RNA–Protein interactions for RNA: YAL021C

CCR4, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CCR4, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCR4YAL021C LIN1P38852 340 aaPredicted RBP7.75□□□□□ -1.17
CCR4YAL021C FCY21P40039 528 aa7.75□□□□□ -1.17
CCR4YAL021C QDR2P40474 542 aa7.75□□□□□ -1.17
CCR4YAL021C SAP155P43612 1002 aa7.75□□□□□ -1.17
CCR4YAL021C GNP1P48813 663 aa7.75□□□□□ -1.17
CCR4YAL021C STB4P50104 949 aa7.75□□□□□ -1.17
CCR4YAL021C SPO1P53541 631 aa7.75□□□□□ -1.17
CCR4YAL021C FYV6P53913 173 aa7.75□□□□□ -1.17
CCR4YAL021C RCM1P53972 490 aa7.75□□□□□ -1.17
CCR4YAL021C OYE2Q03558 400 aaKnown RBP7.75□□□□□ -1.17
CCR4YAL021C SVF1Q05515 481 aa7.75□□□□□ -1.17
CCR4YAL021C ARG1P22768 420 aa7.74□□□□□ -1.17
CCR4YAL021C TRX2P22803 104 aaKnown RBP7.74□□□□□ -1.17
CCR4YAL021C YKL050CP35736 922 aa7.74□□□□□ -1.17
CCR4YAL021C RRF1P38771 230 aa7.74□□□□□ -1.17
CCR4YAL021C YIL001WP40560 513 aa7.74□□□□□ -1.17
CCR4YAL021C PPM1Q04081 328 aa7.74□□□□□ -1.17
CCR4YAL021C YCS4Q06156 1176 aa7.74□□□□□ -1.17
CCR4YAL021C FAP7Q12055 197 aaPredicted RBP7.74□□□□□ -1.17
CCR4YAL021C WSC3Q12215 556 aa7.74□□□□□ -1.17
CCR4YAL021C KEX1P09620 729 aa7.74□□□□□ -1.17
CCR4YAL021C VPS1P21576 704 aaKnown RBP7.74□□□□□ -1.17
CCR4YAL021C RIM11P38615 370 aa7.74□□□□□ -1.17
CCR4YAL021C KIC1P38692 1080 aa7.74□□□□□ -1.17
CCR4YAL021C TDA11P38854 504 aa7.74□□□□□ -1.17
CCR4YAL021C DOT6P40059 670 aaKnown RBP7.74□□□□□ -1.17
CCR4YAL021C YER186CP40101 306 aa7.74□□□□□ -1.17
CCR4YAL021C TEL2P53038 688 aa7.74□□□□□ -1.17
CCR4YAL021C LAP3Q01532 483 aaKnown RBP RIP-Chip data7.74□□□□□ -1.17not detected
CCR4YAL021C EIS1Q05050 843 aaKnown RBP7.74□□□□□ -1.17
CCR4YAL021C YOR223WQ12015 292 aa7.74□□□□□ -1.17
CCR4YAL021C MPH2P0CD99 609 aa7.73□□□□□ -1.17
CCR4YAL021C ASF2P32448 525 aaPredicted RBP7.73□□□□□ -1.17
CCR4YAL021C SMI1P32566 505 aa7.73□□□□□ -1.17
CCR4YAL021C AFR1P33304 620 aa7.73□□□□□ -1.17
CCR4YAL021C UTP11P34247 250 aaPredicted RBP7.73□□□□□ -1.17
CCR4YAL021C ALG3P38179 458 aa7.73□□□□□ -1.17
CCR4YAL021C SWC5P38326 303 aa7.73□□□□□ -1.17
CCR4YAL021C RPN10P38886 268 aaKnown RBP7.73□□□□□ -1.17
CCR4YAL021C CCT3P39077 534 aaKnown RBP7.73□□□□□ -1.17
CCR4YAL021C RNH70P53331 553 aa7.73□□□□□ -1.17
CCR4YAL021C ATP16Q12165 160 aa7.73□□□□□ -1.17
CCR4YAL021C TRP2P00899 507 aaKnown RBP7.73□□□□□ -1.17
CCR4YAL021C GAL1P04385 528 aa7.73□□□□□ -1.17
CCR4YAL021C GLK1P17709 500 aaKnown RBP7.73□□□□□ -1.17
CCR4YAL021C YJU2P28320 278 aaPredicted RBP7.73□□□□□ -1.17
CCR4YAL021C TRF5P48561 642 aaKnown RBP7.73□□□□□ -1.17
CCR4YAL021C NUP84P52891 726 aa7.73□□□□□ -1.17
CCR4YAL021C ARI1P53111 347 aaKnown RBP7.73□□□□□ -1.17
CCR4YAL021C NIS1P53939 407 aa7.73□□□□□ -1.17
CCR4YAL021C YPL109CQ02981 657 aa7.73□□□□□ -1.17
CCR4YAL021C CTI6Q08923 506 aa7.73□□□□□ -1.17
CCR4YAL021C TRM8Q12009 286 aa7.73□□□□□ -1.17
CCR4YAL021C TOM70P07213 617 aaKnown RBP7.72□□□□□ -1.17
CCR4YAL021C ACE2P21192 770 aa7.72□□□□□ -1.17
CCR4YAL021C DBP1P24784 617 aaKnown RBP7.72□□□□□ -1.17
CCR4YAL021C MIF2P35201 549 aa7.72□□□□□ -1.17
CCR4YAL021C TEF4P36008 412 aaKnown RBP7.72□□□□□ -1.17
CCR4YAL021C CCL1P37366 393 aa7.72□□□□□ -1.17
CCR4YAL021C SDH8P38345 138 aa7.72□□□□□ -1.17
CCR4YAL021C MTW1P39731 289 aa7.72□□□□□ -1.17
CCR4YAL021C INA22P40576 216 aa7.72□□□□□ -1.17
CCR4YAL021C STB2P46679 850 aa7.72□□□□□ -1.17
CCR4YAL021C COG6P53959 839 aa7.72□□□□□ -1.17
CCR4YAL021C CIK1Q01649 594 aa7.72□□□□□ -1.17
CCR4YAL021C THS1P04801 734 aaKnown RBP7.72□□□□□ -1.17
CCR4YAL021C KIN2P13186 1147 aaKnown RBP7.72□□□□□ -1.17
CCR4YAL021C NCP1P16603 691 aaKnown RBP7.72□□□□□ -1.17
CCR4YAL021C DAP2P18962 818 aa7.72□□□□□ -1.17
CCR4YAL021C HSP60P19882 572 aaKnown RBP7.72□□□□□ -1.17
CCR4YAL021C YME1P32795 747 aa7.72□□□□□ -1.17
CCR4YAL021C MRPL17P36528 281 aa7.72□□□□□ -1.17
CCR4YAL021C SCS2P40075 244 aaKnown RBP7.72□□□□□ -1.17
CCR4YAL021C MNN11P46985 422 aaKnown RBP7.72□□□□□ -1.17
CCR4YAL021C NCS2P53923 493 aaPredicted RBP7.72□□□□□ -1.17
CCR4YAL021C STE23Q06010 1027 aa7.72□□□□□ -1.17
CCR4YAL021C YLR177WQ06251 628 aa7.72□□□□□ -1.17
CCR4YAL021C CRN1Q06440 651 aa7.72□□□□□ -1.17
CCR4YAL021C NMT1P14743 455 aa7.71□□□□□ -1.18
CCR4YAL021C PFK2P16862 959 aaKnown RBP RIP-Chip data7.71□□□□□ -1.18not detected
CCR4YAL021C RPC53P25441 422 aa7.71□□□□□ -1.18
CCR4YAL021C DBP7P36120 742 aaKnown RBP7.71□□□□□ -1.18
CCR4YAL021C MRX3P38172 270 aa7.71□□□□□ -1.18
CCR4YAL021C PCI8P40512 444 aa7.71□□□□□ -1.18
CCR4YAL021C GCV2P49095 1034 aa7.71□□□□□ -1.18
CCR4YAL021C SQS1P53866 767 aaKnown RBP7.71□□□□□ -1.18
CCR4YAL021C SLU7Q02775 382 aaKnown RBP7.71□□□□□ -1.18
CCR4YAL021C TFB2Q02939 513 aa7.71□□□□□ -1.18
CCR4YAL021C ABZ2Q03266 374 aa7.71□□□□□ -1.18
CCR4YAL021C HER2Q03557 464 aa7.71□□□□□ -1.18
CCR4YAL021C RPN9Q04062 393 aaKnown RBP7.71□□□□□ -1.18
CCR4YAL021C TUS1Q06412 1307 aa7.71□□□□□ -1.18
CCR4YAL021C HIR3P47171 1648 aa7.71□□□□□ -1.18
CCR4YAL021C TRL1P09880 827 aaKnown RBP7.71□□□□□ -1.18
CCR4YAL021C PEX1P24004 1043 aa7.71□□□□□ -1.18
CCR4YAL021C HXT3P32466 567 aaKnown RBP7.71□□□□□ -1.18
CCR4YAL021C AGE2P40529 298 aa7.71□□□□□ -1.18
CCR4YAL021C VTC2P43585 828 aa7.71□□□□□ -1.18
CCR4YAL021C MCM21Q06675 368 aa7.71□□□□□ -1.18
CCR4YAL021C SBP1P10080 294 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms