RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W SMY1P32364 656 aaKnown RBP3.39□□□□□ -1.87
VPS41YDR080W SLA2P33338 968 aa3.39□□□□□ -1.87
VPS41YDR080W PNT1P38969 423 aa3.39□□□□□ -1.87
VPS41YDR080W YDR132CQ03900 495 aa3.39□□□□□ -1.87
VPS41YDR080W CDC6P09119 513 aa3.38□□□□□ -1.87
VPS41YDR080W AIM3P38266 947 aaKnown RBP3.38□□□□□ -1.87
VPS41YDR080W ATG14P38270 344 aa3.38□□□□□ -1.87
VPS41YDR080W UBP5P39944 805 aa3.38□□□□□ -1.87
VPS41YDR080W TNA1P53322 534 aa3.38□□□□□ -1.87
VPS41YDR080W YLR225CQ05948 407 aaKnown RBP3.38□□□□□ -1.87
VPS41YDR080W PIN2Q12057 282 aa3.38□□□□□ -1.87
VPS41YDR080W GSC2P40989 1895 aa3.38□□□□□ -1.87
VPS41YDR080W LPD1P09624 499 aaKnown RBP3.38□□□□□ -1.87
VPS41YDR080W LYP1P32487 611 aa3.38□□□□□ -1.87
VPS41YDR080W MNR2P35724 969 aa3.38□□□□□ -1.87
VPS41YDR080W SPS1P08458 490 aa3.37□□□□□ -1.87
VPS41YDR080W YKU70P32807 602 aa3.37□□□□□ -1.87
VPS41YDR080W PAM1P37304 830 aaKnown RBP3.37□□□□□ -1.87
VPS41YDR080W PEA2P40091 420 aa3.37□□□□□ -1.87
VPS41YDR080W RMT2Q03305 412 aa3.37□□□□□ -1.87
VPS41YDR080W GNT1Q12096 491 aa3.37□□□□□ -1.87
VPS41YDR080W LYS2P07702 1392 aa3.37□□□□□ -1.87
VPS41YDR080W MSM1P22438 575 aa3.37□□□□□ -1.87
VPS41YDR080W DUS4Q06063 367 aa3.37□□□□□ -1.87
VPS41YDR080W YPL277CQ08989 487 aa3.37□□□□□ -1.87
VPS41YDR080W BI4P03879 638 aa3.36□□□□□ -1.87
VPS41YDR080W ACE2P21192 770 aa3.36□□□□□ -1.87
VPS41YDR080W BAS1P22035 811 aa3.36□□□□□ -1.87
VPS41YDR080W SEC26P41810 973 aaKnown RBP3.36□□□□□ -1.87
VPS41YDR080W IRC3Q06683 689 aa3.36□□□□□ -1.87
VPS41YDR080W XYL2Q07993 356 aa3.36□□□□□ -1.87
VPS41YDR080W TMA46Q12000 345 aaKnown RBP3.36□□□□□ -1.87
VPS41YDR080W CYC1P00044 109 aaPredicted RBP3.36□□□□□ -1.87
VPS41YDR080W INO1P11986 533 aa3.36□□□□□ -1.87
VPS41YDR080W MCM7P38132 845 aa3.36□□□□□ -1.87
VPS41YDR080W BDF2Q07442 638 aa3.36□□□□□ -1.87
VPS41YDR080W COQ4O13525 335 aa3.36□□□□□ -1.87
VPS41YDR080W ABD1P32783 436 aaPredicted RBP3.36□□□□□ -1.87
VPS41YDR080W NPP2P39997 493 aa3.36□□□□□ -1.87
VPS41YDR080W TOP1P04786 769 aa3.35□□□□□ -1.87
VPS41YDR080W ICL1P28240 557 aaPredicted RBP3.35□□□□□ -1.87
VPS41YDR080W CCZ1P38273 704 aa3.35□□□□□ -1.87
VPS41YDR080W TAT2P38967 592 aa3.35□□□□□ -1.87
VPS41YDR080W YFR016CP43597 1233 aaKnown RBP3.35□□□□□ -1.87
VPS41YDR080W YGL176CP46945 554 aa3.35□□□□□ -1.87
VPS41YDR080W HNT2P49775 206 aa3.35□□□□□ -1.87
VPS41YDR080W RRT6P53117 311 aaPredicted RBP3.35□□□□□ -1.87
VPS41YDR080W MAP1Q01662 387 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
VPS41YDR080W RPS13P05756 151 aaKnown RBP3.35□□□□□ -1.87
VPS41YDR080W FLR1P38124 548 aa3.35□□□□□ -1.87
VPS41YDR080W UBP3Q01477 912 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
VPS41YDR080W GDE1Q02979 1223 aa3.35□□□□□ -1.87
VPS41YDR080W SOD2P00447 233 aa3.34□□□□□ -1.87
VPS41YDR080W UBP16Q02863 499 aa3.34□□□□□ -1.87
VPS41YDR080W UBX2Q04228 584 aa3.34□□□□□ -1.87
VPS41YDR080W SSP2Q08646 371 aa3.34□□□□□ -1.87
VPS41YDR080W MEF2P39677 819 aa3.34□□□□□ -1.87
VPS41YDR080W HRQ1Q05549 1077 aa3.34□□□□□ -1.87
VPS41YDR080W NBA1Q08229 501 aaKnown RBP3.34□□□□□ -1.87
VPS41YDR080W STE5P32917 917 aa3.33□□□□□ -1.88
VPS41YDR080W HFM1P51979 1187 aa3.33□□□□□ -1.88
VPS41YDR080W DSD1P53095 428 aa3.33□□□□□ -1.88
VPS41YDR080W MSC2Q03455 724 aa3.33□□□□□ -1.88
VPS41YDR080W SIZ1Q04195 904 aa3.33□□□□□ -1.88
VPS41YDR080W ACM1Q08981 209 aa3.33□□□□□ -1.88
VPS41YDR080W SVS1Q12254 260 aa3.33□□□□□ -1.88
VPS41YDR080W GAL10P04397 699 aa3.33□□□□□ -1.88
VPS41YDR080W YCR015CP25616 317 aa3.33□□□□□ -1.88
VPS41YDR080W LAM1P38851 1228 aa3.33□□□□□ -1.88
VPS41YDR080W YGR117CP53270 476 aa3.33□□□□□ -1.88
VPS41YDR080W SNO2P53823 222 aa3.33□□□□□ -1.88
VPS41YDR080W ROT1Q03691 256 aa3.33□□□□□ -1.88
VPS41YDR080W SYF1Q04048 859 aaPredicted RBP3.33□□□□□ -1.88
VPS41YDR080W CRF1Q04930 467 aa3.33□□□□□ -1.88
VPS41YDR080W ESC8Q08119 714 aa3.33□□□□□ -1.88
VPS41YDR080W CTI6Q08923 506 aa3.33□□□□□ -1.88
VPS41YDR080W RKM4Q12504 494 aa3.33□□□□□ -1.88
VPS41YDR080W KCC4P25389 1037 aa3.33□□□□□ -1.88
VPS41YDR080W AFR1P33304 620 aa3.33□□□□□ -1.88
VPS41YDR080W MAL31P38156 614 aa3.33□□□□□ -1.88
VPS41YDR080W MBP1P39678 833 aa3.33□□□□□ -1.88
VPS41YDR080W CSR2Q12734 1121 aa3.33□□□□□ -1.88
VPS41YDR080W RAD27P26793 382 aa3.32□□□□□ -1.88
VPS41YDR080W TOD6P34219 525 aa3.32□□□□□ -1.88
VPS41YDR080W RFC5P38251 354 aa3.32□□□□□ -1.88
VPS41YDR080W SGD1Q06132 899 aa3.32□□□□□ -1.88
VPS41YDR080W JIP5Q06214 492 aaPredicted RBP3.32□□□□□ -1.88
VPS41YDR080W APE3P37302 537 aaKnown RBP3.32□□□□□ -1.88
VPS41YDR080W RIM8P53179 542 aa3.32□□□□□ -1.88
VPS41YDR080W GCN5Q03330 439 aa3.32□□□□□ -1.88
VPS41YDR080W OPI10Q08202 246 aa3.32□□□□□ -1.88
VPS41YDR080W PRE10P21242 288 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88not detected
VPS41YDR080W YKL107WP34251 309 aa3.31□□□□□ -1.88
VPS41YDR080W GEM1P39722 662 aa3.31□□□□□ -1.88
VPS41YDR080W CMP2P14747 604 aa3.31□□□□□ -1.88
VPS41YDR080W PRI2P20457 528 aa3.31□□□□□ -1.88
VPS41YDR080W VBA5P36172 582 aa3.31□□□□□ -1.88
VPS41YDR080W BUD27P43573 796 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88not detected
VPS41YDR080W GCV2P49095 1034 aa3.31□□□□□ -1.88
VPS41YDR080W ALD6P54115 500 aaKnown RBP3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms