RNA–Protein interactions for RNA: YPR054W

SMK1, Transcript of Middle sporulation-specific mitogen-activated protein kinase (MAPK), yeastyeast

Gene SMK1, Length 1,167 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMK1YPR054W TFC3P34111 1160 aa7.35□□□□□ -1.23
SMK1YPR054W UBX7P38349 436 aa7.35□□□□□ -1.23
SMK1YPR054W SIT1P39980 628 aa7.35□□□□□ -1.23
SMK1YPR054W YFL034WP43564 1073 aa7.35□□□□□ -1.23
SMK1YPR054W ROM1P53046 1155 aa7.35□□□□□ -1.23
SMK1YPR054W ALD3P54114 506 aa7.35□□□□□ -1.23
SMK1YPR054W FAR8Q05040 523 aa7.35□□□□□ -1.23
SMK1YPR054W RSA3Q05942 220 aaKnown RBP7.35□□□□□ -1.23
SMK1YPR054W NOB1Q08444 459 aaKnown RBP7.35□□□□□ -1.23
SMK1YPR054W PIF1P07271 859 aa7.34□□□□□ -1.23
SMK1YPR054W CKI1P20485 582 aa7.34□□□□□ -1.23
SMK1YPR054W SPO11P23179 398 aa7.34□□□□□ -1.23
SMK1YPR054W DAL1P32375 460 aa7.34□□□□□ -1.23
SMK1YPR054W SAC6P32599 642 aaKnown RBP7.34□□□□□ -1.23
SMK1YPR054W YET1P35723 206 aa7.34□□□□□ -1.23
SMK1YPR054W LIN1P38852 340 aaPredicted RBP7.34□□□□□ -1.23
SMK1YPR054W EPL1P43572 832 aa7.34□□□□□ -1.23
SMK1YPR054W FYV8P46949 817 aaKnown RBP7.34□□□□□ -1.23
SMK1YPR054W YJR008WP47085 338 aa7.34□□□□□ -1.23
SMK1YPR054W ENP2P48234 707 aaKnown RBP7.34□□□□□ -1.23
SMK1YPR054W CUE3P53137 624 aaKnown RBP7.34□□□□□ -1.23
SMK1YPR054W ZDS2P54786 942 aa7.34□□□□□ -1.23
SMK1YPR054W BET4Q00618 327 aa7.34□□□□□ -1.23
SMK1YPR054W RRP6Q12149 733 aaKnown RBP7.34□□□□□ -1.23
SMK1YPR054W TY1A-DR3Q12441 440 aa7.34□□□□□ -1.23
SMK1YPR054W HAP4P14064 554 aa7.33□□□□□ -1.24
SMK1YPR054W SSA4P22202 642 aaKnown RBP7.33□□□□□ -1.24
SMK1YPR054W RPL5P26321 297 aaKnown RBP7.33□□□□□ -1.24
SMK1YPR054W NUF2P33895 451 aa7.33□□□□□ -1.24
SMK1YPR054W OSH3P38713 996 aaKnown RBP7.33□□□□□ -1.24
SMK1YPR054W TDA3P38758 523 aa7.33□□□□□ -1.24
SMK1YPR054W PIH1P38768 344 aa7.33□□□□□ -1.24
SMK1YPR054W CTM1P38818 585 aa7.33□□□□□ -1.24
SMK1YPR054W TMA22P47089 198 aaPredicted RBP7.33□□□□□ -1.24
SMK1YPR054W FAR11P53917 953 aa7.33□□□□□ -1.24
SMK1YPR054W YPL109CQ02981 657 aa7.33□□□□□ -1.24
SMK1YPR054W YML119WQ03208 357 aa7.33□□□□□ -1.24
SMK1YPR054W UTP5Q04177 643 aaKnown RBP7.33□□□□□ -1.24
SMK1YPR054W YKU80Q04437 629 aa7.33□□□□□ -1.24
SMK1YPR054W SPC24Q04477 213 aa7.33□□□□□ -1.24
SMK1YPR054W POB3Q04636 552 aaKnown RBP7.33□□□□□ -1.24
SMK1YPR054W ESF1Q06344 628 aaKnown RBP7.33□□□□□ -1.24
SMK1YPR054W MAG2Q06436 670 aaKnown RBP7.33□□□□□ -1.24
SMK1YPR054W ARG4P04076 463 aaPredicted RBP7.32□□□□□ -1.24
SMK1YPR054W CYT1P07143 309 aa7.32□□□□□ -1.24
SMK1YPR054W LPD1P09624 499 aaKnown RBP7.32□□□□□ -1.24
SMK1YPR054W SPO12P17123 173 aa7.32□□□□□ -1.24
SMK1YPR054W CBP3P21560 335 aa7.32□□□□□ -1.24
SMK1YPR054W URA1P28272 314 aaPredicted RBP7.32□□□□□ -1.24
SMK1YPR054W IMP2'P32351 346 aa7.32□□□□□ -1.24
SMK1YPR054W SLA1P32790 1244 aa7.32□□□□□ -1.24
SMK1YPR054W UGA2P38067 497 aa7.32□□□□□ -1.24
SMK1YPR054W LAM1P38851 1228 aa7.32□□□□□ -1.24
SMK1YPR054W MAD1P40957 749 aa7.32□□□□□ -1.24
SMK1YPR054W INP52P50942 1183 aa7.32□□□□□ -1.24
SMK1YPR054W YGR035CP53222 116 aa7.32□□□□□ -1.24
SMK1YPR054W ZPR1P53303 486 aaKnown RBP7.32□□□□□ -1.24
SMK1YPR054W NAM8Q00539 523 aaKnown RBP7.32□□□□□ -1.24
SMK1YPR054W GTR1Q00582 310 aa7.32□□□□□ -1.24
SMK1YPR054W TY1A-MR1Q04215 440 aa7.32□□□□□ -1.24
SMK1YPR054W HPF1Q05164 967 aa7.32□□□□□ -1.24
SMK1YPR054W YPQ2Q06328 317 aa7.32□□□□□ -1.24
SMK1YPR054W NEW1Q08972 1196 aaKnown RBP7.32□□□□□ -1.24
SMK1YPR054W UTP10P42945 1769 aaKnown RBP7.32□□□□□ -1.24
SMK1YPR054W CDC19P00549 500 aaKnown RBP7.31□□□□□ -1.24
SMK1YPR054W RPB2P08518 1224 aaKnown RBP7.31□□□□□ -1.24
SMK1YPR054W YMR085WP0CF18 432 aa7.31□□□□□ -1.24
SMK1YPR054W TAL1P15019 335 aaKnown RBP7.31□□□□□ -1.24
SMK1YPR054W OPI1P21957 404 aa7.31□□□□□ -1.24
SMK1YPR054W VAN1P23642 535 aa7.31□□□□□ -1.24
SMK1YPR054W SQT1P35184 431 aa7.31□□□□□ -1.24
SMK1YPR054W LAS1P36146 502 aaPredicted RBP7.31□□□□□ -1.24
SMK1YPR054W TOM71P38825 639 aaKnown RBP7.31□□□□□ -1.24
SMK1YPR054W REV7P38927 245 aa7.31□□□□□ -1.24
SMK1YPR054W MDJ2P42834 146 aa7.31□□□□□ -1.24
SMK1YPR054W MSN5P52918 1224 aa7.31□□□□□ -1.24
SMK1YPR054W VTI1Q04338 217 aa7.31□□□□□ -1.24
SMK1YPR054W YLR287CQ05881 355 aa7.31□□□□□ -1.24
SMK1YPR054W SUB2Q07478 446 aaKnown RBP7.31□□□□□ -1.24
SMK1YPR054W SLK19Q08581 821 aaKnown RBP7.31□□□□□ -1.24
SMK1YPR054W APL5Q08951 932 aaKnown RBP7.31□□□□□ -1.24
SMK1YPR054W SSK22P25390 1331 aaPredicted RBP7.3□□□□□ -1.24
SMK1YPR054W TUP1P16649 713 aa7.3□□□□□ -1.24
SMK1YPR054W BMH1P29311 267 aaKnown RBP7.3□□□□□ -1.24
SMK1YPR054W LHS1P36016 881 aa7.3□□□□□ -1.24
SMK1YPR054W ECM4P36156 370 aa7.3□□□□□ -1.24
SMK1YPR054W HEK2P38199 381 aaKnown RBP RIP-Chip data7.3□□□□□ -1.24not detected
SMK1YPR054W SPP381P38282 291 aaPredicted RBP7.3□□□□□ -1.24
SMK1YPR054W BEM4P39011 633 aa7.3□□□□□ -1.24
SMK1YPR054W YMR124WP39523 943 aaKnown RBP7.3□□□□□ -1.24
SMK1YPR054W AXL1P40851 1208 aa7.3□□□□□ -1.24
SMK1YPR054W VTC4P47075 721 aa7.3□□□□□ -1.24
SMK1YPR054W ARI1P53111 347 aaKnown RBP7.3□□□□□ -1.24
SMK1YPR054W PCL10P53124 433 aa7.3□□□□□ -1.24
SMK1YPR054W ADE16P54113 591 aaKnown RBP7.3□□□□□ -1.24
SMK1YPR054W MRD1Q06106 887 aaKnown RBP7.3□□□□□ -1.24
SMK1YPR054W YLR001CQ07895 862 aa7.3□□□□□ -1.24
SMK1YPR054W TAF10Q12030 206 aa7.3□□□□□ -1.24
SMK1YPR054W GNT1Q12096 491 aa7.3□□□□□ -1.24
SMK1YPR054W FKS3Q04952 1785 aa7.3□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 32.2 ms