RNA–Protein interactions for RNA: YDR348C

PAL1, Transcript of Protein of unknown function thought to be involved in endocytosis, yeast

Gene PAL1, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAL1	YDR348C	APL5	Q08951	932 aa	Known RBP	5.38	□□□□□ -1.55
PAL1	YDR348C	NFI1	Q12216	726 aa		5.38	□□□□□ -1.55
PAL1	YDR348C	SRF1	Q12516	437 aa		5.38	□□□□□ -1.55
PAL1	YDR348C	FKS3	Q04952	1785 aa		5.37	□□□□□ -1.55
PAL1	YDR348C	GFA1	P14742	717 aa	Known RBP	5.37	□□□□□ -1.55
PAL1	YDR348C	TAL1	P15019	335 aa	Known RBP	5.37	□□□□□ -1.55
PAL1	YDR348C	TYR1	P20049	452 aa		5.37	□□□□□ -1.55
PAL1	YDR348C	CBP3	P21560	335 aa		5.37	□□□□□ -1.55
PAL1	YDR348C	OPI1	P21957	404 aa		5.37	□□□□□ -1.55
PAL1	YDR348C	GCG1	P32656	232 aa	Known RBP	5.37	□□□□□ -1.55
PAL1	YDR348C	STE13	P33894	931 aa		5.37	□□□□□ -1.55
PAL1	YDR348C	OSH3	P38713	996 aa	Known RBP	5.37	□□□□□ -1.55
PAL1	YDR348C	TDA11	P38854	504 aa		5.37	□□□□□ -1.55
PAL1	YDR348C	YRB1	P41920	201 aa	Known RBP	5.37	□□□□□ -1.55
PAL1	YDR348C	MDJ2	P42834	146 aa		5.37	□□□□□ -1.55
PAL1	YDR348C	IES1	P43579	692 aa		5.37	□□□□□ -1.55
PAL1	YDR348C	UBP6	P43593	499 aa	Known RBP	5.37	□□□□□ -1.55
PAL1	YDR348C	SUM1	P46676	1062 aa		5.37	□□□□□ -1.55
PAL1	YDR348C	SUB1	P54000	292 aa	Known RBP	5.37	□□□□□ -1.55
PAL1	YDR348C	RPT6	Q01939	405 aa	Known RBP	5.37	□□□□□ -1.55
PAL1	YDR348C	VPS64	Q03944	604 aa		5.37	□□□□□ -1.55
PAL1	YDR348C	YMR114C	Q04471	368 aa	Known RBP	5.37	□□□□□ -1.55
PAL1	YDR348C	BDF2	Q07442	638 aa		5.37	□□□□□ -1.55
PAL1	YDR348C	LAM4	P38800	1345 aa		5.37	□□□□□ -1.55
PAL1	YDR348C	CDC6	P09119	513 aa		5.36	□□□□□ -1.55
PAL1	YDR348C	VPS1	P21576	704 aa	Known RBP	5.36	□□□□□ -1.55
PAL1	YDR348C	YCR051W	P25631	222 aa		5.36	□□□□□ -1.55
PAL1	YDR348C	PDC6	P26263	563 aa	Known RBP	5.36	□□□□□ -1.55
PAL1	YDR348C	BMH1	P29311	267 aa	Known RBP	5.36	□□□□□ -1.55
PAL1	YDR348C	ASF1	P32447	279 aa		5.36	□□□□□ -1.55
PAL1	YDR348C	RPC25	P35718	212 aa		5.36	□□□□□ -1.55
PAL1	YDR348C	GCN20	P43535	752 aa	Known RBP	5.36	□□□□□ -1.55
PAL1	YDR348C	VTC2	P43585	828 aa		5.36	□□□□□ -1.55
PAL1	YDR348C	AIP1	P46680	615 aa	Known RBP	5.36	□□□□□ -1.55
PAL1	YDR348C	JJJ1	P53863	590 aa		5.36	□□□□□ -1.55
PAL1	YDR348C	VPS16	Q03308	798 aa		5.36	□□□□□ -1.55
PAL1	YDR348C	USA1	Q03714	838 aa		5.36	□□□□□ -1.55
PAL1	YDR348C	MRD1	Q06106	887 aa	Known RBP	5.36	□□□□□ -1.55
PAL1	YDR348C	MMR1	Q06324	491 aa		5.36	□□□□□ -1.55
PAL1	YDR348C	RGA2	Q06407	1009 aa		5.36	□□□□□ -1.55
PAL1	YDR348C	CSR1	Q06705	408 aa	Known RBP	5.36	□□□□□ -1.55
PAL1	YDR348C	MET7	Q08645	548 aa		5.36	□□□□□ -1.55
PAL1	YDR348C	TAF10	Q12030	206 aa		5.36	□□□□□ -1.55
PAL1	YDR348C	GET3	Q12154	354 aa	Known RBP	5.36	□□□□□ -1.55
PAL1	YDR348C	YLL054C	Q12244	843 aa		5.36	□□□□□ -1.55
PAL1	YDR348C	ARG82	P07250	355 aa		5.35	□□□□□ -1.55
PAL1	YDR348C	PPR1	P07272	904 aa	Predicted RBP	5.35	□□□□□ -1.55
PAL1	YDR348C	RPB2	P08518	1224 aa	Known RBP	5.35	□□□□□ -1.55
PAL1	YDR348C	BAS1	P22035	811 aa		5.35	□□□□□ -1.55
PAL1	YDR348C	CDC48	P25694	835 aa	Known RBP	5.35	□□□□□ -1.55
PAL1	YDR348C	MVD1	P32377	396 aa	Known RBP	5.35	□□□□□ -1.55
PAL1	YDR348C	HXT1	P32465	570 aa		5.35	□□□□□ -1.55
PAL1	YDR348C	BOI1	P38041	980 aa	Known RBP	5.35	□□□□□ -1.55
PAL1	YDR348C	GRX7	P38068	203 aa		5.35	□□□□□ -1.55
PAL1	YDR348C	EXO84	P38261	753 aa		5.35	□□□□□ -1.55
PAL1	YDR348C	BCD1	P38772	366 aa		5.35	□□□□□ -1.55
PAL1	YDR348C	RTS1	P38903	757 aa		5.35	□□□□□ -1.55
PAL1	YDR348C	AKR1	P39010	764 aa		5.35	□□□□□ -1.55
PAL1	YDR348C	NUP60	P39705	539 aa		5.35	□□□□□ -1.55
PAL1	YDR348C	TIF4631	P39935	952 aa	Known RBP	5.35	□□□□□ -1.55
PAL1	YDR348C	DLD3	P39976	496 aa	Known RBP	5.35	□□□□□ -1.55
PAL1	YDR348C	SCS2	P40075	244 aa	Known RBP	5.35	□□□□□ -1.55
PAL1	YDR348C	YMR147W	P40218	223 aa	Known RBP	5.35	□□□□□ -1.55
PAL1	YDR348C	YNL320W	P42840	284 aa		5.35	□□□□□ -1.55
PAL1	YDR348C	YJR039W	P47107	1121 aa		5.35	□□□□□ -1.55
PAL1	YDR348C	YNL165W	P53891	406 aa		5.35	□□□□□ -1.55
PAL1	YDR348C	ATP25	Q03153	612 aa		5.35	□□□□□ -1.55
PAL1	YDR348C	YML119W	Q03208	357 aa		5.35	□□□□□ -1.55
PAL1	YDR348C	KAR5	Q04746	504 aa		5.35	□□□□□ -1.55
PAL1	YDR348C	PSR2	Q07949	397 aa		5.35	□□□□□ -1.55
PAL1	YDR348C	YOR389W	Q08912	624 aa		5.35	□□□□□ -1.55
PAL1	YDR348C	CWC2	Q12046	339 aa	Predicted RBP	5.35	□□□□□ -1.55
PAL1	YDR348C	RPP2B	P02400	110 aa	Known RBP	5.34	□□□□□ -1.55
PAL1	YDR348C	NAT1	P12945	854 aa	Known RBP	5.34	□□□□□ -1.55
PAL1	YDR348C	REC107	P21651	314 aa		5.34	□□□□□ -1.55
PAL1	YDR348C	SWI4	P25302	1093 aa	Known RBP	5.34	□□□□□ -1.55
PAL1	YDR348C	NIP1	P32497	812 aa	Known RBP	5.34	□□□□□ -1.55
PAL1	YDR348C	NPL6	P32832	435 aa		5.34	□□□□□ -1.55
PAL1	YDR348C	BUD2	P33314	1104 aa		5.34	□□□□□ -1.55
PAL1	YDR348C	HXT5	P38695	592 aa		5.34	□□□□□ -1.55
PAL1	YDR348C	ERP5	P38819	212 aa		5.34	□□□□□ -1.55
PAL1	YDR348C	SSN3	P39073	555 aa		5.34	□□□□□ -1.55
PAL1	YDR348C	SEC27	P41811	889 aa	Known RBP	5.34	□□□□□ -1.55
PAL1	YDR348C	VID30	P53076	958 aa		5.34	□□□□□ -1.55
PAL1	YDR348C	FAR11	P53917	953 aa		5.34	□□□□□ -1.55
PAL1	YDR348C	ASI1	P54074	624 aa		5.34	□□□□□ -1.55
PAL1	YDR348C	TSR1	Q07381	788 aa	Known RBP	5.34	□□□□□ -1.55
PAL1	YDR348C	PTC5	Q12511	572 aa		5.34	□□□□□ -1.55
PAL1	YDR348C	YBL113C	Q7M4S9	792 aa		5.34	□□□□□ -1.55
PAL1	YDR348C	TY1B-A	O13527	1196 aa	Known RBP	5.33	□□□□□ -1.56
PAL1	YDR348C	APL1	P27351	700 aa		5.33	□□□□□ -1.56
PAL1	YDR348C	RPC19	P28000	142 aa	Known RBP	5.33	□□□□□ -1.56
PAL1	YDR348C	YBR197C	P38306	217 aa		5.33	□□□□□ -1.56
PAL1	YDR348C	PPX1	P38698	397 aa		5.33	□□□□□ -1.56
PAL1	YDR348C	SHE10	P53075	577 aa		5.33	□□□□□ -1.56
PAL1	YDR348C	SFB2	P53953	876 aa		5.33	□□□□□ -1.56
PAL1	YDR348C	UFD2	P54860	961 aa		5.33	□□□□□ -1.56
PAL1	YDR348C	EST2	Q06163	884 aa		5.33	□□□□□ -1.56
PAL1	YDR348C	SPP382	Q06411	708 aa	Predicted RBP	5.33	□□□□□ -1.56
PAL1	YDR348C	YOL075C	Q08234	1294 aa		5.33	□□□□□ -1.56

Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms