RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C ALG2P43636 503 aa5.74□□□□□ -1.49
RAT1YOR048C SUM1P46676 1062 aa5.74□□□□□ -1.49
RAT1YOR048C YLR177WQ06251 628 aa5.74□□□□□ -1.49
RAT1YOR048C UTP4Q06679 776 aaKnown RBP5.74□□□□□ -1.49
RAT1YOR048C TRP2P00899 507 aaKnown RBP5.74□□□□□ -1.49
RAT1YOR048C CLN3P13365 580 aa5.74□□□□□ -1.49
RAT1YOR048C OLA1P38219 394 aaKnown RBP5.74□□□□□ -1.49
RAT1YOR048C NUG1P40010 520 aaKnown RBP5.74□□□□□ -1.49
RAT1YOR048C SEC26P41810 973 aaKnown RBP5.74□□□□□ -1.49
RAT1YOR048C RET3P53600 189 aa5.74□□□□□ -1.49
RAT1YOR048C OSW1Q08692 278 aa5.74□□□□□ -1.49
RAT1YOR048C PMR1P13586 950 aa5.74□□□□□ -1.49
RAT1YOR048C PGM2P37012 569 aaKnown RBP5.74□□□□□ -1.49
RAT1YOR048C SMC2P38989 1170 aaKnown RBP5.74□□□□□ -1.49
RAT1YOR048C RPC17P47076 161 aa5.74□□□□□ -1.49
RAT1YOR048C YML082WQ04533 649 aaKnown RBP5.74□□□□□ -1.49
RAT1YOR048C WRS1Q12109 432 aaKnown RBP5.74□□□□□ -1.49
RAT1YOR048C BUG1Q12191 341 aa5.74□□□□□ -1.49
RAT1YOR048C ECM2P38241 364 aaKnown RBP5.73□□□□□ -1.49
RAT1YOR048C GAA1P39012 614 aa5.73□□□□□ -1.49
RAT1YOR048C LCP5P40079 357 aaPredicted RBP5.73□□□□□ -1.49
RAT1YOR048C UBP6P43593 499 aaKnown RBP5.73□□□□□ -1.49
RAT1YOR048C RSM26P47141 266 aa5.73□□□□□ -1.49
RAT1YOR048C BTN2P53286 410 aa5.73□□□□□ -1.49
RAT1YOR048C BET4Q00618 327 aa5.73□□□□□ -1.49
RAT1YOR048C TFB2Q02939 513 aa5.73□□□□□ -1.49
RAT1YOR048C PRP3Q03338 469 aaPredicted RBP5.73□□□□□ -1.49
RAT1YOR048C AIM41Q12032 185 aa5.73□□□□□ -1.49
RAT1YOR048C PUS1Q12211 544 aaKnown RBP5.73□□□□□ -1.49
RAT1YOR048C RKM4Q12504 494 aa5.73□□□□□ -1.49
RAT1YOR048C GCG1P32656 232 aaKnown RBP5.73□□□□□ -1.49
RAT1YOR048C SAS3P34218 831 aa5.73□□□□□ -1.49
RAT1YOR048C SUL1P38359 859 aa5.73□□□□□ -1.49
RAT1YOR048C TFG1P41895 735 aaPredicted RBP5.73□□□□□ -1.49
RAT1YOR048C CSM3Q04659 317 aa5.73□□□□□ -1.49
RAT1YOR048C ECI1Q05871 280 aa5.73□□□□□ -1.49
RAT1YOR048C ALR1Q08269 859 aa5.73□□□□□ -1.49
RAT1YOR048C CBF1P17106 351 aa5.72□□□□□ -1.49
RAT1YOR048C EXO5P38289 585 aa5.72□□□□□ -1.49
RAT1YOR048C YMR1P47147 688 aaKnown RBP RIP-Chip data5.72□□□□□ -1.49not detected
RAT1YOR048C ZIP2P53061 704 aa5.72□□□□□ -1.49
RAT1YOR048C YPR078CQ06813 372 aa5.72□□□□□ -1.49
RAT1YOR048C LAP2Q10740 671 aa5.72□□□□□ -1.49
RAT1YOR048C FAL1Q12099 399 aaKnown RBP5.72□□□□□ -1.49
RAT1YOR048C SPT5P27692 1063 aaKnown RBP5.72□□□□□ -1.49
RAT1YOR048C HXT1P32465 570 aa5.72□□□□□ -1.49
RAT1YOR048C THI6P41835 540 aa5.72□□□□□ -1.49
RAT1YOR048C ATP25Q03153 612 aa5.72□□□□□ -1.49
RAT1YOR048C OPY2Q06810 360 aa5.72□□□□□ -1.49
RAT1YOR048C SPO21Q12411 609 aa5.72□□□□□ -1.49
RAT1YOR048C RPL8AP17076 256 aaKnown RBP5.72□□□□□ -1.49
RAT1YOR048C YIL055CP40523 627 aaKnown RBP5.72□□□□□ -1.49
RAT1YOR048C MAD1P40957 749 aa5.72□□□□□ -1.49
RAT1YOR048C CMS1Q07897 291 aaKnown RBP5.72□□□□□ -1.49
RAT1YOR048C NKP1Q12493 238 aa5.72□□□□□ -1.49
RAT1YOR048C YDR461C-AQ2V2P7 80 aa5.72□□□□□ -1.49
RAT1YOR048C PUF4P25339 888 aaKnown RBP RIP-Chip data5.71□□□□□ -1.5not detected
RAT1YOR048C GYP6P32806 458 aa5.71□□□□□ -1.5
RAT1YOR048C RRN3P36070 627 aa5.71□□□□□ -1.5
RAT1YOR048C NCL1P38205 684 aaKnown RBP5.71□□□□□ -1.5
RAT1YOR048C RRT2P38332 387 aa5.71□□□□□ -1.5
RAT1YOR048C APL6P46682 809 aa5.71□□□□□ -1.5
RAT1YOR048C ARK1P53974 638 aa5.71□□□□□ -1.5
RAT1YOR048C VTC3Q02725 835 aa5.71□□□□□ -1.5
RAT1YOR048C DUS4Q06063 367 aa5.71□□□□□ -1.5
RAT1YOR048C LCB5Q06147 687 aaKnown RBP5.71□□□□□ -1.5
RAT1YOR048C DAS2Q12084 232 aa5.71□□□□□ -1.5
RAT1YOR048C GAP1P19145 602 aaPredicted RBP5.71□□□□□ -1.5
RAT1YOR048C ICL1P28240 557 aaPredicted RBP5.71□□□□□ -1.5
RAT1YOR048C PAM1P37304 830 aaKnown RBP5.71□□□□□ -1.5
RAT1YOR048C OAF1P39720 1047 aaPredicted RBP5.71□□□□□ -1.5
RAT1YOR048C ALY2P47029 1046 aa5.71□□□□□ -1.5
RAT1YOR048C SND1Q04007 877 aa5.71□□□□□ -1.5
RAT1YOR048C YDL124WQ07551 312 aaKnown RBP5.71□□□□□ -1.5
RAT1YOR048C YAH1Q12184 172 aaKnown RBP5.71□□□□□ -1.5
RAT1YOR048C FOB1O13329 566 aa5.7□□□□□ -1.5
RAT1YOR048C YLR462WO13556 202 aa5.7□□□□□ -1.5
RAT1YOR048C GAL11P19659 1081 aa5.7□□□□□ -1.5
RAT1YOR048C IME1P21190 360 aa5.7□□□□□ -1.5
RAT1YOR048C SRM1P21827 482 aa5.7□□□□□ -1.5
RAT1YOR048C AFG2P32794 780 aa5.7□□□□□ -1.5
RAT1YOR048C YKU70P32807 602 aa5.7□□□□□ -1.5
RAT1YOR048C YME2P32843 850 aa5.7□□□□□ -1.5
RAT1YOR048C NPL4P33755 580 aa5.7□□□□□ -1.5
RAT1YOR048C YHL049CP38722 271 aa5.7□□□□□ -1.5
RAT1YOR048C YEL075CP39972 122 aa5.7□□□□□ -1.5
RAT1YOR048C YER189WP40104 122 aa5.7□□□□□ -1.5
RAT1YOR048C YFL064CP43540 174 aa5.7□□□□□ -1.5
RAT1YOR048C GIR2Q03768 265 aaPredicted RBP5.7□□□□□ -1.5
RAT1YOR048C YBL111CQ3E7Y5 667 aa5.7□□□□□ -1.5
RAT1YOR048C CMD1P06787 147 aaKnown RBP5.7□□□□□ -1.5
RAT1YOR048C VMA4P22203 233 aaKnown RBP5.7□□□□□ -1.5
RAT1YOR048C PRE8P23639 250 aa5.7□□□□□ -1.5
RAT1YOR048C EFB1P32471 206 aaKnown RBP5.7□□□□□ -1.5
RAT1YOR048C NFU1P32860 256 aa5.7□□□□□ -1.5
RAT1YOR048C BCH2P36122 765 aa5.7□□□□□ -1.5
RAT1YOR048C STV1P37296 890 aa5.7□□□□□ -1.5
RAT1YOR048C YSW1P38280 609 aa5.7□□□□□ -1.5
RAT1YOR048C HIS2P38635 335 aa5.7□□□□□ -1.5
RAT1YOR048C SSP1P38871 571 aa5.7□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 117.4 ms