W DUT1P33317 147 aa5.36□□□□□ -1.55
CDC4YFL009W LOS1P33418 1100 aaPredicted RBP5.36□□□□□ -1.55
CDC4YFL009W IRS4P36115 615 aaKnown RBP5.36□□□□□ -1.55
CDC4YFL009W NUP133P36161 1157 aa5.36□□□□□ -1.55
CDC4YFL009W ADE17P38009 592 aaKnown RBP5.36□□□□□ -1.55
CDC4YFL009W AMN1P38285 549 aaPredicted RBP5.36□□□□□ -1.55
CDC4YFL009W MCX1P38323 520 aaPredicted RBP5.36□□□□□ -1.55
CDC4YFL009W LSG1P53145 640 aaKnown RBP5.36□□□□□ -1.55
CDC4YFL009W BTN2P53286 410 aa5.36□□□□□ -1.55
CDC4YFL009W SUB1P54000 292 aaKnown RBP5.36□□□□□ -1.55
CDC4YFL009W ZDS2P54786 942 aa5.36□□□□□ -1.55
CDC4YFL009W BET4Q00618 327 aa5.36□□□□□ -1.55
CDC4YFL009W POB3Q04636 552 aaKnown RBP5.36□□□□□ -1.55
CDC4YFL009W EMG1Q06287 252 aaKnown RBP5.36□□□□□ -1.55
CDC4YFL009W SPN1Q06505 410 aaPredicted RBP5.36□□□□□ -1.55
CDC4YFL009W AFT2Q08957 416 aa5.36□□□□□ -1.55
CDC4YFL009W FLP1P03870 423 aa5.35□□□□□ -1.55
CDC4YFL009W IRE1P32361 1115 aa5.35□□□□□ -1.55
CDC4YFL009W NIP1P32497 812 aaKnown RBP5.35□□□□□ -1.55
CDC4YFL009W KAP122P32767 1081 aa5.35□□□□□ -1.55
CDC4YFL009W GFD1Q04839 188 aaKnown RBP5.35□□□□□ -1.55
CDC4YFL009W MET7Q08645 548 aa5.35□□□□□ -1.55
CDC4YFL009W GPN2Q08726 347 aaPredicted RBP5.35□□□□□ -1.55
CDC4YFL009W CFT2Q12102 859 aaPredicted RBP5.35□□□□□ -1.55
CDC4YFL009W IES3Q12345 250 aa5.35□□□□□ -1.55
CDC4YFL009W CDC8P00572 216 aa5.35□□□□□ -1.55
CDC4YFL009W PET122P10355 254 aa5.35□□□□□ -1.55
CDC4YFL009W PAP1P29468 568 aaKnown RBP5.35□□□□□ -1.55
CDC4YFL009W SAC6P32599 642 aaKnown RBP5.35□□□□□ -1.55
CDC4YFL009W EFM4P40516 257 aa5.35□□□□□ -1.55
CDC4YFL009W EPL1P43572 832 aa5.35□□□□□ -1.55
CDC4YFL009W ENP2P48234 707 aaKnown RBP5.35□□□□□ -1.55
CDC4YFL009W ADA2Q02336 434 aa5.35□□□□□ -1.55
CDC4YFL009W YOR296WQ08748 1289 aa5.35□□□□□ -1.55
CDC4YFL009W LEU1P07264 779 aaKnown RBP5.34□□□□□ -1.55
CDC4YFL009W CDC4P07834 779 aa5.34□□□□□ -1.55
CDC4YFL009W DAL1P32375 460 aa5.34□□□□□ -1.55
CDC4YFL009W EFM2P38347 419 aa5.34□□□□□ -1.55
CDC4YFL009W SYG1P40528 902 aa5.34□□□□□ -1.55
CDC4YFL009W YNL247WP53852 767 aaKnown RBP5.34□□□□□ -1.55
CDC4YFL009W ERG5P54781 538 aa5.34□□□□□ -1.55
CDC4YFL009W ESF1Q06344 628 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms