RNA–Protein interactions for RNA: YDR420W

HKR1, Transcript of Mucin family member that functions as an osmosensor in the HOG pathway, yeastyeast

Gene HKR1, Length 5,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HKR1YDR420W SIT4P20604 311 aa1.49□□□□□ -2.17
HKR1YDR420W PHO87P25360 923 aa1.49□□□□□ -2.17
HKR1YDR420W MET4P32389 672 aa1.49□□□□□ -2.17
HKR1YDR420W RTG2P32608 588 aaKnown RBP1.49□□□□□ -2.17
HKR1YDR420W CAF4P36130 643 aa1.49□□□□□ -2.17
HKR1YDR420W MAK5P38112 773 aaPredicted RBP1.49□□□□□ -2.17
HKR1YDR420W VPS29P38759 282 aa1.49□□□□□ -2.17
HKR1YDR420W PDS1P40316 373 aaPredicted RBP1.49□□□□□ -2.17
HKR1YDR420W UTP25P40498 721 aaKnown RBP1.49□□□□□ -2.17
HKR1YDR420W SAD1P43589 448 aa1.49□□□□□ -2.17
HKR1YDR420W UBP6P43593 499 aaKnown RBP1.49□□□□□ -2.17
HKR1YDR420W ALB1P47019 175 aaPredicted RBP1.49□□□□□ -2.17
HKR1YDR420W POL32P47110 350 aa1.49□□□□□ -2.17
HKR1YDR420W YDL183CP48569 320 aa1.49□□□□□ -2.17
HKR1YDR420W YNL193WP53870 558 aa1.49□□□□□ -2.17
HKR1YDR420W EOS1P53938 366 aa1.49□□□□□ -2.17
HKR1YDR420W CIK1Q01649 594 aa1.49□□□□□ -2.17
HKR1YDR420W CLU1Q03690 1277 aaKnown RBP1.49□□□□□ -2.17
HKR1YDR420W PDR8Q06149 701 aa1.49□□□□□ -2.17
HKR1YDR420W MCM21Q06675 368 aa1.49□□□□□ -2.17
HKR1YDR420W RTT109Q07794 436 aa1.49□□□□□ -2.17
HKR1YDR420W LAM6Q08001 693 aa1.49□□□□□ -2.17
HKR1YDR420W DPH6Q12429 685 aa1.49□□□□□ -2.17
HKR1YDR420W NUP192P47054 1683 aa1.48□□□□□ -2.17
HKR1YDR420W PSK1P31374 1356 aa1.48□□□□□ -2.17
HKR1YDR420W SCP160P06105 1222 aaKnown RBP RIP-Chip data1.48□□□□□ -2.17not detected
HKR1YDR420W SIR3P06701 978 aa1.48□□□□□ -2.17
HKR1YDR420W PRP5P21372 849 aaPredicted RBP1.48□□□□□ -2.17
HKR1YDR420W SRM1P21827 482 aa1.48□□□□□ -2.17
HKR1YDR420W AFT1P22149 690 aa1.48□□□□□ -2.17
HKR1YDR420W PRP22P24384 1145 aaKnown RBP1.48□□□□□ -2.17
HKR1YDR420W YPT52P36018 234 aaKnown RBP1.48□□□□□ -2.17
HKR1YDR420W YKL133CP36066 463 aa1.48□□□□□ -2.17
HKR1YDR420W SSO2P39926 295 aa1.48□□□□□ -2.17
HKR1YDR420W RTT105P40063 208 aa1.48□□□□□ -2.17
HKR1YDR420W SEC9P40357 651 aa1.48□□□□□ -2.17
HKR1YDR420W REF2P42073 533 aaPredicted RBP1.48□□□□□ -2.17
HKR1YDR420W UBP15P50101 1230 aa1.48□□□□□ -2.17
HKR1YDR420W ASE1P50275 885 aa1.48□□□□□ -2.17
HKR1YDR420W LIF1P53150 421 aa1.48□□□□□ -2.17
HKR1YDR420W COP1P53622 1201 aaKnown RBP1.48□□□□□ -2.17
HKR1YDR420W ALG12P53730 551 aa1.48□□□□□ -2.17
HKR1YDR420W DUS1P53759 423 aaKnown RBP1.48□□□□□ -2.17
HKR1YDR420W DNM1P54861 757 aa1.48□□□□□ -2.17
HKR1YDR420W GIS4Q04233 774 aa1.48□□□□□ -2.17
HKR1YDR420W MCP2Q06567 569 aa1.48□□□□□ -2.17
HKR1YDR420W GPN2Q08726 347 aaPredicted RBP1.48□□□□□ -2.17
HKR1YDR420W RKM4Q12504 494 aa1.48□□□□□ -2.17
HKR1YDR420W LAM4P38800 1345 aa1.48□□□□□ -2.17
HKR1YDR420W SSM4P40318 1319 aa1.48□□□□□ -2.17
HKR1YDR420W NUP145P49687 1317 aa1.48□□□□□ -2.17
HKR1YDR420W FOB1O13329 566 aa1.48□□□□□ -2.17
HKR1YDR420W RPP0P05317 312 aaKnown RBP1.48□□□□□ -2.17
HKR1YDR420W VAS1P07806 1104 aaKnown RBP1.48□□□□□ -2.17
HKR1YDR420W PBS2P08018 668 aa1.48□□□□□ -2.17
HKR1YDR420W MPH3P0CE00 602 aa1.48□□□□□ -2.17
HKR1YDR420W RAP1P11938 827 aa1.48□□□□□ -2.17
HKR1YDR420W TAL1P15019 335 aaKnown RBP1.48□□□□□ -2.17
HKR1YDR420W POL30P15873 258 aaKnown RBP1.48□□□□□ -2.17
HKR1YDR420W VMA1P17255 1071 aaKnown RBP1.48□□□□□ -2.17
HKR1YDR420W MRPS28P21771 286 aa1.48□□□□□ -2.17
HKR1YDR420W KIN3P22209 435 aa1.48□□□□□ -2.17
HKR1YDR420W DBP1P24784 617 aaKnown RBP1.48□□□□□ -2.17
HKR1YDR420W FBP26P32604 452 aa1.48□□□□□ -2.17
HKR1YDR420W SEC8P32855 1065 aa1.48□□□□□ -2.17
HKR1YDR420W PRP40P33203 583 aaKnown RBP1.48□□□□□ -2.17
HKR1YDR420W BMH2P34730 273 aaKnown RBP1.48□□□□□ -2.17
HKR1YDR420W NUP120P35729 1037 aa1.48□□□□□ -2.17
HKR1YDR420W FMP23P38231 175 aa1.48□□□□□ -2.17
HKR1YDR420W UBP14P38237 781 aaKnown RBP1.48□□□□□ -2.17
HKR1YDR420W SLI15P38283 698 aa1.48□□□□□ -2.17
HKR1YDR420W FTH1P38310 465 aa1.48□□□□□ -2.17
HKR1YDR420W KIC1P38692 1080 aa1.48□□□□□ -2.17
HKR1YDR420W RRM3P38766 723 aa1.48□□□□□ -2.17
HKR1YDR420W MNN1P39106 762 aa1.48□□□□□ -2.17
HKR1YDR420W CIN4P39110 191 aa1.48□□□□□ -2.17
HKR1YDR420W YHB1P39676 399 aaKnown RBP1.48□□□□□ -2.17
HKR1YDR420W LCP5P40079 357 aaPredicted RBP1.48□□□□□ -2.17
HKR1YDR420W YER137CP40083 148 aaKnown RBP1.48□□□□□ -2.17
HKR1YDR420W PSY2P40164 858 aa1.48□□□□□ -2.17
HKR1YDR420W MEP1P40260 492 aa1.48□□□□□ -2.17
HKR1YDR420W ESL1P40456 1118 aa1.48□□□□□ -2.17
HKR1YDR420W AXL1P40851 1208 aa1.48□□□□□ -2.17
HKR1YDR420W ZIM17P42844 174 aa1.48□□□□□ -2.17
HKR1YDR420W CIT3P43635 486 aa1.48□□□□□ -2.17
HKR1YDR420W STR2P47164 639 aa1.48□□□□□ -2.17
HKR1YDR420W PUS4P48567 403 aaKnown RBP1.48□□□□□ -2.17
HKR1YDR420W MNP1P53163 194 aaPredicted RBP1.48□□□□□ -2.17
HKR1YDR420W YGR054WP53235 642 aaKnown RBP1.48□□□□□ -2.17
HKR1YDR420W YGR111WP53265 400 aa1.48□□□□□ -2.17
HKR1YDR420W FOX2Q02207 900 aaKnown RBP1.48□□□□□ -2.17
HKR1YDR420W SRL4Q03085 281 aa1.48□□□□□ -2.17
HKR1YDR420W ATG13Q06628 738 aa1.48□□□□□ -2.17
HKR1YDR420W DIN7Q12086 430 aa1.48□□□□□ -2.17
HKR1YDR420W MED4Q12343 284 aa1.48□□□□□ -2.17
HKR1YDR420W SPO21Q12411 609 aa1.48□□□□□ -2.17
HKR1YDR420W YOL087CQ99247 1116 aa1.48□□□□□ -2.17
HKR1YDR420W SEC7P11075 2009 aaKnown RBP1.48□□□□□ -2.17
HKR1YDR420W SEC15P22224 910 aa1.48□□□□□ -2.17
HKR1YDR420W SRB8P25648 1427 aa1.48□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 169.6 ms