RNA–Protein interactions for RNA: YKL110C

KTI12, Transcript of Protein that plays a role in modification of tRNA wobble nucleosides, yeast

Gene KTI12, Length 942 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KTI12	YKL110C	ICL1	P28240	557 aa	Predicted RBP	5.78	□□□□□ -1.48
KTI12	YKL110C	PRO3	P32263	286 aa	Known RBP	5.78	□□□□□ -1.48
KTI12	YKL110C	SRP40	P32583	406 aa	Predicted RBP	5.78	□□□□□ -1.48
KTI12	YKL110C	GEF1	P37020	779 aa		5.78	□□□□□ -1.48
KTI12	YKL110C	SEA4	P38164	1038 aa		5.78	□□□□□ -1.48
KTI12	YKL110C	BIM1	P40013	344 aa		5.78	□□□□□ -1.48
KTI12	YKL110C	FYV10	P40492	516 aa		5.78	□□□□□ -1.48
KTI12	YKL110C	FLO1	P32768	1537 aa		5.78	□□□□□ -1.48
KTI12	YKL110C	GSC2	P40989	1895 aa		5.77	□□□□□ -1.49
KTI12	YKL110C	ATE1	P16639	503 aa		5.77	□□□□□ -1.49
KTI12	YKL110C	MSB1	P21339	1137 aa	Known RBP	5.77	□□□□□ -1.49
KTI12	YKL110C	CBP3	P21560	335 aa		5.77	□□□□□ -1.49
KTI12	YKL110C	SEG2	P34250	1132 aa		5.77	□□□□□ -1.49
KTI12	YKL110C	BMH2	P34730	273 aa	Known RBP	5.77	□□□□□ -1.49
KTI12	YKL110C	RFT1	P38206	574 aa	Predicted RBP	5.77	□□□□□ -1.49
KTI12	YKL110C	BSD2	P38356	321 aa		5.77	□□□□□ -1.49
KTI12	YKL110C	YER130C	P39959	443 aa		5.77	□□□□□ -1.49
KTI12	YKL110C	VID27	P40157	782 aa		5.77	□□□□□ -1.49
KTI12	YKL110C	PCI8	P40512	444 aa		5.77	□□□□□ -1.49
KTI12	YKL110C	YPT11	P48559	417 aa		5.77	□□□□□ -1.49
KTI12	YKL110C	CTR9	P89105	1077 aa		5.77	□□□□□ -1.49
KTI12	YKL110C	PRP42	Q03776	544 aa	Known RBP	5.77	□□□□□ -1.49
KTI12	YKL110C	SGD1	Q06132	899 aa		5.77	□□□□□ -1.49
KTI12	YKL110C	RSC2	Q06488	889 aa		5.77	□□□□□ -1.49
KTI12	YKL110C	RAD61	Q99359	647 aa		5.77	□□□□□ -1.49
KTI12	YKL110C	PGI1	P12709	554 aa	Known RBP	5.76	□□□□□ -1.49
KTI12	YKL110C	MAK31	P23059	88 aa		5.76	□□□□□ -1.49
KTI12	YKL110C	RIT1	P23796	513 aa		5.76	□□□□□ -1.49
KTI12	YKL110C	RPS7A	P26786	190 aa	Known RBP	5.76	□□□□□ -1.49
KTI12	YKL110C	URA1	P28272	314 aa	Predicted RBP	5.76	□□□□□ -1.49
KTI12	YKL110C	YKU70	P32807	602 aa		5.76	□□□□□ -1.49
KTI12	YKL110C	LRG1	P35688	1017 aa		5.76	□□□□□ -1.49
KTI12	YKL110C	YKL222C	P35995	705 aa		5.76	□□□□□ -1.49
KTI12	YKL110C	PIP2	P52960	996 aa		5.76	□□□□□ -1.49
KTI12	YKL110C	ROM1	P53046	1155 aa		5.76	□□□□□ -1.49
KTI12	YKL110C	UBX2	Q04228	584 aa		5.76	□□□□□ -1.49
KTI12	YKL110C	MYO5	Q04439	1219 aa	Known RBP	5.76	□□□□□ -1.49
KTI12	YKL110C	MRD1	Q06106	887 aa	Known RBP	5.76	□□□□□ -1.49
KTI12	YKL110C	YOR111W	Q99210	232 aa		5.76	□□□□□ -1.49
KTI12	YKL110C	FLO11	P08640	1367 aa		5.76	□□□□□ -1.49
KTI12	YKL110C	HXK1	P04806	485 aa	Known RBP	5.75	□□□□□ -1.49
KTI12	YKL110C	MET6	P05694	767 aa	Known RBP	5.75	□□□□□ -1.49
KTI12	YKL110C	ACE2	P21192	770 aa		5.75	□□□□□ -1.49
KTI12	YKL110C	GSY2	P27472	705 aa		5.75	□□□□□ -1.49
KTI12	YKL110C	MPE1	P35728	441 aa	Known RBP	5.75	□□□□□ -1.49
KTI12	YKL110C	MIC60	P36112	540 aa		5.75	□□□□□ -1.49
KTI12	YKL110C	NIT1	P40447	199 aa		5.75	□□□□□ -1.49
KTI12	YKL110C	MSH4	P40965	878 aa	Predicted RBP	5.75	□□□□□ -1.49
KTI12	YKL110C	PPT1	P53043	513 aa		5.75	□□□□□ -1.49
KTI12	YKL110C	SDH1	Q00711	640 aa		5.75	□□□□□ -1.49
KTI12	YKL110C	ETT1	Q08421	412 aa	Known RBP	5.75	□□□□□ -1.49
KTI12	YKL110C	YPL260W	Q08977	551 aa		5.75	□□□□□ -1.49
KTI12	YKL110C	PSF3	Q12146	194 aa		5.75	□□□□□ -1.49
KTI12	YKL110C	PTC5	Q12511	572 aa		5.75	□□□□□ -1.49
KTI12	YKL110C	CTT1	P06115	562 aa		5.74	□□□□□ -1.49
KTI12	YKL110C	STI1	P15705	589 aa	Known RBP RIP-Chip data	5.74	□□□□□ -1.49	not detected
KTI12	YKL110C	VMA3	P25515	160 aa		5.74	□□□□□ -1.49
KTI12	YKL110C	SIS2	P36024	562 aa		5.74	□□□□□ -1.49
KTI12	YKL110C	MRPL10	P36520	322 aa		5.74	□□□□□ -1.49
KTI12	YKL110C	MAL31	P38156	614 aa		5.74	□□□□□ -1.49
KTI12	YKL110C	GIP1	P38229	639 aa		5.74	□□□□□ -1.49
KTI12	YKL110C	RXT2	P38255	430 aa		5.74	□□□□□ -1.49
KTI12	YKL110C	PAN5	P38787	379 aa		5.74	□□□□□ -1.49
KTI12	YKL110C	DYS1	P38791	387 aa		5.74	□□□□□ -1.49
KTI12	YKL110C	RPL34B	P40525	121 aa	Known RBP	5.74	□□□□□ -1.49
KTI12	YKL110C	KEL3	Q08979	651 aa	Predicted RBP	5.74	□□□□□ -1.49
KTI12	YKL110C	GET3	Q12154	354 aa	Known RBP	5.74	□□□□□ -1.49
KTI12	YKL110C	GRX6	Q12438	231 aa		5.74	□□□□□ -1.49
KTI12	YKL110C	TAF13	P11747	167 aa		5.73	□□□□□ -1.49
KTI12	YKL110C	SRP54	P20424	541 aa	Known RBP	5.73	□□□□□ -1.49
KTI12	YKL110C	AFG2	P32794	780 aa		5.73	□□□□□ -1.49
KTI12	YKL110C	PSY4	P38193	441 aa		5.73	□□□□□ -1.49
KTI12	YKL110C	RPT6	Q01939	405 aa	Known RBP	5.73	□□□□□ -1.49
KTI12	YKL110C	TIM50	Q02776	476 aa		5.73	□□□□□ -1.49
KTI12	YKL110C	EIS1	Q05050	843 aa	Known RBP	5.73	□□□□□ -1.49
KTI12	YKL110C	MYO1	P08964	1928 aa		5.72	□□□□□ -1.49
KTI12	YKL110C	SES1	P07284	462 aa	Known RBP	5.72	□□□□□ -1.49
KTI12	YKL110C	MRPL33	P20084	86 aa		5.72	□□□□□ -1.49
KTI12	YKL110C	RNR3	P21672	869 aa	Known RBP	5.72	□□□□□ -1.49
KTI12	YKL110C	YKT6	P36015	200 aa	Known RBP	5.72	□□□□□ -1.49
KTI12	YKL110C	NOC2	P39744	710 aa	Known RBP	5.72	□□□□□ -1.49
KTI12	YKL110C	LYS14	P40971	790 aa		5.72	□□□□□ -1.49
KTI12	YKL110C	MTC3	P53077	123 aa		5.72	□□□□□ -1.49
KTI12	YKL110C	YGL138C	P53122	345 aa		5.72	□□□□□ -1.49
KTI12	YKL110C	DSE3	Q08729	430 aa		5.72	□□□□□ -1.49
KTI12	YKL110C	RRG1	Q12167	365 aa	Predicted RBP	5.72	□□□□□ -1.49
KTI12	YKL110C	TOP1	P04786	769 aa		5.71	□□□□□ -1.5
KTI12	YKL110C	CYC8	P14922	966 aa		5.71	□□□□□ -1.5
KTI12	YKL110C	VAN1	P23642	535 aa		5.71	□□□□□ -1.5
KTI12	YKL110C	CHS3	P29465	1165 aa		5.71	□□□□□ -1.5
KTI12	YKL110C	VPS8	P39702	1274 aa		5.71	□□□□□ -1.5
KTI12	YKL110C	ALG2	P43636	503 aa		5.71	□□□□□ -1.5
KTI12	YKL110C	ECL1	P48235	211 aa		5.71	□□□□□ -1.5
KTI12	YKL110C	CUE3	P53137	624 aa	Known RBP	5.71	□□□□□ -1.5
KTI12	YKL110C	GDE1	Q02979	1223 aa		5.71	□□□□□ -1.5
KTI12	YKL110C	WAR1	Q03631	944 aa		5.71	□□□□□ -1.5
KTI12	YKL110C	YDR341C	Q05506	607 aa	Known RBP	5.71	□□□□□ -1.5
KTI12	YKL110C	NUC1	P08466	329 aa		5.7	□□□□□ -1.5
KTI12	YKL110C	PRE8	P23639	250 aa		5.7	□□□□□ -1.5
KTI12	YKL110C	MCM3	P24279	971 aa	Known RBP	5.7	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 34.8 ms