RNA–Protein interactions for RNA: YCL050C

APA1, Transcript of AP4A phosphorylase, yeast

Gene APA1, Length 966 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APA1	YCL050C	CHZ1	P40019	153 aa	Predicted RBP	5.68	□□□□□ -1.5
APA1	YCL050C	SED4	P25365	1065 aa		5.67	□□□□□ -1.5
APA1	YCL050C	TYE7	P33122	291 aa	Predicted RBP	5.67	□□□□□ -1.5
APA1	YCL050C	BET3	P36149	193 aa		5.67	□□□□□ -1.5
APA1	YCL050C	YIL108W	P40483	696 aa	Known RBP	5.67	□□□□□ -1.5
APA1	YCL050C	URM1	P40554	99 aa	Predicted RBP	5.67	□□□□□ -1.5
APA1	YCL050C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	5.67	□□□□□ -1.5	not detected
APA1	YCL050C	NPC2	Q12408	173 aa		5.67	□□□□□ -1.5
APA1	YCL050C	URA1	P28272	314 aa	Predicted RBP	5.66	□□□□□ -1.5
APA1	YCL050C	RPD3	P32561	433 aa		5.66	□□□□□ -1.5
APA1	YCL050C	RTA1	P53047	317 aa		5.66	□□□□□ -1.5
APA1	YCL050C	PUS2	P53167	370 aa		5.66	□□□□□ -1.5
APA1	YCL050C	SSL1	Q04673	461 aa	Predicted RBP	5.66	□□□□□ -1.5
APA1	YCL050C	ENV7	Q12003	364 aa		5.66	□□□□□ -1.5
APA1	YCL050C	ALG2	P43636	503 aa		5.65	□□□□□ -1.5
APA1	YCL050C	YKR011C	Q02209	353 aa		5.65	□□□□□ -1.5
APA1	YCL050C	RPN4	Q03465	531 aa		5.65	□□□□□ -1.5
APA1	YCL050C	KCS1	Q12494	1050 aa		5.65	□□□□□ -1.5
APA1	YCL050C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	5.64	□□□□□ -1.51	not detected
APA1	YCL050C	HCM1	P25364	564 aa		5.64	□□□□□ -1.51
APA1	YCL050C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	5.64	□□□□□ -1.51	not detected
APA1	YCL050C	NCS6	P53088	359 aa		5.64	□□□□□ -1.51
APA1	YCL050C	DAM1	P53267	343 aa		5.64	□□□□□ -1.51
APA1	YCL050C	UPC2	Q12151	913 aa		5.64	□□□□□ -1.51
APA1	YCL050C	CAD1	P24813	409 aa	Known RBP	5.63	□□□□□ -1.51
APA1	YCL050C	EMC3	P36039	253 aa		5.63	□□□□□ -1.51
APA1	YCL050C	NOG2	P53742	486 aa	Known RBP	5.63	□□□□□ -1.51
APA1	YCL050C	HDA1	P53973	706 aa		5.63	□□□□□ -1.51
APA1	YCL050C	DAL7	P21826	554 aa		5.62	□□□□□ -1.51
APA1	YCL050C	CYS3	P31373	394 aa	Known RBP	5.62	□□□□□ -1.51
APA1	YCL050C	TIM23	P32897	222 aa		5.62	□□□□□ -1.51
APA1	YCL050C	OSW7	P43611	510 aa		5.62	□□□□□ -1.51
APA1	YCL050C	YDR514C	Q04408	483 aa		5.62	□□□□□ -1.51
APA1	YCL050C	ERR1	P0CX10	437 aa		5.61	□□□□□ -1.51
APA1	YCL050C	ERR2	P0CX11	437 aa		5.61	□□□□□ -1.51
APA1	YCL050C	PFK1	P16861	987 aa	Known RBP	5.61	□□□□□ -1.51
APA1	YCL050C	SAP190	P36123	1033 aa		5.61	□□□□□ -1.51
APA1	YCL050C	YTA7	P40340	1379 aa		5.61	□□□□□ -1.51
APA1	YCL050C	GYP8	P43570	497 aa		5.61	□□□□□ -1.51
APA1	YCL050C	YGR283C	P53336	341 aa	Predicted RBP	5.61	□□□□□ -1.51
APA1	YCL050C	PPM2	Q08282	695 aa		5.61	□□□□□ -1.51
APA1	YCL050C	TUB2	P02557	457 aa	Known RBP	5.6	□□□□□ -1.51
APA1	YCL050C	DCG1	P32460	244 aa		5.6	□□□□□ -1.51
APA1	YCL050C	NUP82	P40368	713 aa		5.6	□□□□□ -1.51
APA1	YCL050C	SDP1	P40479	209 aa		5.6	□□□□□ -1.51
APA1	YCL050C	HSV2	P50079	448 aa	Predicted RBP	5.6	□□□□□ -1.51
APA1	YCL050C	PHO23	P50947	330 aa		5.6	□□□□□ -1.51
APA1	YCL050C	EXG2	P52911	562 aa		5.6	□□□□□ -1.51
APA1	YCL050C	TAD1	P53065	400 aa		5.6	□□□□□ -1.51
APA1	YCL050C	URN1	Q06525	465 aa	Known RBP	5.6	□□□□□ -1.51
APA1	YCL050C	REH1	Q06709	432 aa		5.6	□□□□□ -1.51
APA1	YCL050C	PRC1	P00729	532 aa		5.59	□□□□□ -1.51
APA1	YCL050C	TRM2	P33753	639 aa		5.59	□□□□□ -1.51
APA1	YCL050C	BUD6	P41697	788 aa		5.59	□□□□□ -1.51
APA1	YCL050C	MET7	Q08645	548 aa		5.59	□□□□□ -1.51
APA1	YCL050C	GUP2	Q08929	609 aa		5.59	□□□□□ -1.51
APA1	YCL050C	YLR125W	Q12138	136 aa		5.59	□□□□□ -1.51
APA1	YCL050C	NTO1	Q12311	748 aa		5.59	□□□□□ -1.51
APA1	YCL050C	PMA1	P05030	918 aa	Known RBP	5.58	□□□□□ -1.52
APA1	YCL050C	FBP1	P09201	348 aa		5.58	□□□□□ -1.52
APA1	YCL050C	RAD53	P22216	821 aa		5.58	□□□□□ -1.52
APA1	YCL050C	KAR4	P25583	335 aa		5.58	□□□□□ -1.52
APA1	YCL050C	STE14	P32584	239 aa		5.58	□□□□□ -1.52
APA1	YCL050C	GDH3	P39708	457 aa		5.58	□□□□□ -1.52
APA1	YCL050C	FPR4	Q06205	392 aa	Predicted RBP	5.58	□□□□□ -1.52
APA1	YCL050C	ENB1	Q08299	606 aa		5.58	□□□□□ -1.52
APA1	YCL050C	YOR022C	Q12204	715 aa		5.58	□□□□□ -1.52
APA1	YCL050C	SWM1	Q12379	170 aa		5.58	□□□□□ -1.52
APA1	YCL050C	PHO8	P11491	566 aa		5.57	□□□□□ -1.52
APA1	YCL050C	SPC29	P33419	253 aa		5.57	□□□□□ -1.52
APA1	YCL050C	YHR078W	P38799	552 aa		5.57	□□□□□ -1.52
APA1	YCL050C	CTF8	P38877	133 aa		5.57	□□□□□ -1.52
APA1	YCL050C	SHR5	P41912	237 aa		5.57	□□□□□ -1.52
APA1	YCL050C	LRS4	Q04087	347 aa	Known RBP	5.57	□□□□□ -1.52
APA1	YCL050C	PEX19	Q07418	342 aa		5.57	□□□□□ -1.52
APA1	YCL050C	AIM39	Q08223	395 aa		5.57	□□□□□ -1.52
APA1	YCL050C	HAL9	Q12180	1030 aa		5.57	□□□□□ -1.52
APA1	YCL050C	YCL002C	P25565	263 aa		5.56	□□□□□ -1.52
APA1	YCL050C	DUS1	P53759	423 aa	Known RBP	5.56	□□□□□ -1.52
APA1	YCL050C	ATP25	Q03153	612 aa		5.56	□□□□□ -1.52
APA1	YCL050C	GSF2	Q04697	403 aa	Known RBP	5.56	□□□□□ -1.52
APA1	YCL050C	CIT2	P08679	460 aa		5.55	□□□□□ -1.52
APA1	YCL050C	PMI40	P29952	429 aa	Known RBP	5.55	□□□□□ -1.52
APA1	YCL050C	SEC21	P32074	935 aa	Known RBP	5.55	□□□□□ -1.52
APA1	YCL050C	THI4	P32318	326 aa		5.55	□□□□□ -1.52
APA1	YCL050C	SET5	P38890	526 aa	Known RBP	5.55	□□□□□ -1.52
APA1	YCL050C	ZDS1	P50111	915 aa	Known RBP	5.55	□□□□□ -1.52
APA1	YCL050C	PER1	P25625	357 aa		5.54	□□□□□ -1.52
APA1	YCL050C	RSC3	Q06639	885 aa		5.54	□□□□□ -1.52
APA1	YCL050C	DIF1	O13577	133 aa		5.53	□□□□□ -1.52
APA1	YCL050C	GSY1	P23337	708 aa		5.53	□□□□□ -1.52
APA1	YCL050C	HRR25	P29295	494 aa	Known RBP	5.53	□□□□□ -1.52
APA1	YCL050C	PZF1	P39933	429 aa		5.53	□□□□□ -1.52
APA1	YCL050C	RLP7	P40693	322 aa	Known RBP	5.53	□□□□□ -1.52
APA1	YCL050C	SSY5	P47002	699 aa		5.53	□□□□□ -1.52
APA1	YCL050C	MSE1	P48525	536 aa		5.53	□□□□□ -1.52
APA1	YCL050C	NGG1	P32494	702 aa		5.52	□□□□□ -1.53
APA1	YCL050C	DEF1	P35732	738 aa	Known RBP	5.52	□□□□□ -1.53
APA1	YCL050C	MSS4	P38994	779 aa		5.52	□□□□□ -1.53
APA1	YCL050C	DSS1	P39112	969 aa		5.52	□□□□□ -1.53

Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms