RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Casq1O09165 405 aa19.24■□□□□ 0.67
Trim39-203ENSMUST00000113706 Neurod6P48986 337 aa19.24■□□□□ 0.67
Trim39-203ENSMUST00000113706 Ssc5dQ8BV57 1371 aa19.24■□□□□ 0.67
Trim39-203ENSMUST00000113706 DbnlQ62418 436 aa19.24■□□□□ 0.67
Trim39-203ENSMUST00000113706 NexnQ7TPW1 607 aa19.24■□□□□ 0.67
Trim39-203ENSMUST00000113706 Ttc19Q8CC21 365 aa19.24■□□□□ 0.67
Trim39-203ENSMUST00000113706 Sult6b1P0CC03 303 aa19.23■□□□□ 0.67
Trim39-203ENSMUST00000113706 Il1rapl2Q9ERS6 686 aa19.23■□□□□ 0.67
Trim39-203ENSMUST00000113706 MccE9PWI3 1003 aa19.23■□□□□ 0.67
Trim39-203ENSMUST00000113706 Prl3d2F6R3P9 224 aa19.23■□□□□ 0.67
Trim39-203ENSMUST00000113706 Smc4Q8CG47 1286 aa19.23■□□□□ 0.67
Trim39-203ENSMUST00000113706 Igflr1Q3U4N7 345 aa19.22■□□□□ 0.67
Trim39-203ENSMUST00000113706 Mlh1Q9JK91 760 aa19.22■□□□□ 0.67
Trim39-203ENSMUST00000113706 Rad50P70388 1312 aa19.22■□□□□ 0.67
Trim39-203ENSMUST00000113706 Atg9aQ68FE2 551 aa19.22■□□□□ 0.67
Trim39-203ENSMUST00000113706 Ppp4r3aQ6P2K6 820 aa19.22■□□□□ 0.67
Trim39-203ENSMUST00000113706 Jakmip1Q8BVL9 626 aa19.22■□□□□ 0.67
Trim39-203ENSMUST00000113706 Tbc1d4Q8BYJ6 1307 aa19.21■□□□□ 0.67
Trim39-203ENSMUST00000113706 Plcb2A3KGF7 1181 aa19.21■□□□□ 0.67
Trim39-203ENSMUST00000113706 Ms4a2P20490 235 aa19.21■□□□□ 0.67
Trim39-203ENSMUST00000113706 Pde3bQ61409 1100 aa19.21■□□□□ 0.67
Trim39-203ENSMUST00000113706 Abca3Q8R420 1704 aa19.21■□□□□ 0.67
Trim39-203ENSMUST00000113706 Nlrp1aQ2LKU9 1182 aa19.21■□□□□ 0.67
Trim39-203ENSMUST00000113706 Clca2Q8BG22 942 aa19.21■□□□□ 0.67
Trim39-203ENSMUST00000113706 Bloc1s4Q8VED2 215 aa19.21■□□□□ 0.67
Trim39-203ENSMUST00000113706 Ankrd31A0A140LI88 1765 aa19.2■□□□□ 0.66
Trim39-203ENSMUST00000113706 Ppfia1B2RXQ2 1266 aa19.2■□□□□ 0.66
Trim39-203ENSMUST00000113706 Cyp19a1P28649 503 aa19.2■□□□□ 0.66
Trim39-203ENSMUST00000113706 Anapc15P60007 132 aa19.2■□□□□ 0.66
Trim39-203ENSMUST00000113706 Nlrp3Q8R4B8 1033 aa19.2■□□□□ 0.66
Trim39-203ENSMUST00000113706 Rrs1Q9CYH6 365 aaKnown RBP19.2■□□□□ 0.66
Trim39-203ENSMUST00000113706 Casz1Q9CWL2 1761 aa19.2■□□□□ 0.66
Trim39-203ENSMUST00000113706 Bsdc1Q80Y55 427 aa19.19■□□□□ 0.66
Trim39-203ENSMUST00000113706 Tmc2Q8R4P4 888 aa19.19■□□□□ 0.66
Trim39-203ENSMUST00000113706 Ric1Q69ZJ7 1422 aa19.19■□□□□ 0.66
Trim39-203ENSMUST00000113706 Greb1lB9EJV3 1913 aa19.19■□□□□ 0.66
Trim39-203ENSMUST00000113706 Irx3P81067 507 aa19.19■□□□□ 0.66
Trim39-203ENSMUST00000113706 Chmp3Q9CQ10 224 aa19.19■□□□□ 0.66
Trim39-203ENSMUST00000113706 LlphQ9D945 130 aaKnown RBP19.19■□□□□ 0.66
Trim39-203ENSMUST00000113706 Slfnl1Q8BHW9 410 aa19.18■□□□□ 0.66
Trim39-203ENSMUST00000113706 GptQ8QZR5 496 aa19.18■□□□□ 0.66
Trim39-203ENSMUST00000113706 Klc3Q91W40 508 aa19.18■□□□□ 0.66
Trim39-203ENSMUST00000113706 Top1mtQ8R4U6 593 aa19.18■□□□□ 0.66
Trim39-203ENSMUST00000113706 NfkbibQ60778 359 aa19.17■□□□□ 0.66
Trim39-203ENSMUST00000113706 Zkscan1Q8BGS3 561 aaKnown RBP19.17■□□□□ 0.66
Trim39-203ENSMUST00000113706 Rhot2Q8JZN7 620 aa19.17■□□□□ 0.66
Trim39-203ENSMUST00000113706 Prr5lA2AVJ5 370 aa19.17■□□□□ 0.66
Trim39-203ENSMUST00000113706 Eya2O08575 532 aa19.17■□□□□ 0.66
Trim39-203ENSMUST00000113706 Rbm27Q5SFM8 1060 aaKnown RBP19.17■□□□□ 0.66
Trim39-203ENSMUST00000113706 Miga2Q8BK03 593 aa19.17■□□□□ 0.66
Trim39-203ENSMUST00000113706 Rapgef4Q9EQZ6 1011 aa19.17■□□□□ 0.66
Trim39-203ENSMUST00000113706 Myh1Q5SX40 1942 aa19.17■□□□□ 0.66
Trim39-203ENSMUST00000113706 Vwa3bJ9JI28 736 aa19.16■□□□□ 0.66
Trim39-203ENSMUST00000113706 BcanQ61361 883 aa19.16■□□□□ 0.66
Trim39-203ENSMUST00000113706 AnlnQ8K298 1121 aaKnown RBP19.16■□□□□ 0.66
Trim39-203ENSMUST00000113706 Ltbp1Q8CG19 1712 aa19.16■□□□□ 0.66
Trim39-203ENSMUST00000113706 Phactr2B1AVP0 632 aa19.15■□□□□ 0.66
Trim39-203ENSMUST00000113706 Plcb3P51432 1234 aaKnown RBP19.15■□□□□ 0.66
Trim39-203ENSMUST00000113706 Fam102bQ8BQS4 339 aa19.15■□□□□ 0.66
Trim39-203ENSMUST00000113706 Bag4Q8CI61 457 aa19.15■□□□□ 0.66
Trim39-203ENSMUST00000113706 Vps54Q5SPW0 977 aa19.15■□□□□ 0.66
Trim39-203ENSMUST00000113706 Rbbp8nlA2ABX0 614 aa19.14■□□□□ 0.66
Trim39-203ENSMUST00000113706 Nol10Q5RJG1 687 aaKnown RBP19.14■□□□□ 0.66
Trim39-203ENSMUST00000113706 Ddx11Q6AXC6 880 aa19.14■□□□□ 0.66
Trim39-203ENSMUST00000113706 Sgsm1Q8BPQ7 1093 aa19.14■□□□□ 0.66
Trim39-203ENSMUST00000113706 Emilin2Q8K482 1074 aa19.14■□□□□ 0.66
Trim39-203ENSMUST00000113706 Col22a1E9Q7P1 1613 aa19.14■□□□□ 0.65
Trim39-203ENSMUST00000113706 Fkbp1aP26883 108 aaKnown RBP19.14■□□□□ 0.65
Trim39-203ENSMUST00000113706 Zdhhc9P59268 364 aa19.14■□□□□ 0.65
Trim39-203ENSMUST00000113706 Timm10P62073 90 aa19.14■□□□□ 0.65
Trim39-203ENSMUST00000113706 Ciao1Q99KN2 339 aa19.14■□□□□ 0.65
Trim39-203ENSMUST00000113706 Nhsl1Q8CAF4 1587 aa19.14■□□□□ 0.65
Trim39-203ENSMUST00000113706 Lama4P97927 1816 aa19.14■□□□□ 0.65
Trim39-203ENSMUST00000113706 Ncoa5Q91W39 579 aaKnown RBP19.13■□□□□ 0.65
Trim39-203ENSMUST00000113706 Strn4P58404 760 aa19.13■□□□□ 0.65
Trim39-203ENSMUST00000113706 Ifit2Q64112 472 aa19.13■□□□□ 0.65
Trim39-203ENSMUST00000113706 Gdpd2Q9ESM6 539 aa19.13■□□□□ 0.65
Trim39-203ENSMUST00000113706 Rtn4Q99P72 1162 aaKnown RBP19.13■□□□□ 0.65
Trim39-203ENSMUST00000113706 Cops6O88545 324 aa19.12■□□□□ 0.65
Trim39-203ENSMUST00000113706 Mdm2P23804 489 aa19.12■□□□□ 0.65
Trim39-203ENSMUST00000113706 Rasa1E9PYG6 1038 aa19.12■□□□□ 0.65
Trim39-203ENSMUST00000113706 Sema6bO54951 886 aa19.12■□□□□ 0.65
Trim39-203ENSMUST00000113706 EvcP57680 1005 aa19.12■□□□□ 0.65
Trim39-203ENSMUST00000113706 Rps6ka4Q9Z2B9 773 aa19.12■□□□□ 0.65
Trim39-203ENSMUST00000113706 Esco1Q69Z69 843 aa19.12■□□□□ 0.65
Trim39-203ENSMUST00000113706 Pdzrn3Q69ZS0 1063 aa19.12■□□□□ 0.65
Trim39-203ENSMUST00000113706 MypopQ8R4U1 393 aa19.12■□□□□ 0.65
Trim39-203ENSMUST00000113706 GakQ99KY4 1305 aa19.11■□□□□ 0.65
Trim39-203ENSMUST00000113706 Add2Q9QYB8 725 aa19.11■□□□□ 0.65
Trim39-203ENSMUST00000113706 Chmp4cQ9D7F7 232 aa19.11■□□□□ 0.65
Trim39-203ENSMUST00000113706 InhbeO08717 350 aa19.1■□□□□ 0.65
Trim39-203ENSMUST00000113706 Gsdma2Q32M21 443 aa19.1■□□□□ 0.65
Trim39-203ENSMUST00000113706 Foxo4Q9WVH3 505 aa19.1■□□□□ 0.65
Trim39-203ENSMUST00000113706 Slf2Q6P9P0 1278 aa19.1■□□□□ 0.65
Trim39-203ENSMUST00000113706 Slx4ipQ9D7Y9 413 aa19.1■□□□□ 0.65
Trim39-203ENSMUST00000113706 Cntnap1O54991 1385 aa19.1■□□□□ 0.65
Trim39-203ENSMUST00000113706 Bicdl1A0JNT9 577 aa19.1■□□□□ 0.65
Trim39-203ENSMUST00000113706 Zbtb38Q3LR78 1197 aa19.1■□□□□ 0.65
Trim39-203ENSMUST00000113706 Ddx46Q569Z5 1032 aaKnown RBP19.1■□□□□ 0.65
Trim39-203ENSMUST00000113706 Ubxn10Q8BG34 277 aa19.1■□□□□ 0.65
Retrieved 100 of 22,080 RNA–protein pairs in 19.7 ms