RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR50, Length 90 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR50	snR50	HOM2	P13663	365 aa	Known RBP	0.75	□□□□□ -2.29
snR50	snR50	SSA4	P22202	642 aa	Known RBP	0.75	□□□□□ -2.29
snR50	snR50	VPS34	P22543	875 aa		0.75	□□□□□ -2.29
snR50	snR50	SPO11	P23179	398 aa		0.75	□□□□□ -2.29
snR50	snR50	VPS35	P34110	944 aa		0.75	□□□□□ -2.29
snR50	snR50	CTF13	P35203	478 aa		0.75	□□□□□ -2.29
snR50	snR50	ECM21	P38167	1117 aa	Known RBP	0.75	□□□□□ -2.29
snR50	snR50	SDS24	P38314	527 aa		0.75	□□□□□ -2.29
snR50	snR50	PAC2	P39937	518 aa		0.75	□□□□□ -2.29
snR50	snR50	YEL020C	P39994	560 aa		0.75	□□□□□ -2.29
snR50	snR50	ELO3	P40319	345 aa		0.75	□□□□□ -2.29
snR50	snR50	MTC3	P53077	123 aa		0.75	□□□□□ -2.29
snR50	snR50	DAM1	P53267	343 aa		0.75	□□□□□ -2.29
snR50	snR50	SIW14	P53965	281 aa		0.75	□□□□□ -2.29
snR50	snR50	SLU7	Q02775	382 aa	Known RBP	0.75	□□□□□ -2.29
snR50	snR50	DLT1	Q04216	342 aa		0.75	□□□□□ -2.29
snR50	snR50	XYL2	Q07993	356 aa		0.75	□□□□□ -2.29
snR50	snR50	OSW2	Q12202	724 aa		0.75	□□□□□ -2.29
snR50	snR50	TAF3	Q12297	353 aa		0.75	□□□□□ -2.29
snR50	snR50	YLR149C	Q99296	730 aa		0.75	□□□□□ -2.29
snR50	snR50	PGK1	P00560	416 aa	Known RBP	0.74	□□□□□ -2.29
snR50	snR50	RPL11A	P0C0W9	174 aa	Known RBP	0.74	□□□□□ -2.29
snR50	snR50	DBP5	P20449	482 aa	Known RBP	0.74	□□□□□ -2.29
snR50	snR50	SED4	P25365	1065 aa		0.74	□□□□□ -2.29
snR50	snR50	MLS1	P30952	554 aa		0.74	□□□□□ -2.29
snR50	snR50	RPC82	P32349	654 aa		0.74	□□□□□ -2.29
snR50	snR50	MKK2	P32491	506 aa		0.74	□□□□□ -2.29
snR50	snR50	MPH1	P40562	993 aa		0.74	□□□□□ -2.29
snR50	snR50	CNN1	P43618	361 aa		0.74	□□□□□ -2.29
snR50	snR50	GPI13	Q07830	1017 aa		0.74	□□□□□ -2.29
snR50	snR50	OSW1	Q08692	278 aa		0.74	□□□□□ -2.29
snR50	snR50	NEW1	Q08972	1196 aa	Known RBP	0.74	□□□□□ -2.29
snR50	snR50	TRM11	Q12463	433 aa		0.74	□□□□□ -2.29
snR50	snR50	RPL11B	Q3E757	174 aa	Predicted RBP	0.74	□□□□□ -2.29
snR50	snR50	YOR111W	Q99210	232 aa		0.74	□□□□□ -2.29
snR50	snR50	CAF20	P12962	161 aa	Known RBP	0.73	□□□□□ -2.29
snR50	snR50	SYP1	P25623	870 aa	Known RBP	0.73	□□□□□ -2.29
snR50	snR50	FUN30	P31380	1131 aa		0.73	□□□□□ -2.29
snR50	snR50	GCD6	P32501	712 aa	Known RBP	0.73	□□□□□ -2.29
snR50	snR50	EMP70	P32802	667 aa		0.73	□□□□□ -2.29
snR50	snR50	UGA4	P32837	571 aa		0.73	□□□□□ -2.29
snR50	snR50	PCL5	P38794	229 aa		0.73	□□□□□ -2.29
snR50	snR50	PNT1	P38969	423 aa		0.73	□□□□□ -2.29
snR50	snR50	IRC8	P47046	822 aa		0.73	□□□□□ -2.29
snR50	snR50	MRK1	P50873	501 aa		0.73	□□□□□ -2.29
snR50	snR50	KAR5	Q04746	504 aa		0.73	□□□□□ -2.29
snR50	snR50	DAL4	Q04895	635 aa		0.73	□□□□□ -2.29
snR50	snR50	WHI4	Q07655	649 aa	Known RBP	0.73	□□□□□ -2.29
snR50	snR50	SGO1	Q08490	590 aa		0.73	□□□□□ -2.29
snR50	snR50	GNT1	Q12096	491 aa		0.73	□□□□□ -2.29
snR50	snR50	TRL1	P09880	827 aa	Known RBP	0.72	□□□□□ -2.29
snR50	snR50	DBP2	P24783	546 aa	Known RBP	0.72	□□□□□ -2.29
snR50	snR50	SRP101	P32916	621 aa		0.72	□□□□□ -2.29
snR50	snR50	YOX1	P34161	385 aa		0.72	□□□□□ -2.29
snR50	snR50	YJL206C	P39529	758 aa		0.72	□□□□□ -2.29
snR50	snR50	HXT13	P39924	564 aa		0.72	□□□□□ -2.29
snR50	snR50	MXR1	P40029	184 aa		0.72	□□□□□ -2.29
snR50	snR50	PIC2	P40035	300 aa		0.72	□□□□□ -2.29
snR50	snR50	YJL163C	P46996	555 aa		0.72	□□□□□ -2.29
snR50	snR50	AMA1	P50082	593 aa		0.72	□□□□□ -2.29
snR50	snR50	HXT17	P53631	564 aa		0.72	□□□□□ -2.29
snR50	snR50	HXT15	P54854	567 aa		0.72	□□□□□ -2.29
snR50	snR50	SMX3	P54999	86 aa	Predicted RBP	0.72	□□□□□ -2.29
snR50	snR50	SSL2	Q00578	843 aa		0.72	□□□□□ -2.29
snR50	snR50	ROD1	Q02805	837 aa		0.72	□□□□□ -2.29
snR50	snR50	PEX19	Q07418	342 aa		0.72	□□□□□ -2.29
snR50	snR50	MDM38	Q08179	573 aa		0.72	□□□□□ -2.29
snR50	snR50	DED1	P06634	604 aa	Known RBP	0.71	□□□□□ -2.3
snR50	snR50	FBP1	P09201	348 aa		0.71	□□□□□ -2.3
snR50	snR50	SEC21	P32074	935 aa	Known RBP	0.71	□□□□□ -2.3
snR50	snR50	YBR053C	P38235	358 aa		0.71	□□□□□ -2.3
snR50	snR50	XBP1	P40489	647 aa		0.71	□□□□□ -2.3
snR50	snR50	GNP1	P48813	663 aa		0.71	□□□□□ -2.3
snR50	snR50	NMA2	P53204	395 aa		0.71	□□□□□ -2.3
snR50	snR50	YAP1802	P53309	568 aa		0.71	□□□□□ -2.3
snR50	snR50	SRT1	Q03175	343 aa		0.71	□□□□□ -2.3
snR50	snR50	SCW10	Q04951	389 aa		0.71	□□□□□ -2.3
snR50	snR50	SLK19	Q08581	821 aa	Known RBP	0.71	□□□□□ -2.3
snR50	snR50	HXK1	P04806	485 aa	Known RBP	0.7	□□□□□ -2.3
snR50	snR50	PHO4	P07270	312 aa	Known RBP	0.7	□□□□□ -2.3
snR50	snR50	SEC8	P32855	1065 aa		0.7	□□□□□ -2.3
snR50	snR50	GIC1	P38785	314 aa		0.7	□□□□□ -2.3
snR50	snR50	FMP52	P40008	231 aa		0.7	□□□□□ -2.3
snR50	snR50	SDP1	P40479	209 aa		0.7	□□□□□ -2.3
snR50	snR50	CCT7	P42943	550 aa	Known RBP	0.7	□□□□□ -2.3
snR50	snR50	YGL176C	P46945	554 aa		0.7	□□□□□ -2.3
snR50	snR50	MUP1	P50276	574 aa		0.7	□□□□□ -2.3
snR50	snR50	TEL2	P53038	688 aa		0.7	□□□□□ -2.3
snR50	snR50	YGR053C	P53234	283 aa		0.7	□□□□□ -2.3
snR50	snR50	OXR1	Q08952	273 aa		0.7	□□□□□ -2.3
snR50	snR50	MCD1	Q12158	566 aa		0.7	□□□□□ -2.3
snR50	snR50	TUB3	P09734	445 aa	Known RBP	0.69	□□□□□ -2.3
snR50	snR50	APN1	P22936	367 aa		0.69	□□□□□ -2.3
snR50	snR50	YKL151C	P36059	337 aa		0.69	□□□□□ -2.3
snR50	snR50	PXL1	P36166	706 aa		0.69	□□□□□ -2.3
snR50	snR50	CTF8	P38877	133 aa		0.69	□□□□□ -2.3
snR50	snR50	BDH2	P39713	417 aa		0.69	□□□□□ -2.3
snR50	snR50	ULP2	P40537	1034 aa	Predicted RBP	0.69	□□□□□ -2.3
snR50	snR50	YIR042C	P40586	236 aa		0.69	□□□□□ -2.3
snR50	snR50	MDJ2	P42834	146 aa		0.69	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 40.4 ms