RNA–Protein interactions for RNA: YGR161C-D

YGR161C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR161C-D, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR161C-DYGR161C-D MRPS18P42847 217 aa2.84□□□□□ -1.96
YGR161C-DYGR161C-D YJL132WP47014 750 aa2.84□□□□□ -1.96
YGR161C-DYGR161C-D UFD2P54860 961 aa2.84□□□□□ -1.96
YGR161C-DYGR161C-D UTP14Q04500 899 aaKnown RBP2.84□□□□□ -1.96
YGR161C-DYGR161C-D HOS1Q12214 470 aa2.84□□□□□ -1.96
YGR161C-DYGR161C-D AI3P03877 415 aa2.83□□□□□ -1.96
YGR161C-DYGR161C-D ATP4P05626 244 aa2.83□□□□□ -1.96
YGR161C-DYGR161C-D RVS161P25343 265 aaKnown RBP2.83□□□□□ -1.96
YGR161C-DYGR161C-D GLY1P37303 387 aaKnown RBP2.83□□□□□ -1.96
YGR161C-DYGR161C-D CDC27P38042 758 aa2.83□□□□□ -1.96
YGR161C-DYGR161C-D RRP3P38712 501 aaKnown RBP2.83□□□□□ -1.96
YGR161C-DYGR161C-D SPT8P38915 602 aa2.83□□□□□ -1.96
YGR161C-DYGR161C-D RGA1P39083 1007 aa2.83□□□□□ -1.96
YGR161C-DYGR161C-D YJR054WP47114 497 aa2.83□□□□□ -1.96
YGR161C-DYGR161C-D EFM3P47163 339 aa2.83□□□□□ -1.96
YGR161C-DYGR161C-D YNR065CP53751 1116 aa2.83□□□□□ -1.96
YGR161C-DYGR161C-D RSC4Q02206 625 aa2.83□□□□□ -1.96
YGR161C-DYGR161C-D IOC4Q04213 475 aa2.83□□□□□ -1.96
YGR161C-DYGR161C-D ARP9Q05123 467 aa2.83□□□□□ -1.96
YGR161C-DYGR161C-D ECI1Q05871 280 aa2.83□□□□□ -1.96
YGR161C-DYGR161C-D EST2Q06163 884 aa2.83□□□□□ -1.96
YGR161C-DYGR161C-D GPI13Q07830 1017 aa2.83□□□□□ -1.96
YGR161C-DYGR161C-D YDR056CQ12025 205 aa2.83□□□□□ -1.96
YGR161C-DYGR161C-D REC8Q12188 680 aa2.83□□□□□ -1.96
YGR161C-DYGR161C-D SFI1Q12369 946 aa2.83□□□□□ -1.96
YGR161C-DYGR161C-D IMP2'P32351 346 aa2.83□□□□□ -1.96
YGR161C-DYGR161C-D RRM3P38766 723 aa2.83□□□□□ -1.96
YGR161C-DYGR161C-D PTI1P39927 425 aaPredicted RBP2.83□□□□□ -1.96
YGR161C-DYGR161C-D IRC4Q03036 179 aa2.83□□□□□ -1.96
YGR161C-DYGR161C-D MTC5Q03897 1148 aa2.83□□□□□ -1.96
YGR161C-DYGR161C-D VID22Q05934 901 aa2.83□□□□□ -1.96
YGR161C-DYGR161C-D YOR223WQ12015 292 aa2.83□□□□□ -1.96
YGR161C-DYGR161C-D SPS1P08458 490 aa2.83□□□□□ -1.96
YGR161C-DYGR161C-D RPL35AP0CX84 120 aaKnown RBP2.83□□□□□ -1.96
YGR161C-DYGR161C-D RPL35BP0CX85 120 aaKnown RBP2.83□□□□□ -1.96
YGR161C-DYGR161C-D PXA2P34230 853 aa2.83□□□□□ -1.96
YGR161C-DYGR161C-D PCA1P38360 1216 aa2.83□□□□□ -1.96
YGR161C-DYGR161C-D THI6P41835 540 aa2.83□□□□□ -1.96
YGR161C-DYGR161C-D DPL1Q05567 589 aa2.83□□□□□ -1.96
YGR161C-DYGR161C-D AAD4Q07747 329 aa2.83□□□□□ -1.96
YGR161C-DYGR161C-D SGF29P25554 259 aa2.83□□□□□ -1.96
YGR161C-DYGR161C-D NTH2P35172 780 aa2.83□□□□□ -1.96
YGR161C-DYGR161C-D PCS60P38137 543 aaKnown RBP RIP-Chip data2.83□□□□□ -1.96not detected
YGR161C-DYGR161C-D GEM1P39722 662 aa2.83□□□□□ -1.96
YGR161C-DYGR161C-D SUR7P54003 302 aa2.83□□□□□ -1.96
YGR161C-DYGR161C-D VPS60Q03390 229 aa2.83□□□□□ -1.96
YGR161C-DYGR161C-D ARG7Q04728 441 aa2.83□□□□□ -1.96
YGR161C-DYGR161C-D YLR455WQ06188 304 aa2.83□□□□□ -1.96
YGR161C-DYGR161C-D YSH1Q06224 779 aaPredicted RBP2.83□□□□□ -1.96
YGR161C-DYGR161C-D SPN1Q06505 410 aaPredicted RBP2.83□□□□□ -1.96
YGR161C-DYGR161C-D ATG23Q06671 453 aa2.83□□□□□ -1.96
YGR161C-DYGR161C-D NDE2Q07500 545 aa2.83□□□□□ -1.96
YGR161C-DYGR161C-D SFG1Q12507 346 aa2.83□□□□□ -1.96
YGR161C-DYGR161C-D GCD1P09032 578 aaPredicted RBP2.82□□□□□ -1.96
YGR161C-DYGR161C-D HSP78P33416 811 aa2.82□□□□□ -1.96
YGR161C-DYGR161C-D PIN4P34217 668 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
YGR161C-DYGR161C-D ORC6P38826 435 aa2.82□□□□□ -1.96
YGR161C-DYGR161C-D AIM23P47015 356 aa2.82□□□□□ -1.96
YGR161C-DYGR161C-D YGR250CP53316 781 aaKnown RBP2.82□□□□□ -1.96
YGR161C-DYGR161C-D HDA3Q06623 655 aa2.82□□□□□ -1.96
YGR161C-DYGR161C-D ADY3Q07732 790 aa2.82□□□□□ -1.96
YGR161C-DYGR161C-D YEH1Q07804 573 aa2.82□□□□□ -1.96
YGR161C-DYGR161C-D NOP58Q12499 511 aaKnown RBP2.82□□□□□ -1.96
YGR161C-DYGR161C-D SRN2Q99176 213 aa2.82□□□□□ -1.96
YGR161C-DYGR161C-D CDC25P04821 1589 aa2.82□□□□□ -1.96
YGR161C-DYGR161C-D HAP4P14064 554 aa2.82□□□□□ -1.96
YGR161C-DYGR161C-D RAD53P22216 821 aa2.82□□□□□ -1.96
YGR161C-DYGR161C-D PPH3P32345 308 aa2.82□□□□□ -1.96
YGR161C-DYGR161C-D SPT16P32558 1035 aaKnown RBP2.82□□□□□ -1.96
YGR161C-DYGR161C-D MRE11P32829 692 aa2.82□□□□□ -1.96
YGR161C-DYGR161C-D SFB3P38810 929 aa2.82□□□□□ -1.96
YGR161C-DYGR161C-D PEX28P38848 579 aa2.82□□□□□ -1.96
YGR161C-DYGR161C-D PRM9P39551 298 aa2.82□□□□□ -1.96
YGR161C-DYGR161C-D MRX1P40050 688 aa2.82□□□□□ -1.96
YGR161C-DYGR161C-D TGL3P40308 642 aa2.82□□□□□ -1.96
YGR161C-DYGR161C-D SUM1P46676 1062 aa2.82□□□□□ -1.96
YGR161C-DYGR161C-D DLD2P46681 530 aaKnown RBP2.82□□□□□ -1.96
YGR161C-DYGR161C-D MET13P53128 600 aa2.82□□□□□ -1.96
YGR161C-DYGR161C-D HOP2P53187 214 aa2.82□□□□□ -1.96
YGR161C-DYGR161C-D DSE4P53753 1117 aa2.82□□□□□ -1.96
YGR161C-DYGR161C-D UBX4P54730 416 aa2.82□□□□□ -1.96
YGR161C-DYGR161C-D MSC2Q03455 724 aa2.82□□□□□ -1.96
YGR161C-DYGR161C-D OYE2Q03558 400 aaKnown RBP2.82□□□□□ -1.96
YGR161C-DYGR161C-D CWC2Q12046 339 aaPredicted RBP2.82□□□□□ -1.96
YGR161C-DYGR161C-D PUS1Q12211 544 aaKnown RBP2.82□□□□□ -1.96
YGR161C-DYGR161C-D POL1P13382 1468 aa2.82□□□□□ -1.96
YGR161C-DYGR161C-D NIP1P32497 812 aaKnown RBP2.82□□□□□ -1.96
YGR161C-DYGR161C-D STB6P36085 766 aa2.82□□□□□ -1.96
YGR161C-DYGR161C-D REV7P38927 245 aa2.82□□□□□ -1.96
YGR161C-DYGR161C-D DAN4P47179 1161 aa2.82□□□□□ -1.96
YGR161C-DYGR161C-D PSP1P50896 841 aaKnown RBP2.82□□□□□ -1.96
YGR161C-DYGR161C-D SUB1P54000 292 aaKnown RBP2.82□□□□□ -1.96
YGR161C-DYGR161C-D STE20Q03497 939 aaKnown RBP2.82□□□□□ -1.96
YGR161C-DYGR161C-D SLX4Q12098 748 aa2.82□□□□□ -1.96
YGR161C-DYGR161C-D SVS1Q12254 260 aa2.82□□□□□ -1.96
YGR161C-DYGR161C-D VCX1Q99385 411 aa2.82□□□□□ -1.96
YGR161C-DYGR161C-D PHR1P05066 565 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
YGR161C-DYGR161C-D ATP1P07251 545 aaKnown RBP2.82□□□□□ -1.96
YGR161C-DYGR161C-D MIS1P09440 975 aaKnown RBP2.82□□□□□ -1.96
YGR161C-DYGR161C-D PEP5P12868 1029 aa2.82□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms