RNA–Protein interactions for RNA: ENST00000618148.1

VPS45-213, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-213ENST00000618148 DDX19BQ9UMR2 479 aa9.48□□□□□ -0.89
VPS45-213ENST00000618148 COL15A1P39059 1388 aa9.47□□□□□ -0.89
VPS45-213ENST00000618148 UBR3Q6ZT12 1888 aa9.47□□□□□ -0.89
VPS45-213ENST00000618148 MAP3K15Q6ZN16 1313 aa9.47□□□□□ -0.89
VPS45-213ENST00000618148 BCORQ6W2J9 1755 aa9.47□□□□□ -0.89
VPS45-213ENST00000618148 ERVV-1B6SEH8 477 aa9.47□□□□□ -0.89
VPS45-213ENST00000618148 RPS6KA4O75676 772 aa9.47□□□□□ -0.89
VPS45-213ENST00000618148 KCNQ4P56696 695 aa9.47□□□□□ -0.89
VPS45-213ENST00000618148 IRX6P78412 446 aaPredicted RBP9.47□□□□□ -0.89
VPS45-213ENST00000618148 CCDC125Q86Z20 511 aa9.47□□□□□ -0.89
VPS45-213ENST00000618148 CAMKK2Q96RR4 588 aa9.47□□□□□ -0.89
VPS45-213ENST00000618148 METTL22Q9BUU2 404 aaPredicted RBP9.47□□□□□ -0.89
VPS45-213ENST00000618148 MAP3K2Q9Y2U5 619 aa9.47□□□□□ -0.89
VPS45-213ENST00000618148 COG6Q9Y2V7 657 aa9.47□□□□□ -0.89
VPS45-213ENST00000618148 SCN7AQ01118 1682 aa9.47□□□□□ -0.89
VPS45-213ENST00000618148 ZBTB7BO15156 539 aaPredicted RBP9.46□□□□□ -0.89
VPS45-213ENST00000618148 ALDH1L1O75891 902 aa9.46□□□□□ -0.89
VPS45-213ENST00000618148 PLCG2P16885 1265 aa9.46□□□□□ -0.89
VPS45-213ENST00000618148 TRIM28Q13263 835 aaKnown RBP9.46□□□□□ -0.89
VPS45-213ENST00000618148 LINS1Q8NG48 757 aa9.46□□□□□ -0.89
VPS45-213ENST00000618148 EXOC6Q8TAG9 804 aa9.46□□□□□ -0.89
VPS45-213ENST00000618148 ZBTB40Q9NUA8 1239 aa9.46□□□□□ -0.89
VPS45-213ENST00000618148 A0A087WZG4 1122 aa9.45□□□□□ -0.9
VPS45-213ENST00000618148 CAMTA2O94983 1202 aa9.45□□□□□ -0.9
VPS45-213ENST00000618148 IGKV5-2P06315 115 aa9.45□□□□□ -0.9
VPS45-213ENST00000618148 AIMP1Q12904 312 aaKnown RBP9.45□□□□□ -0.9
VPS45-213ENST00000618148 ITPRIPQ8IWB1 547 aa9.45□□□□□ -0.9
VPS45-213ENST00000618148 SRCIN1Q9C0H9 1055 aa9.45□□□□□ -0.9
VPS45-213ENST00000618148 CHMP4BQ9H444 224 aaKnown RBP9.45□□□□□ -0.9
VPS45-213ENST00000618148 GTF3C3Q9Y5Q9 886 aa9.45□□□□□ -0.9
VPS45-213ENST00000618148 C4AP0C0L4 1744 aa9.45□□□□□ -0.9
VPS45-213ENST00000618148 UTYO14607 1347 aa9.45□□□□□ -0.9
VPS45-213ENST00000618148 GNPATO15228 680 aa9.45□□□□□ -0.9
VPS45-213ENST00000618148 GIGYF2Q6Y7W6 1299 aaKnown RBP9.45□□□□□ -0.9
VPS45-213ENST00000618148 KIF6Q6ZMV9 814 aa9.45□□□□□ -0.9
VPS45-213ENST00000618148 RIC3Q7Z5B4 369 aa9.45□□□□□ -0.9
VPS45-213ENST00000618148 AMIGO3Q86WK7 504 aa9.45□□□□□ -0.9
VPS45-213ENST00000618148 DZIP3Q86Y13 1208 aaKnown RBP9.45□□□□□ -0.9
VPS45-213ENST00000618148 RTN4Q9NQC3 1192 aaKnown RBP9.45□□□□□ -0.9
VPS45-213ENST00000618148 ANKRD36CQ5JPF3 1778 aa9.44□□□□□ -0.9
VPS45-213ENST00000618148 NEURL1BA8MQ27 555 aa9.44□□□□□ -0.9
VPS45-213ENST00000618148 SNPHO15079 494 aa9.44□□□□□ -0.9
VPS45-213ENST00000618148 SSFA2P28290 1259 aa9.44□□□□□ -0.9
VPS45-213ENST00000618148 SLC4A10Q6U841 1118 aa9.44□□□□□ -0.9
VPS45-213ENST00000618148 CLEC4GQ6UXB4 293 aa9.44□□□□□ -0.9
VPS45-213ENST00000618148 ISCA1Q9BUE6 129 aa9.44□□□□□ -0.9
VPS45-213ENST00000618148 USP44Q9H0E7 712 aa9.44□□□□□ -0.9
VPS45-213ENST00000618148 RTCBQ9Y3I0 505 aaKnown RBP9.44□□□□□ -0.9
VPS45-213ENST00000618148 QSER1Q2KHR3 1735 aa9.44□□□□□ -0.9
VPS45-213ENST00000618148 BAG6P46379 1132 aa9.43□□□□□ -0.9
VPS45-213ENST00000618148 NEXNQ0ZGT2 675 aa9.43□□□□□ -0.9
VPS45-213ENST00000618148 TCIRG1Q13488 830 aa9.43□□□□□ -0.9
VPS45-213ENST00000618148 HSP90AB3PQ58FF7 597 aa9.43□□□□□ -0.9
VPS45-213ENST00000618148 AK7Q96M32 723 aa9.43□□□□□ -0.9
VPS45-213ENST00000618148 ZBTB3Q9H5J0 574 aa9.43□□□□□ -0.9
VPS45-213ENST00000618148 NARFQ9UHQ1 456 aa9.43□□□□□ -0.9
VPS45-213ENST00000618148 NUP98P52948 1817 aa9.43□□□□□ -0.9
VPS45-213ENST00000618148 USP42Q9H9J4 1324 aaKnown RBP9.43□□□□□ -0.9
VPS45-213ENST00000618148 EN1Q05925 392 aaPredicted RBP9.42□□□□□ -0.9
VPS45-213ENST00000618148 GCKRQ14397 625 aa9.42□□□□□ -0.9
VPS45-213ENST00000618148 HLFQ16534 295 aa9.42□□□□□ -0.9
VPS45-213ENST00000618148 ZNF34Q8IZ26 560 aa9.42□□□□□ -0.9
VPS45-213ENST00000618148 CCDC191Q8NCU4 936 aa9.42□□□□□ -0.9
VPS45-213ENST00000618148 MEIS3Q99687 375 aa9.42□□□□□ -0.9
VPS45-213ENST00000618148 PPP4R2Q9NY27 417 aa9.42□□□□□ -0.9
VPS45-213ENST00000618148 TUBGCP6Q96RT7 1819 aa9.42□□□□□ -0.9
VPS45-213ENST00000618148 COL24A1Q17RW2 1714 aa9.42□□□□□ -0.9
VPS45-213ENST00000618148 GNAI3P08754 354 aa9.42□□□□□ -0.9
VPS45-213ENST00000618148 SF3B2Q13435 895 aaKnown RBP9.42□□□□□ -0.9
VPS45-213ENST00000618148 EZH2Q15910 746 aaKnown RBP9.42□□□□□ -0.9
VPS45-213ENST00000618148 ZNF827Q17R98 1081 aa9.42□□□□□ -0.9
VPS45-213ENST00000618148 CWF19L2Q2TBE0 894 aaKnown RBP9.42□□□□□ -0.9
VPS45-213ENST00000618148 NPM2Q86SE8 214 aaKnown RBP9.42□□□□□ -0.9
VPS45-213ENST00000618148 ARHGEF1Q92888 912 aaKnown RBP9.42□□□□□ -0.9
VPS45-213ENST00000618148 MYD88Q99836 296 aa9.42□□□□□ -0.9
VPS45-213ENST00000618148 TMEM106CQ9BVX2 250 aa9.42□□□□□ -0.9
VPS45-213ENST00000618148 BCL2L12Q9HB09 334 aa9.42□□□□□ -0.9
VPS45-213ENST00000618148 TBC1D2BQ9UPU7 963 aa9.42□□□□□ -0.9
VPS45-213ENST00000618148 ZNF330Q9Y3S2 320 aaPredicted RBP9.42□□□□□ -0.9
VPS45-213ENST00000618148 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.41□□□□□ -0.9
VPS45-213ENST00000618148 GRM8O00222 908 aa9.41□□□□□ -0.9
VPS45-213ENST00000618148 CASP7P55210 303 aa9.41□□□□□ -0.9
VPS45-213ENST00000618148 ZNF652Q9Y2D9 606 aa9.41□□□□□ -0.9
VPS45-213ENST00000618148 PCDHB15Q9Y5E8 787 aa9.41□□□□□ -0.9
VPS45-213ENST00000618148 AFDNP55196 1824 aaKnown RBP9.41□□□□□ -0.9
VPS45-213ENST00000618148 UBN2Q6ZU65 1347 aa9.4□□□□□ -0.9
VPS45-213ENST00000618148 H7C1W4 665 aa9.4□□□□□ -0.9
VPS45-213ENST00000618148 TRAPPC3LQ5T215 181 aa9.4□□□□□ -0.9
VPS45-213ENST00000618148 DEFB132Q7Z7B7 95 aa9.4□□□□□ -0.9
VPS45-213ENST00000618148 NLRP10Q86W26 655 aa9.4□□□□□ -0.9
VPS45-213ENST00000618148 IFNL1Q8IU54 200 aa9.4□□□□□ -0.9
VPS45-213ENST00000618148 FLAD1Q8NFF5 587 aa9.4□□□□□ -0.9
VPS45-213ENST00000618148 UPF1Q92900 1129 aaKnown RBP eCLIP9.4□□□□□ -0.9
VPS45-213ENST00000618148 ANO8Q9HCE9 1232 aaPredicted RBP9.4□□□□□ -0.9
VPS45-213ENST00000618148 CWC25Q9NXE8 425 aaPredicted RBP9.4□□□□□ -0.9
VPS45-213ENST00000618148 ATP5J2-PTCD1G3V325 749 aa9.39□□□□□ -0.91
VPS45-213ENST00000618148 NBPF7P0C2Y1 421 aaPredicted RBP9.39□□□□□ -0.91
VPS45-213ENST00000618148 UBTFL1P0CB47 393 aaPredicted RBP9.39□□□□□ -0.91
VPS45-213ENST00000618148 IRX5P78411 483 aaPredicted RBP9.39□□□□□ -0.91
VPS45-213ENST00000618148 MTX1Q13505 466 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms