RNA–Protein interactions for RNA: YKL010C

UFD4, Transcript of Ubiquitin-protein ligase (E3), yeastyeast

Gene UFD4, Length 4,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD4YKL010C CAP1P28495 268 aaKnown RBP2.38□□□□□ -2.03
UFD4YKL010C GAA1P39012 614 aa2.38□□□□□ -2.03
UFD4YKL010C AAD14P42884 376 aa2.38□□□□□ -2.03
UFD4YKL010C NCS2P53923 493 aaPredicted RBP2.38□□□□□ -2.03
UFD4YKL010C YAP7Q08182 245 aa2.38□□□□□ -2.03
UFD4YKL010C FAL1Q12099 399 aaKnown RBP2.38□□□□□ -2.03
UFD4YKL010C RPS3P05750 240 aaKnown RBP2.38□□□□□ -2.03
UFD4YKL010C THR4P16120 514 aaKnown RBP2.38□□□□□ -2.03
UFD4YKL010C MTC3P53077 123 aa2.38□□□□□ -2.03
UFD4YKL010C YNL058CP53947 316 aa2.38□□□□□ -2.03
UFD4YKL010C KIN4Q01919 800 aa2.38□□□□□ -2.03
UFD4YKL010C MFM1Q02783 413 aa2.38□□□□□ -2.03
UFD4YKL010C PKH1Q03407 766 aa2.38□□□□□ -2.03
UFD4YKL010C YDR341CQ05506 607 aaKnown RBP2.38□□□□□ -2.03
UFD4YKL010C RLP24Q07915 199 aaKnown RBP2.38□□□□□ -2.03
UFD4YKL010C SFI1Q12369 946 aa2.38□□□□□ -2.03
UFD4YKL010C ADE3P07245 946 aaKnown RBP2.37□□□□□ -2.03
UFD4YKL010C SES1P07284 462 aaKnown RBP2.37□□□□□ -2.03
UFD4YKL010C PRE8P23639 250 aa2.37□□□□□ -2.03
UFD4YKL010C SER1P33330 395 aaKnown RBP2.37□□□□□ -2.03
UFD4YKL010C MNR2P35724 969 aa2.37□□□□□ -2.03
UFD4YKL010C PCH2P38126 564 aa2.37□□□□□ -2.03
UFD4YKL010C YSW1P38280 609 aa2.37□□□□□ -2.03
UFD4YKL010C SET5P38890 526 aaKnown RBP2.37□□□□□ -2.03
UFD4YKL010C VID27P40157 782 aa2.37□□□□□ -2.03
UFD4YKL010C HXT8P40886 569 aa2.37□□□□□ -2.03
UFD4YKL010C TAD1P53065 400 aa2.37□□□□□ -2.03
UFD4YKL010C RPT4P53549 437 aaKnown RBP2.37□□□□□ -2.03
UFD4YKL010C YKL068W-AQ3E826 78 aa2.37□□□□□ -2.03
UFD4YKL010C KTR2P33550 425 aa2.37□□□□□ -2.03
UFD4YKL010C VID30P53076 958 aa2.37□□□□□ -2.03
UFD4YKL010C VIP1Q06685 1146 aaKnown RBP2.37□□□□□ -2.03
UFD4YKL010C ABP140Q08641 628 aaKnown RBP2.37□□□□□ -2.03
UFD4YKL010C PCK1P10963 549 aa2.37□□□□□ -2.03
UFD4YKL010C APL1P27351 700 aa2.37□□□□□ -2.03
UFD4YKL010C YKL222CP35995 705 aa2.37□□□□□ -2.03
UFD4YKL010C VTI1Q04338 217 aa2.37□□□□□ -2.03
UFD4YKL010C DON1Q05610 365 aa2.37□□□□□ -2.03
UFD4YKL010C STE23Q06010 1027 aa2.37□□□□□ -2.03
UFD4YKL010C RIX7Q07844 837 aaKnown RBP2.37□□□□□ -2.03
UFD4YKL010C CIR2Q08822 631 aa2.37□□□□□ -2.03
UFD4YKL010C RRI2Q12348 645 aa2.37□□□□□ -2.03
UFD4YKL010C RPB2P08518 1224 aaKnown RBP2.36□□□□□ -2.03
UFD4YKL010C GFA1P14742 717 aaKnown RBP2.36□□□□□ -2.03
UFD4YKL010C PPX1P38698 397 aa2.36□□□□□ -2.03
UFD4YKL010C FOL1P53848 824 aa2.36□□□□□ -2.03
UFD4YKL010C ALD6P54115 500 aaKnown RBP2.36□□□□□ -2.03
UFD4YKL010C VPS72Q03388 795 aa2.36□□□□□ -2.03
UFD4YKL010C OYE2Q03558 400 aaKnown RBP2.36□□□□□ -2.03
UFD4YKL010C BUL2Q03758 920 aaKnown RBP2.36□□□□□ -2.03
UFD4YKL010C PRP42Q03776 544 aaKnown RBP2.36□□□□□ -2.03
UFD4YKL010C YPR084WQ06821 456 aa2.36□□□□□ -2.03
UFD4YKL010C YPL260WQ08977 551 aa2.36□□□□□ -2.03
UFD4YKL010C SRF1Q12516 437 aa2.36□□□□□ -2.03
UFD4YKL010C YML002WP0CF17 737 aa2.36□□□□□ -2.03
UFD4YKL010C ERG11P10614 530 aa2.36□□□□□ -2.03
UFD4YKL010C RGP1P16664 663 aa2.36□□□□□ -2.03
UFD4YKL010C SPO12P17123 173 aa2.36□□□□□ -2.03
UFD4YKL010C UBP1P25037 809 aa2.36□□□□□ -2.03
UFD4YKL010C CDC60P26637 1090 aaKnown RBP2.36□□□□□ -2.03
UFD4YKL010C SEC21P32074 935 aaKnown RBP2.36□□□□□ -2.03
UFD4YKL010C STO1P34160 861 aaKnown RBP2.36□□□□□ -2.03
UFD4YKL010C BYE1P36106 594 aa2.36□□□□□ -2.03
UFD4YKL010C BIM1P40013 344 aa2.36□□□□□ -2.03
UFD4YKL010C SEC9P40357 651 aa2.36□□□□□ -2.03
UFD4YKL010C YIR042CP40586 236 aa2.36□□□□□ -2.03
UFD4YKL010C MAD1P40957 749 aa2.36□□□□□ -2.03
UFD4YKL010C YJR079WP47126 109 aa2.36□□□□□ -2.03
UFD4YKL010C UBA2P52488 636 aa2.36□□□□□ -2.03
UFD4YKL010C SCW11P53189 542 aa2.36□□□□□ -2.03
UFD4YKL010C YGR021WP53212 290 aa2.36□□□□□ -2.03
UFD4YKL010C LSC2P53312 427 aa2.36□□□□□ -2.03
UFD4YKL010C CAF120P53836 1060 aa2.36□□□□□ -2.03
UFD4YKL010C ARP5P53946 755 aa2.36□□□□□ -2.03
UFD4YKL010C TYW1Q08960 810 aaKnown RBP2.36□□□□□ -2.03
UFD4YKL010C GIS3Q12418 502 aa2.36□□□□□ -2.03
UFD4YKL010C TRP2P00899 507 aaKnown RBP2.36□□□□□ -2.03
UFD4YKL010C SSB1P11484 613 aaKnown RBP2.36□□□□□ -2.03
UFD4YKL010C SFL1P20134 766 aa2.36□□□□□ -2.03
UFD4YKL010C HCA4P20448 770 aaKnown RBP2.36□□□□□ -2.03
UFD4YKL010C RET1P22276 1149 aaKnown RBP2.36□□□□□ -2.03
UFD4YKL010C RIT1P23796 513 aa2.36□□□□□ -2.03
UFD4YKL010C YCR051WP25631 222 aa2.36□□□□□ -2.03
UFD4YKL010C IMP2'P32351 346 aa2.36□□□□□ -2.03
UFD4YKL010C TGL1P34163 548 aa2.36□□□□□ -2.03
UFD4YKL010C SSB2P40150 613 aaKnown RBP2.36□□□□□ -2.03
UFD4YKL010C YJR098CP47139 656 aa2.36□□□□□ -2.03
UFD4YKL010C APT1P49435 187 aaKnown RBP2.36□□□□□ -2.03
UFD4YKL010C PIP2P52960 996 aa2.36□□□□□ -2.03
UFD4YKL010C SOL4P53315 255 aa2.36□□□□□ -2.03
UFD4YKL010C TDA9Q04545 1251 aa2.36□□□□□ -2.03
UFD4YKL010C ECI1Q05871 280 aa2.36□□□□□ -2.03
UFD4YKL010C MAG2Q06436 670 aaKnown RBP2.36□□□□□ -2.03
UFD4YKL010C YDL057WQ07379 328 aa2.36□□□□□ -2.03
UFD4YKL010C YOR223WQ12015 292 aa2.36□□□□□ -2.03
UFD4YKL010C OSH2Q12451 1283 aa2.36□□□□□ -2.03
UFD4YKL010C HSP82P02829 709 aaKnown RBP2.36□□□□□ -2.03
UFD4YKL010C ATG3P40344 310 aa2.36□□□□□ -2.03
UFD4YKL010C YIR007WP40566 764 aa2.36□□□□□ -2.03
UFD4YKL010C GPD2P41911 440 aaKnown RBP2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms