RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 HOM2P13663 365 aaKnown RBP0.75□□□□□ -2.29
snR50snR50 SSA4P22202 642 aaKnown RBP0.75□□□□□ -2.29
snR50snR50 VPS34P22543 875 aa0.75□□□□□ -2.29
snR50snR50 SPO11P23179 398 aa0.75□□□□□ -2.29
snR50snR50 VPS35P34110 944 aa0.75□□□□□ -2.29
snR50snR50 CTF13P35203 478 aa0.75□□□□□ -2.29
snR50snR50 ECM21P38167 1117 aaKnown RBP0.75□□□□□ -2.29
snR50snR50 SDS24P38314 527 aa0.75□□□□□ -2.29
snR50snR50 PAC2P39937 518 aa0.75□□□□□ -2.29
snR50snR50 YEL020CP39994 560 aa0.75□□□□□ -2.29
snR50snR50 ELO3P40319 345 aa0.75□□□□□ -2.29
snR50snR50 MTC3P53077 123 aa0.75□□□□□ -2.29
snR50snR50 DAM1P53267 343 aa0.75□□□□□ -2.29
snR50snR50 SIW14P53965 281 aa0.75□□□□□ -2.29
snR50snR50 SLU7Q02775 382 aaKnown RBP0.75□□□□□ -2.29
snR50snR50 DLT1Q04216 342 aa0.75□□□□□ -2.29
snR50snR50 XYL2Q07993 356 aa0.75□□□□□ -2.29
snR50snR50 OSW2Q12202 724 aa0.75□□□□□ -2.29
snR50snR50 TAF3Q12297 353 aa0.75□□□□□ -2.29
snR50snR50 YLR149CQ99296 730 aa0.75□□□□□ -2.29
snR50snR50 PGK1P00560 416 aaKnown RBP0.74□□□□□ -2.29
snR50snR50 RPL11AP0C0W9 174 aaKnown RBP0.74□□□□□ -2.29
snR50snR50 DBP5P20449 482 aaKnown RBP0.74□□□□□ -2.29
snR50snR50 SED4P25365 1065 aa0.74□□□□□ -2.29
snR50snR50 MLS1P30952 554 aa0.74□□□□□ -2.29
snR50snR50 RPC82P32349 654 aa0.74□□□□□ -2.29
snR50snR50 MKK2P32491 506 aa0.74□□□□□ -2.29
snR50snR50 MPH1P40562 993 aa0.74□□□□□ -2.29
snR50snR50 CNN1P43618 361 aa0.74□□□□□ -2.29
snR50snR50 GPI13Q07830 1017 aa0.74□□□□□ -2.29
snR50snR50 OSW1Q08692 278 aa0.74□□□□□ -2.29
snR50snR50 NEW1Q08972 1196 aaKnown RBP0.74□□□□□ -2.29
snR50snR50 TRM11Q12463 433 aa0.74□□□□□ -2.29
snR50snR50 RPL11BQ3E757 174 aaPredicted RBP0.74□□□□□ -2.29
snR50snR50 YOR111WQ99210 232 aa0.74□□□□□ -2.29
snR50snR50 CAF20P12962 161 aaKnown RBP0.73□□□□□ -2.29
snR50snR50 SYP1P25623 870 aaKnown RBP0.73□□□□□ -2.29
snR50snR50 FUN30P31380 1131 aa0.73□□□□□ -2.29
snR50snR50 GCD6P32501 712 aaKnown RBP0.73□□□□□ -2.29
snR50snR50 EMP70P32802 667 aa0.73□□□□□ -2.29
snR50snR50 UGA4P32837 571 aa0.73□□□□□ -2.29
snR50snR50 PCL5P38794 229 aa0.73□□□□□ -2.29
snR50snR50 PNT1P38969 423 aa0.73□□□□□ -2.29
snR50snR50 IRC8P47046 822 aa0.73□□□□□ -2.29
snR50snR50 MRK1P50873 501 aa0.73□□□□□ -2.29
snR50snR50 KAR5Q04746 504 aa0.73□□□□□ -2.29
snR50snR50 DAL4Q04895 635 aa0.73□□□□□ -2.29
snR50snR50 WHI4Q07655 649 aaKnown RBP0.73□□□□□ -2.29
snR50snR50 SGO1Q08490 590 aa0.73□□□□□ -2.29
snR50snR50 GNT1Q12096 491 aa0.73□□□□□ -2.29
snR50snR50 TRL1P09880 827 aaKnown RBP0.72□□□□□ -2.29
snR50snR50 DBP2P24783 546 aaKnown RBP0.72□□□□□ -2.29
snR50snR50 SRP101P32916 621 aa0.72□□□□□ -2.29
snR50snR50 YOX1P34161 385 aa0.72□□□□□ -2.29
snR50snR50 YJL206CP39529 758 aa0.72□□□□□ -2.29
snR50snR50 HXT13P39924 564 aa0.72□□□□□ -2.29
snR50snR50 MXR1P40029 184 aa0.72□□□□□ -2.29
snR50snR50 PIC2P40035 300 aa0.72□□□□□ -2.29
snR50snR50 YJL163CP46996 555 aa0.72□□□□□ -2.29
snR50snR50 AMA1P50082 593 aa0.72□□□□□ -2.29
snR50snR50 HXT17P53631 564 aa0.72□□□□□ -2.29
snR50snR50 HXT15P54854 567 aa0.72□□□□□ -2.29
snR50snR50 SMX3P54999 86 aaPredicted RBP0.72□□□□□ -2.29
snR50snR50 SSL2Q00578 843 aa0.72□□□□□ -2.29
snR50snR50 ROD1Q02805 837 aa0.72□□□□□ -2.29
snR50snR50 PEX19Q07418 342 aa0.72□□□□□ -2.29
snR50snR50 MDM38Q08179 573 aa0.72□□□□□ -2.29
snR50snR50 DED1P06634 604 aaKnown RBP0.71□□□□□ -2.3
snR50snR50 FBP1P09201 348 aa0.71□□□□□ -2.3
snR50snR50 SEC21P32074 935 aaKnown RBP0.71□□□□□ -2.3
snR50snR50 YBR053CP38235 358 aa0.71□□□□□ -2.3
snR50snR50 XBP1P40489 647 aa0.71□□□□□ -2.3
snR50snR50 GNP1P48813 663 aa0.71□□□□□ -2.3
snR50snR50 NMA2P53204 395 aa0.71□□□□□ -2.3
snR50snR50 YAP1802P53309 568 aa0.71□□□□□ -2.3
snR50snR50 SRT1Q03175 343 aa0.71□□□□□ -2.3
snR50snR50 SCW10Q04951 389 aa0.71□□□□□ -2.3
snR50snR50 SLK19Q08581 821 aaKnown RBP0.71□□□□□ -2.3
snR50snR50 HXK1P04806 485 aaKnown RBP0.7□□□□□ -2.3
snR50snR50 PHO4P07270 312 aaKnown RBP0.7□□□□□ -2.3
snR50snR50 SEC8P32855 1065 aa0.7□□□□□ -2.3
snR50snR50 GIC1P38785 314 aa0.7□□□□□ -2.3
snR50snR50 FMP52P40008 231 aa0.7□□□□□ -2.3
snR50snR50 SDP1P40479 209 aa0.7□□□□□ -2.3
snR50snR50 CCT7P42943 550 aaKnown RBP0.7□□□□□ -2.3
snR50snR50 YGL176CP46945 554 aa0.7□□□□□ -2.3
snR50snR50 MUP1P50276 574 aa0.7□□□□□ -2.3
snR50snR50 TEL2P53038 688 aa0.7□□□□□ -2.3
snR50snR50 YGR053CP53234 283 aa0.7□□□□□ -2.3
snR50snR50 OXR1Q08952 273 aa0.7□□□□□ -2.3
snR50snR50 MCD1Q12158 566 aa0.7□□□□□ -2.3
snR50snR50 TUB3P09734 445 aaKnown RBP0.69□□□□□ -2.3
snR50snR50 APN1P22936 367 aa0.69□□□□□ -2.3
snR50snR50 YKL151CP36059 337 aa0.69□□□□□ -2.3
snR50snR50 PXL1P36166 706 aa0.69□□□□□ -2.3
snR50snR50 CTF8P38877 133 aa0.69□□□□□ -2.3
snR50snR50 BDH2P39713 417 aa0.69□□□□□ -2.3
snR50snR50 ULP2P40537 1034 aaPredicted RBP0.69□□□□□ -2.3
snR50snR50 YIR042CP40586 236 aa0.69□□□□□ -2.3
snR50snR50 MDJ2P42834 146 aa0.69□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 33.8 ms