RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 KIF3AQ9Y496 699 aa7.79□□□□□ -1.16
NEDD9-202ENST00000379446 LPXNO60711 386 aa7.78□□□□□ -1.16
NEDD9-202ENST00000379446 HUNKP57058 714 aa7.78□□□□□ -1.16
NEDD9-202ENST00000379446 SLC27A3Q5K4L6 730 aa7.78□□□□□ -1.16
NEDD9-202ENST00000379446 SPOUT1Q5T280 376 aaKnown RBP7.78□□□□□ -1.16
NEDD9-202ENST00000379446 ARHGEF5Q12774 1597 aa7.78□□□□□ -1.16
NEDD9-202ENST00000379446 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.78□□□□□ -1.16
NEDD9-202ENST00000379446 MATR3P43243 847 aaKnown RBP eCLIP7.78□□□□□ -1.164e-6■□□□□ 8.9
NEDD9-202ENST00000379446 CRKLP46109 303 aaKnown RBP7.78□□□□□ -1.16
NEDD9-202ENST00000379446 CEP89Q96ST8 783 aa7.78□□□□□ -1.16
NEDD9-202ENST00000379446 C1orf115Q9H7X2 142 aa7.78□□□□□ -1.16
NEDD9-202ENST00000379446 MAP3K2Q9Y2U5 619 aa7.78□□□□□ -1.16
NEDD9-202ENST00000379446 GTF2IP78347 998 aa7.78□□□□□ -1.16
NEDD9-202ENST00000379446 C22orf23Q9BZE7 217 aa7.78□□□□□ -1.16
NEDD9-202ENST00000379446 CROCC2H7BZ55 1655 aa7.77□□□□□ -1.16
NEDD9-202ENST00000379446 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.77□□□□□ -1.16
NEDD9-202ENST00000379446 GNAI2P04899 355 aa7.77□□□□□ -1.16
NEDD9-202ENST00000379446 GSTO1P78417 241 aa7.77□□□□□ -1.16
NEDD9-202ENST00000379446 SUPT20HL1Q3ZLR7 823 aa7.77□□□□□ -1.16
NEDD9-202ENST00000379446 TBC1D10BQ4KMP7 808 aaPredicted RBP7.77□□□□□ -1.16
NEDD9-202ENST00000379446 KRT26Q7Z3Y9 468 aa7.77□□□□□ -1.16
NEDD9-202ENST00000379446 RTKN2Q8IZC4 609 aa7.77□□□□□ -1.16
NEDD9-202ENST00000379446 LBHD1Q9BQE6 289 aaPredicted RBP7.77□□□□□ -1.16
NEDD9-202ENST00000379446 UBAC1Q9BSL1 405 aa7.77□□□□□ -1.16
NEDD9-202ENST00000379446 RRAGCQ9HB90 399 aa7.77□□□□□ -1.16
NEDD9-202ENST00000379446 RBM27Q9P2N5 1060 aaKnown RBP7.77□□□□□ -1.16
NEDD9-202ENST00000379446 NOB1Q9ULX3 412 aaKnown RBP7.77□□□□□ -1.16
NEDD9-202ENST00000379446 TTC37Q6PGP7 1564 aa7.77□□□□□ -1.17
NEDD9-202ENST00000379446 B4DLN1 442 aa7.77□□□□□ -1.17
NEDD9-202ENST00000379446 GOLGA6L22H0YM25 854 aa7.77□□□□□ -1.17
NEDD9-202ENST00000379446 MRPL12P52815 198 aaKnown RBP7.77□□□□□ -1.17
NEDD9-202ENST00000379446 EIF4A2Q14240 407 aaKnown RBP7.77□□□□□ -1.17
NEDD9-202ENST00000379446 MVPQ14764 893 aaKnown RBP7.77□□□□□ -1.17
NEDD9-202ENST00000379446 AACSQ86V21 672 aa7.77□□□□□ -1.17
NEDD9-202ENST00000379446 ERC1Q8IUD2 1116 aa7.77□□□□□ -1.17
NEDD9-202ENST00000379446 KIF16BQ96L93 1317 aa7.77□□□□□ -1.17
NEDD9-202ENST00000379446 EIF2AK4Q9P2K8 1649 aaKnown RBP7.77□□□□□ -1.17
NEDD9-202ENST00000379446 CHRNA5P30532 468 aa7.77□□□□□ -1.17
NEDD9-202ENST00000379446 ZGPATQ8N5A5 531 aaKnown RBP7.77□□□□□ -1.17
NEDD9-202ENST00000379446 DNAAF4Q8WXU2 420 aa7.77□□□□□ -1.17
NEDD9-202ENST00000379446 DBNDD1Q9H9R9 158 aa7.77□□□□□ -1.17
NEDD9-202ENST00000379446 RANBP6O60518 1105 aaKnown RBP7.77□□□□□ -1.17
NEDD9-202ENST00000379446 FOSBP53539 338 aa7.77□□□□□ -1.17
NEDD9-202ENST00000379446 RAB3GAP1Q15042 981 aa7.77□□□□□ -1.17
NEDD9-202ENST00000379446 DCAF15Q66K64 600 aa7.77□□□□□ -1.17
NEDD9-202ENST00000379446 SLC5A4Q9NY91 659 aa7.77□□□□□ -1.17
NEDD9-202ENST00000379446 DDX19BQ9UMR2 479 aa7.77□□□□□ -1.17
NEDD9-202ENST00000379446 ANGEL1Q9UNK9 670 aaKnown RBP7.77□□□□□ -1.17
NEDD9-202ENST00000379446 PIK3C2GO75747 1445 aa7.76□□□□□ -1.17
NEDD9-202ENST00000379446 ADCY10Q96PN6 1610 aa7.76□□□□□ -1.17
NEDD9-202ENST00000379446 PI4KAP2A4QPH2 592 aa7.76□□□□□ -1.17
NEDD9-202ENST00000379446 WDR63Q8IWG1 891 aa7.76□□□□□ -1.17
NEDD9-202ENST00000379446 PI4KAP1Q8N8J0 262 aa7.76□□□□□ -1.17
NEDD9-202ENST00000379446 A2ML1A8K2U0 1454 aa7.76□□□□□ -1.17
NEDD9-202ENST00000379446 H3BQV1 296 aa7.76□□□□□ -1.17
NEDD9-202ENST00000379446 POLR1AO95602 1720 aaPredicted RBP7.76□□□□□ -1.17
NEDD9-202ENST00000379446 METP08581 1390 aa7.76□□□□□ -1.17
NEDD9-202ENST00000379446 IFFO2Q5TF58 517 aa7.76□□□□□ -1.17
NEDD9-202ENST00000379446 RNF20Q5VTR2 975 aa7.76□□□□□ -1.17
NEDD9-202ENST00000379446 UPF1Q92900 1129 aaKnown RBP eCLIP7.76□□□□□ -1.17
NEDD9-202ENST00000379446 ZNF521Q96K83 1311 aa7.76□□□□□ -1.17
NEDD9-202ENST00000379446 TANGO6Q9C0B7 1094 aa7.76□□□□□ -1.17
NEDD9-202ENST00000379446 ANO2Q9NQ90 1003 aa7.76□□□□□ -1.17
NEDD9-202ENST00000379446 ZNF277Q9NRM2 450 aaPredicted RBP7.76□□□□□ -1.17
NEDD9-202ENST00000379446 HACL1Q9UJ83 578 aa7.76□□□□□ -1.17
NEDD9-202ENST00000379446 TCP10L2B9ZVM9 353 aa7.76□□□□□ -1.17
NEDD9-202ENST00000379446 SAFBQ15424 915 aaKnown RBP eCLIP7.76□□□□□ -1.171e-6■■■□□ 14.6
NEDD9-202ENST00000379446 SSH1Q8WYL5 1049 aa7.76□□□□□ -1.17
NEDD9-202ENST00000379446 TRPM1Q7Z4N2 1603 aa7.76□□□□□ -1.17
NEDD9-202ENST00000379446 EFCAB6Q5THR3 1501 aa7.76□□□□□ -1.17
NEDD9-202ENST00000379446 PALLDQ8WX93 1383 aa7.75□□□□□ -1.17
NEDD9-202ENST00000379446 CLRN2A0PK11 232 aa7.75□□□□□ -1.17
NEDD9-202ENST00000379446 RNMTO43148 476 aaKnown RBP7.75□□□□□ -1.17
NEDD9-202ENST00000379446 LDHBP07195 334 aaKnown RBP7.75□□□□□ -1.17
NEDD9-202ENST00000379446 STX8Q9UNK0 236 aa7.75□□□□□ -1.17
NEDD9-202ENST00000379446 MAST1Q9Y2H9 1570 aa7.75□□□□□ -1.17
NEDD9-202ENST00000379446 ESPNB1AK53 854 aa7.75□□□□□ -1.17
NEDD9-202ENST00000379446 HOXD10P28358 340 aa7.75□□□□□ -1.17
NEDD9-202ENST00000379446 PABPC4Q13310 644 aaKnown RBP eCLIP7.75□□□□□ -1.17
NEDD9-202ENST00000379446 CKAP2LQ8IYA6 745 aa7.75□□□□□ -1.17
NEDD9-202ENST00000379446 RAET1EQ8TD07 263 aa7.75□□□□□ -1.17
NEDD9-202ENST00000379446 ZHX3Q9H4I2 956 aa7.75□□□□□ -1.17
NEDD9-202ENST00000379446 PRDM15P57071 1507 aaPredicted RBP7.75□□□□□ -1.17
NEDD9-202ENST00000379446 KRT18P05783 430 aaKnown RBP7.75□□□□□ -1.17
NEDD9-202ENST00000379446 XBP1P17861 261 aa7.75□□□□□ -1.17
NEDD9-202ENST00000379446 ZNF790Q6PG37 636 aa7.75□□□□□ -1.17
NEDD9-202ENST00000379446 TMEM57Q8N5G2 664 aa7.75□□□□□ -1.17
NEDD9-202ENST00000379446 CUL5Q93034 780 aa7.75□□□□□ -1.17
NEDD9-202ENST00000379446 TBC1D2Q9BYX2 928 aa7.75□□□□□ -1.17
NEDD9-202ENST00000379446 VAT1LQ9HCJ6 419 aa7.75□□□□□ -1.17
NEDD9-202ENST00000379446 BRMS1Q9HCU9 246 aa7.75□□□□□ -1.17
NEDD9-202ENST00000379446 GINS2Q9Y248 185 aa7.75□□□□□ -1.17
NEDD9-202ENST00000379446 IGSF1Q8N6C5 1336 aa7.75□□□□□ -1.17
NEDD9-202ENST00000379446 F6X3S4 739 aa7.75□□□□□ -1.17
NEDD9-202ENST00000379446 PPEF1O14829 653 aaPredicted RBP7.75□□□□□ -1.17
NEDD9-202ENST00000379446 TRAK2O60296 914 aa7.75□□□□□ -1.17
NEDD9-202ENST00000379446 CELF2O95319 508 aaKnown RBP7.75□□□□□ -1.17
NEDD9-202ENST00000379446 XRCC6P12956 609 aaKnown RBP eCLIP7.75□□□□□ -1.17
NEDD9-202ENST00000379446 TMPOP42166 694 aaKnown RBP7.75□□□□□ -1.17
NEDD9-202ENST00000379446 CCT4P50991 539 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms