RNA–Protein interactions for RNA: YJL143W

TIM17, Transcript of Essential component of the TIM23 complex, yeast

Gene TIM17, Length 477 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIM17	YJL143W	YDL057W	Q07379	328 aa		11.5	□□□□□ -0.57
TIM17	YJL143W	AFT2	Q08957	416 aa		11.5	□□□□□ -0.57
TIM17	YJL143W	MAK16	P10962	306 aa	Predicted RBP	11.49	□□□□□ -0.57
TIM17	YJL143W	MRF1	P30775	413 aa	Predicted RBP	11.49	□□□□□ -0.57
TIM17	YJL143W	YKL091C	P33324	310 aa	Known RBP	11.49	□□□□□ -0.57
TIM17	YJL143W	HUL4	P40985	892 aa		11.49	□□□□□ -0.57
TIM17	YJL143W	RSC1	P53236	928 aa		11.49	□□□□□ -0.57
TIM17	YJL143W	TCO89	Q08921	799 aa		11.49	□□□□□ -0.57
TIM17	YJL143W	OSW2	Q12202	724 aa		11.49	□□□□□ -0.57
TIM17	YJL143W	PHO8	P11491	566 aa		11.48	□□□□□ -0.57
TIM17	YJL143W	KNS1	P32350	737 aa	Predicted RBP	11.48	□□□□□ -0.57
TIM17	YJL143W	MRPL10	P36520	322 aa		11.48	□□□□□ -0.57
TIM17	YJL143W	TFG2	P41896	400 aa	Predicted RBP	11.48	□□□□□ -0.57
TIM17	YJL143W	JJJ3	P47138	172 aa		11.48	□□□□□ -0.57
TIM17	YJL143W	ARK1	P53974	638 aa		11.48	□□□□□ -0.57
TIM17	YJL143W	FMP30	Q02883	468 aa		11.48	□□□□□ -0.57
TIM17	YJL143W	LCD1	Q04377	747 aa		11.48	□□□□□ -0.57
TIM17	YJL143W	ECM30	Q06673	1274 aa		11.48	□□□□□ -0.57
TIM17	YJL143W	MED1	Q12321	566 aa		11.48	□□□□□ -0.57
TIM17	YJL143W	HEM1	P09950	548 aa	Predicted RBP	11.47	□□□□□ -0.57
TIM17	YJL143W	CLC1	P17891	233 aa		11.47	□□□□□ -0.57
TIM17	YJL143W	MSS51	P32335	436 aa		11.47	□□□□□ -0.57
TIM17	YJL143W	DUR3	P33413	735 aa		11.47	□□□□□ -0.57
TIM17	YJL143W	BIM1	P40013	344 aa		11.47	□□□□□ -0.57
TIM17	YJL143W	AVT1	P47082	602 aa		11.47	□□□□□ -0.57
TIM17	YJL143W	YGR237C	P50089	785 aa		11.47	□□□□□ -0.57
TIM17	YJL143W	NBP1	P52919	319 aa	Predicted RBP	11.47	□□□□□ -0.57
TIM17	YJL143W	RTT102	P53330	157 aa		11.47	□□□□□ -0.57
TIM17	YJL143W	CUS1	Q02554	436 aa	Predicted RBP	11.47	□□□□□ -0.57
TIM17	YJL143W	NCR1	Q12200	1170 aa		11.47	□□□□□ -0.57
TIM17	YJL143W	CDC37	P06101	506 aa	Known RBP	11.46	□□□□□ -0.57
TIM17	YJL143W	ALD5	P40047	520 aa	Known RBP	11.46	□□□□□ -0.57
TIM17	YJL143W	TOS3	P43637	560 aa		11.46	□□□□□ -0.57
TIM17	YJL143W	ACF4	P47129	309 aa		11.46	□□□□□ -0.57
TIM17	YJL143W	CCM1	P48237	864 aa	Predicted RBP	11.46	□□□□□ -0.57
TIM17	YJL143W	VPS72	Q03388	795 aa		11.46	□□□□□ -0.57
TIM17	YJL143W	PSO2	P30620	661 aa		11.45	□□□□□ -0.58
TIM17	YJL143W	DPH2	P32461	534 aa		11.45	□□□□□ -0.58
TIM17	YJL143W	YFL040W	P43562	540 aa		11.45	□□□□□ -0.58
TIM17	YJL143W	SHE10	P53075	577 aa		11.45	□□□□□ -0.58
TIM17	YJL143W	LSC2	P53312	427 aa		11.45	□□□□□ -0.58
TIM17	YJL143W	COG4	Q06096	861 aa		11.45	□□□□□ -0.58
TIM17	YJL143W	IES4	Q08561	116 aa		11.45	□□□□□ -0.58
TIM17	YJL143W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	11.44	□□□□□ -0.58	not detected
TIM17	YJL143W	MRC1	P25588	1096 aa		11.44	□□□□□ -0.58
TIM17	YJL143W	BUD2	P33314	1104 aa		11.44	□□□□□ -0.58
TIM17	YJL143W	MNN4	P36044	1178 aa		11.44	□□□□□ -0.58
TIM17	YJL143W	PAM1	P37304	830 aa	Known RBP	11.44	□□□□□ -0.58
TIM17	YJL143W	AIP1	P46680	615 aa	Known RBP	11.44	□□□□□ -0.58
TIM17	YJL143W	AZR1	P50080	613 aa		11.44	□□□□□ -0.58
TIM17	YJL143W	TAM41	P53230	385 aa		11.44	□□□□□ -0.58
TIM17	YJL143W	EBS1	Q03466	884 aa	Known RBP	11.44	□□□□□ -0.58
TIM17	YJL143W	YPL216W	Q08964	1102 aa		11.44	□□□□□ -0.58
TIM17	YJL143W	WHI2	P12611	486 aa		11.43	□□□□□ -0.58
TIM17	YJL143W	DAL7	P21826	554 aa		11.43	□□□□□ -0.58
TIM17	YJL143W	NAM7	P30771	971 aa	Known RBP	11.43	□□□□□ -0.58
TIM17	YJL143W	KTR2	P33550	425 aa		11.43	□□□□□ -0.58
TIM17	YJL143W	ERC1	P38767	581 aa		11.43	□□□□□ -0.58
TIM17	YJL143W	CUL3	P53202	744 aa		11.43	□□□□□ -0.58
TIM17	YJL143W	YNL146W	P53906	100 aa		11.43	□□□□□ -0.58
TIM17	YJL143W	VTC3	Q02725	835 aa		11.43	□□□□□ -0.58
TIM17	YJL143W	YPL034W	Q03083	165 aa		11.43	□□□□□ -0.58
TIM17	YJL143W	TRK2	P28584	889 aa		11.42	□□□□□ -0.58
TIM17	YJL143W	YEL1	P34225	687 aa		11.42	□□□□□ -0.58
TIM17	YJL143W	AVT3	P36062	692 aa		11.42	□□□□□ -0.58
TIM17	YJL143W	SSL2	Q00578	843 aa		11.42	□□□□□ -0.58
TIM17	YJL143W	WAR1	Q03631	944 aa		11.42	□□□□□ -0.58
TIM17	YJL143W	YAP7	Q08182	245 aa		11.42	□□□□□ -0.58
TIM17	YJL143W	TMT1	P32643	299 aa		11.41	□□□□□ -0.58
TIM17	YJL143W	SKG6	P32900	734 aa	Predicted RBP	11.41	□□□□□ -0.58
TIM17	YJL143W	MIC60	P36112	540 aa		11.41	□□□□□ -0.58
TIM17	YJL143W	SAP190	P36123	1033 aa		11.41	□□□□□ -0.58
TIM17	YJL143W	DON1	Q05610	365 aa		11.41	□□□□□ -0.58
TIM17	YJL143W	ECM7	Q06200	448 aa		11.41	□□□□□ -0.58
TIM17	YJL143W	PIB1	Q06651	286 aa		11.41	□□□□□ -0.58
TIM17	YJL143W	RLP24	Q07915	199 aa	Known RBP	11.41	□□□□□ -0.58
TIM17	YJL143W	YOL075C	Q08234	1294 aa		11.41	□□□□□ -0.58
TIM17	YJL143W	CDC53	Q12018	815 aa	Known RBP	11.41	□□□□□ -0.58
TIM17	YJL143W	VPS13	Q07878	3144 aa		11.4	□□□□□ -0.58
TIM17	YJL143W	SWI6	P09959	803 aa		11.4	□□□□□ -0.58
TIM17	YJL143W	PSY4	P38193	441 aa		11.4	□□□□□ -0.58
TIM17	YJL143W	COS5	P47187	383 aa		11.4	□□□□□ -0.58
TIM17	YJL143W	TMA16	Q08687	178 aa		11.4	□□□□□ -0.58
TIM17	YJL143W	LDB19	Q12502	818 aa		11.4	□□□□□ -0.58
TIM17	YJL143W	YDR524C-B	Q3E6R4	66 aa		11.4	□□□□□ -0.58
TIM17	YJL143W	VMA1	P17255	1071 aa	Known RBP	11.39	□□□□□ -0.59
TIM17	YJL143W	WHI3	P34761	661 aa	Known RBP	11.39	□□□□□ -0.59
TIM17	YJL143W	YET1	P35723	206 aa		11.39	□□□□□ -0.59
TIM17	YJL143W	SGM1	P47166	707 aa		11.39	□□□□□ -0.59
TIM17	YJL143W	GIR2	Q03768	265 aa	Predicted RBP	11.39	□□□□□ -0.59
TIM17	YJL143W	MLH2	Q07980	695 aa		11.39	□□□□□ -0.59
TIM17	YJL143W	TFC8	Q12308	588 aa		11.39	□□□□□ -0.59
TIM17	YJL143W	CHS2	P14180	963 aa		11.38	□□□□□ -0.59
TIM17	YJL143W	FUB1	P25659	250 aa		11.38	□□□□□ -0.59
TIM17	YJL143W	APL1	P27351	700 aa		11.38	□□□□□ -0.59
TIM17	YJL143W	MPE1	P35728	441 aa	Known RBP	11.38	□□□□□ -0.59
TIM17	YJL143W	VID24	P38263	362 aa		11.38	□□□□□ -0.59
TIM17	YJL143W	EFM2	P38347	419 aa		11.38	□□□□□ -0.59
TIM17	YJL143W	CTM1	P38818	585 aa		11.38	□□□□□ -0.59
TIM17	YJL143W	SPT8	P38915	602 aa		11.38	□□□□□ -0.59

Retrieved 100 of 5,963 RNA–protein pairs in 906.9 ms