RNA–Protein interactions for RNA: YOR124C

UBP2, Transcript of Ubiquitin-specific protease, yeast

Gene UBP2, Length 3,819 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP2	YOR124C	SSK22	P25390	1331 aa	Predicted RBP	2.25	□□□□□ -2.05
UBP2	YOR124C	HTA1	P04911	132 aa	Known RBP	2.24	□□□□□ -2.05
UBP2	YOR124C	HTA2	P04912	132 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	ILV2	P07342	687 aa	Known RBP	2.24	□□□□□ -2.05
UBP2	YOR124C	LPD1	P09624	499 aa	Known RBP	2.24	□□□□□ -2.05
UBP2	YOR124C	GCD2	P12754	651 aa	Predicted RBP	2.24	□□□□□ -2.05
UBP2	YOR124C	HCA4	P20448	770 aa	Known RBP	2.24	□□□□□ -2.05
UBP2	YOR124C	PYC2	P32327	1180 aa	Known RBP	2.24	□□□□□ -2.05
UBP2	YOR124C	YME1	P32795	747 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	SLA2	P33338	968 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	DUR3	P33413	735 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	MFT1	P33441	392 aa	Known RBP	2.24	□□□□□ -2.05
UBP2	YOR124C	BMH2	P34730	273 aa	Known RBP	2.24	□□□□□ -2.05
UBP2	YOR124C	HES1	P35843	434 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	YKR015C	P36111	568 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	YHR131C	P38835	850 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	HXT6	P39003	570 aa	Known RBP	2.24	□□□□□ -2.05
UBP2	YOR124C	HXT7	P39004	570 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	ATG3	P40344	310 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	KTR7	P40504	517 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	LYS14	P40971	790 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	SEC26	P41810	973 aa	Known RBP	2.24	□□□□□ -2.05
UBP2	YOR124C	BDP1	P46678	594 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	YGR122W	P53272	402 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	YNL058C	P53947	316 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	SYH1	Q02875	849 aa	Known RBP	2.24	□□□□□ -2.05
UBP2	YOR124C	CDC73	Q06697	393 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	ARG4	P04076	463 aa	Predicted RBP	2.24	□□□□□ -2.05
UBP2	YOR124C	TOP1	P04786	769 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	PRT1	P06103	763 aa	Known RBP	2.24	□□□□□ -2.05
UBP2	YOR124C	RAD53	P22216	821 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	SEC20	P28791	383 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	SRB4	P32569	687 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	HCS1	P34243	683 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	AST1	P35183	429 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	OAF3	P36023	863 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	RRP14	P36080	434 aa	Known RBP	2.24	□□□□□ -2.05
UBP2	YOR124C	UGA2	P38067	497 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	GLO3	P38682	493 aa	Known RBP	2.24	□□□□□ -2.05
UBP2	YOR124C	RTS1	P38903	757 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	FIG4	P42837	879 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	GCD14	P46959	383 aa	Predicted RBP	2.24	□□□□□ -2.05
UBP2	YOR124C	ENP2	P48234	707 aa	Known RBP	2.24	□□□□□ -2.05
UBP2	YOR124C	YGR237C	P50089	785 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	HST2	P53686	357 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	YMR187C	Q03236	431 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	USA1	Q03714	838 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	TDA9	Q04545	1251 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	ATG26	Q06321	1198 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	VAM6	Q07468	1049 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	VIK1	Q12045	647 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	SLX4	Q12098	748 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	CHS5	Q12114	671 aa	Known RBP	2.24	□□□□□ -2.05
UBP2	YOR124C	SGT2	Q12118	346 aa	Known RBP	2.24	□□□□□ -2.05
UBP2	YOR124C	MSH5	Q12175	901 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	CLF1	Q12309	687 aa	Predicted RBP	2.24	□□□□□ -2.05
UBP2	YOR124C	ECM29	P38737	1868 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	ATP2	P00830	511 aa	Known RBP	2.24	□□□□□ -2.05
UBP2	YOR124C	YML002W	P0CF17	737 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	HEM15	P16622	393 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	SPO12	P17123	173 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	ESS1	P22696	170 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	CAP1	P28495	268 aa	Known RBP	2.24	□□□□□ -2.05
UBP2	YOR124C	MVD1	P32377	396 aa	Known RBP	2.24	□□□□□ -2.05
UBP2	YOR124C	UTP11	P34247	250 aa	Predicted RBP	2.24	□□□□□ -2.05
UBP2	YOR124C	YET1	P35723	206 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	SPP381	P38282	291 aa	Predicted RBP	2.24	□□□□□ -2.05
UBP2	YOR124C	BRL1	P38770	471 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	YEL023C	P39992	682 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	YRB1	P41920	201 aa	Known RBP	2.24	□□□□□ -2.05
UBP2	YOR124C	YNL320W	P42840	284 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	SHE4	P51534	789 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	NUT1	P53114	1132 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	HOP2	P53187	214 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	PAP2	P53632	584 aa	Known RBP	2.24	□□□□□ -2.05
UBP2	YOR124C	DSL1	P53847	754 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	YNL115C	P53925	644 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	LGE1	Q02796	332 aa	Known RBP	2.24	□□□□□ -2.05
UBP2	YOR124C	YMR196W	Q04336	1088 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	YLR326W	Q06170	240 aa	Known RBP	2.24	□□□□□ -2.05
UBP2	YOR124C	GET3	Q12154	354 aa	Known RBP	2.24	□□□□□ -2.05
UBP2	YOR124C	YLR278C	Q05854	1341 aa		2.24	□□□□□ -2.05
UBP2	YOR124C	ERG11	P10614	530 aa		2.23	□□□□□ -2.05
UBP2	YOR124C	PRP9	P19736	530 aa	Known RBP	2.23	□□□□□ -2.05
UBP2	YOR124C	MSB1	P21339	1137 aa	Known RBP	2.23	□□□□□ -2.05
UBP2	YOR124C	CDC60	P26637	1090 aa	Known RBP	2.23	□□□□□ -2.05
UBP2	YOR124C	SIN4	P32259	974 aa		2.23	□□□□□ -2.05
UBP2	YOR124C	SMY1	P32364	656 aa	Known RBP	2.23	□□□□□ -2.05
UBP2	YOR124C	RPS0A	P32905	252 aa	Known RBP	2.23	□□□□□ -2.05
UBP2	YOR124C	ATO2	P32907	282 aa		2.23	□□□□□ -2.05
UBP2	YOR124C	ECM4	P36156	370 aa		2.23	□□□□□ -2.05
UBP2	YOR124C	GRX7	P38068	203 aa		2.23	□□□□□ -2.05
UBP2	YOR124C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	2.23	□□□□□ -2.05	RIP-Chip
UBP2	YOR124C	SOL3	P38858	249 aa		2.23	□□□□□ -2.05
UBP2	YOR124C	JEM1	P40358	645 aa		2.23	□□□□□ -2.05
UBP2	YOR124C	MKT1	P40850	830 aa	Known RBP	2.23	□□□□□ -2.05
UBP2	YOR124C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	2.23	□□□□□ -2.05	not detected
UBP2	YOR124C	RBL2	P48606	106 aa	Known RBP	2.23	□□□□□ -2.05
UBP2	YOR124C	NUP42	P49686	430 aa	Known RBP	2.23	□□□□□ -2.05
UBP2	YOR124C	UBP15	P50101	1230 aa		2.23	□□□□□ -2.05

Retrieved 100 of 5,963 RNA–protein pairs in 62.1 ms