RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W GIC1P38785 314 aa6.03□□□□□ -1.44
UBC6YER100W PIK1P39104 1066 aa6.03□□□□□ -1.44
UBC6YER100W ACO2P39533 789 aa6.03□□□□□ -1.44
UBC6YER100W YGR153WP48238 217 aa6.03□□□□□ -1.44
UBC6YER100W ALT1P52893 592 aa6.03□□□□□ -1.44
UBC6YER100W AIM14P53109 570 aa6.03□□□□□ -1.44
UBC6YER100W NOG2P53742 486 aaKnown RBP6.03□□□□□ -1.44
UBC6YER100W ECM9Q02202 377 aa6.03□□□□□ -1.44
UBC6YER100W SKY1Q03656 742 aa6.03□□□□□ -1.44
UBC6YER100W YDR338CQ05497 695 aa6.03□□□□□ -1.44
UBC6YER100W COG4Q06096 861 aa6.03□□□□□ -1.44
UBC6YER100W PUS7Q08647 676 aaKnown RBP6.03□□□□□ -1.44
UBC6YER100W COQ4O13525 335 aa6.02□□□□□ -1.45
UBC6YER100W ENA1P13587 1091 aa6.02□□□□□ -1.45
UBC6YER100W MIH1P23748 554 aa6.02□□□□□ -1.45
UBC6YER100W HSL7P38274 827 aa6.02□□□□□ -1.45
UBC6YER100W NPP2P39997 493 aa6.02□□□□□ -1.45
UBC6YER100W DOT6P40059 670 aaKnown RBP6.02□□□□□ -1.45
UBC6YER100W ENA2Q01896 1091 aa6.02□□□□□ -1.45
UBC6YER100W BRE1Q07457 700 aaKnown RBP6.02□□□□□ -1.45
UBC6YER100W ENA5Q12691 1091 aa6.02□□□□□ -1.45
UBC6YER100W YKL222CP35995 705 aa6.01□□□□□ -1.45
UBC6YER100W TDA3P38758 523 aa6.01□□□□□ -1.45
UBC6YER100W VPS27P40343 622 aaKnown RBP6.01□□□□□ -1.45
UBC6YER100W SLD3P53135 668 aa6.01□□□□□ -1.45
UBC6YER100W SRO9P25567 434 aaKnown RBP6□□□□□ -1.45
UBC6YER100W GPT2P36148 743 aa6□□□□□ -1.45
UBC6YER100W YHL041WP38730 149 aa6□□□□□ -1.45
UBC6YER100W RLP7P40693 322 aaKnown RBP6□□□□□ -1.45
UBC6YER100W YFL054CP43549 646 aa6□□□□□ -1.45
UBC6YER100W ALY2P47029 1046 aa6□□□□□ -1.45
UBC6YER100W TAD1P53065 400 aa6□□□□□ -1.45
UBC6YER100W TAN1P53072 289 aaPredicted RBP6□□□□□ -1.45
UBC6YER100W TPP1Q03796 238 aa6□□□□□ -1.45
UBC6YER100W PEX15Q08215 383 aa6□□□□□ -1.45
UBC6YER100W HFI1Q12060 488 aa6□□□□□ -1.45
UBC6YER100W COX11P19516 300 aaKnown RBP5.99□□□□□ -1.45
UBC6YER100W ACE2P21192 770 aa5.99□□□□□ -1.45
UBC6YER100W RPA135P22138 1203 aaKnown RBP5.99□□□□□ -1.45
UBC6YER100W SSH4P32343 579 aa5.99□□□□□ -1.45
UBC6YER100W MFT1P33441 392 aaKnown RBP5.99□□□□□ -1.45
UBC6YER100W CCZ1P38273 704 aa5.99□□□□□ -1.45
UBC6YER100W HXT6P39003 570 aaKnown RBP5.99□□□□□ -1.45
UBC6YER100W HXT7P39004 570 aa5.99□□□□□ -1.45
UBC6YER100W NOC2P39744 710 aaKnown RBP5.99□□□□□ -1.45
UBC6YER100W YIR007WP40566 764 aa5.99□□□□□ -1.45
UBC6YER100W TY1A-NL1Q12391 440 aaKnown RBP5.99□□□□□ -1.45
UBC6YER100W YBR182C-AQ8TGU6 64 aa5.99□□□□□ -1.45
UBC6YER100W DAL7P21826 554 aa5.98□□□□□ -1.45
UBC6YER100W DAL3P32459 195 aa5.98□□□□□ -1.45
UBC6YER100W RPN12P32496 274 aa5.98□□□□□ -1.45
UBC6YER100W MDJ1P35191 511 aa5.98□□□□□ -1.45
UBC6YER100W VID27P40157 782 aa5.98□□□□□ -1.45
UBC6YER100W SAP185P40856 1058 aa5.98□□□□□ -1.45
UBC6YER100W CNM67P53865 581 aaKnown RBP5.98□□□□□ -1.45
UBC6YER100W YDR444WQ04093 687 aa5.98□□□□□ -1.45
UBC6YER100W HSC82P15108 705 aaKnown RBP5.97□□□□□ -1.45
UBC6YER100W ACA1P39970 489 aa5.97□□□□□ -1.45
UBC6YER100W HIS6P40545 261 aa5.97□□□□□ -1.45
UBC6YER100W ENV11P53246 860 aa5.97□□□□□ -1.45
UBC6YER100W SFB2P53953 876 aa5.97□□□□□ -1.45
UBC6YER100W PTA1Q01329 785 aaPredicted RBP5.97□□□□□ -1.45
UBC6YER100W YPR027CQ12079 277 aa5.97□□□□□ -1.45
UBC6YER100W RRI2Q12348 645 aa5.97□□□□□ -1.45
UBC6YER100W DIF1O13577 133 aa5.96□□□□□ -1.46
UBC6YER100W MSS18P08593 268 aa5.96□□□□□ -1.46
UBC6YER100W RPS4AP0CX35 261 aaKnown RBP5.96□□□□□ -1.46
UBC6YER100W RPS4BP0CX36 261 aaKnown RBP5.96□□□□□ -1.46
UBC6YER100W RFA1P22336 621 aaKnown RBP5.96□□□□□ -1.46
UBC6YER100W URA1P28272 314 aaPredicted RBP5.96□□□□□ -1.46
UBC6YER100W SFA1P32771 386 aa5.96□□□□□ -1.46
UBC6YER100W OAF3P36023 863 aa5.96□□□□□ -1.46
UBC6YER100W NMD3P38861 518 aaKnown RBP5.96□□□□□ -1.46
UBC6YER100W JJJ3P47138 172 aa5.96□□□□□ -1.46
UBC6YER100W ESF2P53743 316 aaKnown RBP5.96□□□□□ -1.46
UBC6YER100W LRS4Q04087 347 aaKnown RBP5.96□□□□□ -1.46
UBC6YER100W RCL1Q08096 367 aaPredicted RBP5.96□□□□□ -1.46
UBC6YER100W YDL176WQ12027 708 aa5.96□□□□□ -1.46
UBC6YER100W SAM35P14693 329 aa5.95□□□□□ -1.46
UBC6YER100W DBF20P32328 564 aa5.95□□□□□ -1.46
UBC6YER100W MDL2P33311 773 aa5.95□□□□□ -1.46
UBC6YER100W YKR018CP36114 725 aa5.95□□□□□ -1.46
UBC6YER100W MAL31P38156 614 aa5.95□□□□□ -1.46
UBC6YER100W EXO84P38261 753 aa5.95□□□□□ -1.46
UBC6YER100W RRM3P38766 723 aa5.95□□□□□ -1.46
UBC6YER100W YAP1801P38856 637 aa5.95□□□□□ -1.46
UBC6YER100W SET5P38890 526 aaKnown RBP5.95□□□□□ -1.46
UBC6YER100W BNA2P47125 453 aa5.95□□□□□ -1.46
UBC6YER100W UBC9P50623 157 aaPredicted RBP5.95□□□□□ -1.46
UBC6YER100W YPR196WQ06595 470 aa5.95□□□□□ -1.46
UBC6YER100W OSW2Q12202 724 aa5.95□□□□□ -1.46
UBC6YER100W RPS21AP0C0V8 87 aaKnown RBP5.94□□□□□ -1.46
UBC6YER100W PHO81P17442 1178 aa5.94□□□□□ -1.46
UBC6YER100W YKU70P32807 602 aa5.94□□□□□ -1.46
UBC6YER100W KTR4P38131 464 aa5.94□□□□□ -1.46
UBC6YER100W ECM21P38167 1117 aaKnown RBP5.94□□□□□ -1.46
UBC6YER100W YHL012WP38709 493 aa5.94□□□□□ -1.46
UBC6YER100W QRI7P43122 407 aa5.94□□□□□ -1.46
UBC6YER100W TAF1P46677 1066 aa5.94□□□□□ -1.46
UBC6YER100W HFM1P51979 1187 aa5.94□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 72.3 ms