RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C TPS3P38426 1054 aaKnown RBP1.17□□□□□ -2.22
VAM6YDL077C ETP1P38748 585 aaKnown RBP1.17□□□□□ -2.22
VAM6YDL077C ERC1P38767 581 aa1.17□□□□□ -2.22
VAM6YDL077C VMA22P38784 181 aa1.17□□□□□ -2.22
VAM6YDL077C SPT8P38915 602 aa1.17□□□□□ -2.22
VAM6YDL077C NOC2P39744 710 aaKnown RBP1.17□□□□□ -2.22
VAM6YDL077C FCY21P40039 528 aa1.17□□□□□ -2.22
VAM6YDL077C SPO22P40511 975 aa1.17□□□□□ -2.22
VAM6YDL077C YIR042CP40586 236 aa1.17□□□□□ -2.22
VAM6YDL077C EPL1P43572 832 aa1.17□□□□□ -2.22
VAM6YDL077C OSW7P43611 510 aa1.17□□□□□ -2.22
VAM6YDL077C JSN1P47135 1091 aaKnown RBP RIP-Chip data1.17□□□□□ -2.22not detected
VAM6YDL077C INP52P50942 1183 aa1.17□□□□□ -2.22
VAM6YDL077C VPS16Q03308 798 aa1.17□□□□□ -2.22
VAM6YDL077C RSM28Q03430 361 aa1.17□□□□□ -2.22
VAM6YDL077C YML020WQ03722 664 aa1.17□□□□□ -2.22
VAM6YDL077C HMO1Q03973 246 aaKnown RBP1.17□□□□□ -2.22
VAM6YDL077C ARO80Q04052 950 aa1.17□□□□□ -2.22
VAM6YDL077C HEL2Q05580 639 aaKnown RBP1.17□□□□□ -2.22
VAM6YDL077C VAM6Q07468 1049 aa1.17□□□□□ -2.22
VAM6YDL077C APC5Q08683 685 aa1.17□□□□□ -2.22
VAM6YDL077C BUD7Q08754 746 aa1.17□□□□□ -2.22
VAM6YDL077C TRM8Q12009 286 aa1.17□□□□□ -2.22
VAM6YDL077C YKL068W-AQ3E826 78 aa1.17□□□□□ -2.22
VAM6YDL077C YLR278CQ05854 1341 aa1.17□□□□□ -2.22
VAM6YDL077C PGK1P00560 416 aaKnown RBP1.16□□□□□ -2.22
VAM6YDL077C ATP6P00854 259 aa1.16□□□□□ -2.22
VAM6YDL077C SSC1P0CS90 654 aaKnown RBP1.16□□□□□ -2.22
VAM6YDL077C DAL5P15365 543 aa1.16□□□□□ -2.22
VAM6YDL077C STI1P15705 589 aaKnown RBP RIP-Chip data1.16□□□□□ -2.22not detected
VAM6YDL077C PRP16P15938 1071 aaPredicted RBP1.16□□□□□ -2.22
VAM6YDL077C MSB1P21339 1137 aaKnown RBP1.16□□□□□ -2.22
VAM6YDL077C ATP12P22135 325 aa1.16□□□□□ -2.22
VAM6YDL077C PDC6P26263 563 aaKnown RBP1.16□□□□□ -2.22
VAM6YDL077C CDC60P26637 1090 aaKnown RBP1.16□□□□□ -2.22
VAM6YDL077C SMY1P32364 656 aaKnown RBP1.16□□□□□ -2.22
VAM6YDL077C LOS1P33418 1100 aaPredicted RBP1.16□□□□□ -2.22
VAM6YDL077C ALG14P38242 237 aa1.16□□□□□ -2.22
VAM6YDL077C YBR225WP38321 900 aa1.16□□□□□ -2.22
VAM6YDL077C CCC2P38995 1004 aa1.16□□□□□ -2.22
VAM6YDL077C PDS1P40316 373 aaPredicted RBP1.16□□□□□ -2.22
VAM6YDL077C UTP18P40362 594 aaPredicted RBP1.16□□□□□ -2.22
VAM6YDL077C SER33P40510 469 aa1.16□□□□□ -2.22
VAM6YDL077C AIM21P40563 679 aa1.16□□□□□ -2.22
VAM6YDL077C LEM3P42838 414 aa1.16□□□□□ -2.22
VAM6YDL077C YFH7P43591 353 aa1.16□□□□□ -2.22
VAM6YDL077C SAP155P43612 1002 aa1.16□□□□□ -2.22
VAM6YDL077C GCD14P46959 383 aaPredicted RBP1.16□□□□□ -2.22
VAM6YDL077C VPS53P47061 822 aa1.16□□□□□ -2.22
VAM6YDL077C LIF1P53150 421 aa1.16□□□□□ -2.22
VAM6YDL077C YGR054WP53235 642 aaKnown RBP1.16□□□□□ -2.22
VAM6YDL077C ARC35P53731 342 aaKnown RBP1.16□□□□□ -2.22
VAM6YDL077C CNM67P53865 581 aaKnown RBP1.16□□□□□ -2.22
VAM6YDL077C IMP4P53941 290 aaKnown RBP1.16□□□□□ -2.22
VAM6YDL077C HEF3P53978 1044 aaKnown RBP1.16□□□□□ -2.22
VAM6YDL077C GTR1Q00582 310 aa1.16□□□□□ -2.22
VAM6YDL077C CIK1Q01649 594 aa1.16□□□□□ -2.22
VAM6YDL077C TY1A-DR2Q03964 440 aaKnown RBP1.16□□□□□ -2.22
VAM6YDL077C MMR1Q06324 491 aa1.16□□□□□ -2.22
VAM6YDL077C MAG2Q06436 670 aaKnown RBP1.16□□□□□ -2.22
VAM6YDL077C RSC3Q06639 885 aa1.16□□□□□ -2.22
VAM6YDL077C RIX7Q07844 837 aaKnown RBP1.16□□□□□ -2.22
VAM6YDL077C CLP1Q08685 445 aaPredicted RBP1.16□□□□□ -2.22
VAM6YDL077C YPL150WQ12152 901 aa1.16□□□□□ -2.22
VAM6YDL077C MCM16Q12262 181 aa1.16□□□□□ -2.22
VAM6YDL077C YOR131CQ12486 218 aa1.16□□□□□ -2.22
VAM6YDL077C SEC7P11075 2009 aaKnown RBP1.16□□□□□ -2.22
VAM6YDL077C YML002WP0CF17 737 aa1.16□□□□□ -2.22
VAM6YDL077C SNA3P14359 133 aa1.16□□□□□ -2.22
VAM6YDL077C FAR1P21268 830 aa1.16□□□□□ -2.22
VAM6YDL077C OSM1P21375 501 aaKnown RBP1.16□□□□□ -2.22
VAM6YDL077C RAD53P22216 821 aa1.16□□□□□ -2.22
VAM6YDL077C SEC15P22224 910 aa1.16□□□□□ -2.22
VAM6YDL077C ISF1P32488 338 aa1.16□□□□□ -2.22
VAM6YDL077C GCD6P32501 712 aaKnown RBP1.16□□□□□ -2.22
VAM6YDL077C SMC1P32908 1225 aa1.16□□□□□ -2.22
VAM6YDL077C PMT1P33775 817 aa1.16□□□□□ -2.22
VAM6YDL077C PTH2P34222 208 aa1.16□□□□□ -2.22
VAM6YDL077C SET3P36124 751 aa1.16□□□□□ -2.22
VAM6YDL077C PIM1P36775 1133 aa1.16□□□□□ -2.22
VAM6YDL077C EFM2P38347 419 aa1.16□□□□□ -2.22
VAM6YDL077C SAK1P38990 1142 aa1.16□□□□□ -2.22
VAM6YDL077C GVP36P40531 326 aaKnown RBP1.16□□□□□ -2.22
VAM6YDL077C GUS1P46655 708 aaKnown RBP RIP-Chip data1.16□□□□□ -2.22not detected
VAM6YDL077C YJR039WP47107 1121 aa1.16□□□□□ -2.22
VAM6YDL077C SGM1P47166 707 aa1.16□□□□□ -2.22
VAM6YDL077C CWH41P53008 833 aa1.16□□□□□ -2.22
VAM6YDL077C PEX14P53112 341 aa1.16□□□□□ -2.22
VAM6YDL077C MDR1P53258 950 aa1.16□□□□□ -2.22
VAM6YDL077C RBG2P53295 368 aaKnown RBP1.16□□□□□ -2.22
VAM6YDL077C RTC4P53850 401 aa1.16□□□□□ -2.22
VAM6YDL077C YNL193WP53870 558 aa1.16□□□□□ -2.22
VAM6YDL077C YNL040WP53960 456 aaPredicted RBP1.16□□□□□ -2.22
VAM6YDL077C PTA1Q01329 785 aaPredicted RBP1.16□□□□□ -2.22
VAM6YDL077C YKR005CQ02203 525 aa1.16□□□□□ -2.22
VAM6YDL077C MFM1Q02783 413 aa1.16□□□□□ -2.22
VAM6YDL077C LGE1Q02796 332 aaKnown RBP1.16□□□□□ -2.22
VAM6YDL077C DML1Q03652 475 aa1.16□□□□□ -2.22
VAM6YDL077C CWC15Q03772 175 aaKnown RBP1.16□□□□□ -2.22
VAM6YDL077C DYN3Q04949 312 aa1.16□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 183.3 ms