RNA–Protein interactions for RNA: YER087C-B

SBH1, Transcript of Beta subunit of Sec61p ER translocation complex (Sec61p-Sss1p-Sbh1p), yeastyeast

Gene SBH1, Length 249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SBH1YER087C-B RPL11BQ3E757 174 aaPredicted RBP1.62□□□□□ -2.15
SBH1YER087C-B MET3P08536 511 aa1.61□□□□□ -2.15
SBH1YER087C-B HSF1P10961 833 aa1.61□□□□□ -2.15
SBH1YER087C-B SED4P25365 1065 aa1.61□□□□□ -2.15
SBH1YER087C-B ELO3P40319 345 aa1.61□□□□□ -2.15
SBH1YER087C-B MTC3P53077 123 aa1.61□□□□□ -2.15
SBH1YER087C-B ADY4Q05955 493 aa1.61□□□□□ -2.15
SBH1YER087C-B GEP3Q08622 556 aa1.61□□□□□ -2.15
SBH1YER087C-B UPC2Q12151 913 aa1.61□□□□□ -2.15
SBH1YER087C-B SYP1P25623 870 aaKnown RBP1.6□□□□□ -2.15
SBH1YER087C-B SLA2P33338 968 aa1.6□□□□□ -2.15
SBH1YER087C-B CBR1P38626 284 aaKnown RBP1.6□□□□□ -2.15
SBH1YER087C-B PIC2P40035 300 aa1.6□□□□□ -2.15
SBH1YER087C-B YLR149CQ99296 730 aa1.6□□□□□ -2.15
SBH1YER087C-B EMP70P32802 667 aa1.59□□□□□ -2.15
SBH1YER087C-B YPL109CQ02981 657 aa1.59□□□□□ -2.15
SBH1YER087C-B NAB6Q03735 1134 aaKnown RBP RIP-Chip data1.59□□□□□ -2.15not detected
SBH1YER087C-B DLT1Q04216 342 aa1.59□□□□□ -2.15
SBH1YER087C-B PEX19Q07418 342 aa1.59□□□□□ -2.15
SBH1YER087C-B ERG11P10614 530 aa1.58□□□□□ -2.16
SBH1YER087C-B ATG19P35193 415 aa1.58□□□□□ -2.16
SBH1YER087C-B MCM7P38132 845 aa1.58□□□□□ -2.16
SBH1YER087C-B ECM21P38167 1117 aaKnown RBP1.58□□□□□ -2.16
SBH1YER087C-B GEM1P39722 662 aa1.58□□□□□ -2.16
SBH1YER087C-B CNN1P43618 361 aa1.58□□□□□ -2.16
SBH1YER087C-B CAF20P12962 161 aaKnown RBP1.57□□□□□ -2.16
SBH1YER087C-B NUP1P20676 1076 aa1.57□□□□□ -2.16
SBH1YER087C-B DMC1P25453 334 aa1.57□□□□□ -2.16
SBH1YER087C-B YGL176CP46945 554 aa1.57□□□□□ -2.16
SBH1YER087C-B NUT2Q06213 157 aa1.57□□□□□ -2.16
SBH1YER087C-B THS1P04801 734 aaKnown RBP1.56□□□□□ -2.16
SBH1YER087C-B TRL1P09880 827 aaKnown RBP1.56□□□□□ -2.16
SBH1YER087C-B VPS34P22543 875 aa1.56□□□□□ -2.16
SBH1YER087C-B STE14P32584 239 aa1.56□□□□□ -2.16
SBH1YER087C-B FAA3P39002 694 aa1.56□□□□□ -2.16
SBH1YER087C-B OSW1Q08692 278 aa1.56□□□□□ -2.16
SBH1YER087C-B DBP5P20449 482 aaKnown RBP1.55□□□□□ -2.16
SBH1YER087C-B MPH1P40562 993 aa1.55□□□□□ -2.16
SBH1YER087C-B MUP1P50276 574 aa1.55□□□□□ -2.16
SBH1YER087C-B DAM1P53267 343 aa1.55□□□□□ -2.16
SBH1YER087C-B YJL206CP39529 758 aa1.54□□□□□ -2.16
SBH1YER087C-B YEL020CP39994 560 aa1.54□□□□□ -2.16
SBH1YER087C-B FKH2P41813 862 aa1.54□□□□□ -2.16
SBH1YER087C-B SIW14P53965 281 aa1.54□□□□□ -2.16
SBH1YER087C-B SEC21P32074 935 aaKnown RBP1.53□□□□□ -2.16
SBH1YER087C-B CTF13P35203 478 aa1.53□□□□□ -2.16
SBH1YER087C-B SLX1P38324 304 aa1.53□□□□□ -2.16
SBH1YER087C-B MDJ2P42834 146 aa1.53□□□□□ -2.16
SBH1YER087C-B YJL163CP46996 555 aa1.53□□□□□ -2.16
SBH1YER087C-B SPP382Q06411 708 aaPredicted RBP1.53□□□□□ -2.16
SBH1YER087C-B OXR1Q08952 273 aa1.53□□□□□ -2.16
SBH1YER087C-B VPS35P34110 944 aa1.52□□□□□ -2.17
SBH1YER087C-B LTP1P40347 161 aa1.52□□□□□ -2.17
SBH1YER087C-B RIA1P53893 1110 aa1.52□□□□□ -2.17
SBH1YER087C-B GCD6P32501 712 aaKnown RBP1.51□□□□□ -2.17
SBH1YER087C-B SEC8P32855 1065 aa1.51□□□□□ -2.17
SBH1YER087C-B CCT4P39078 528 aaKnown RBP1.51□□□□□ -2.17
SBH1YER087C-B HXT13P39924 564 aa1.51□□□□□ -2.17
SBH1YER087C-B HXT17P53631 564 aa1.51□□□□□ -2.17
SBH1YER087C-B SFB2P53953 876 aa1.51□□□□□ -2.17
SBH1YER087C-B HXT15P54854 567 aa1.51□□□□□ -2.17
SBH1YER087C-B MRL1Q06815 381 aa1.51□□□□□ -2.17
SBH1YER087C-B MDM38Q08179 573 aa1.51□□□□□ -2.17
SBH1YER087C-B NEW1Q08972 1196 aaKnown RBP1.51□□□□□ -2.17
SBH1YER087C-B GNT1Q12096 491 aa1.51□□□□□ -2.17
SBH1YER087C-B YKL151CP36059 337 aa1.5□□□□□ -2.17
SBH1YER087C-B GIC1P38785 314 aa1.5□□□□□ -2.17
SBH1YER087C-B PNT1P38969 423 aa1.5□□□□□ -2.17
SBH1YER087C-B CCT7P42943 550 aaKnown RBP1.5□□□□□ -2.17
SBH1YER087C-B YGR053CP53234 283 aa1.5□□□□□ -2.17
SBH1YER087C-B YPL068CQ02749 293 aa1.5□□□□□ -2.17
SBH1YER087C-B SRT1Q03175 343 aa1.5□□□□□ -2.17
SBH1YER087C-B IRC13Q08630 104 aa1.5□□□□□ -2.17
SBH1YER087C-B PHO4P07270 312 aaKnown RBP1.49□□□□□ -2.17
SBH1YER087C-B TAF13P11747 167 aa1.49□□□□□ -2.17
SBH1YER087C-B HIS7P33734 552 aaKnown RBP1.49□□□□□ -2.17
SBH1YER087C-B ERP5P38819 212 aa1.49□□□□□ -2.17
SBH1YER087C-B MAF1P41910 395 aa1.49□□□□□ -2.17
SBH1YER087C-B SSL2Q00578 843 aa1.49□□□□□ -2.17
SBH1YER087C-B HRQ1Q05549 1077 aa1.49□□□□□ -2.17
SBH1YER087C-B RPN13O13563 156 aa1.48□□□□□ -2.17
SBH1YER087C-B YBR053CP38235 358 aa1.48□□□□□ -2.17
SBH1YER087C-B HRB1P38922 454 aaKnown RBP RIP-Chip data1.48□□□□□ -2.17not detected
SBH1YER087C-B STP1Q00947 519 aa1.48□□□□□ -2.17
SBH1YER087C-B TIF35Q04067 274 aaKnown RBP1.48□□□□□ -2.17
SBH1YER087C-B SSL1Q04673 461 aaPredicted RBP1.48□□□□□ -2.17
SBH1YER087C-B TRM11Q12463 433 aa1.48□□□□□ -2.17
SBH1YER087C-B PGK1P00560 416 aaKnown RBP1.47□□□□□ -2.17
SBH1YER087C-B PRE9P23638 258 aaKnown RBP1.47□□□□□ -2.17
SBH1YER087C-B FUN30P31380 1131 aa1.47□□□□□ -2.17
SBH1YER087C-B RPP1P38786 293 aa1.47□□□□□ -2.17
SBH1YER087C-B NPP2P39997 493 aa1.47□□□□□ -2.17
SBH1YER087C-B RPL34AP87262 121 aaPredicted RBP1.47□□□□□ -2.17
SBH1YER087C-B HXK1P04806 485 aaKnown RBP1.46□□□□□ -2.18
SBH1YER087C-B YPR196WQ06595 470 aa1.46□□□□□ -2.18
SBH1YER087C-B TAF3Q12297 353 aa1.46□□□□□ -2.18
SBH1YER087C-B SWM1Q12379 170 aa1.46□□□□□ -2.18
SBH1YER087C-B TUB3P09734 445 aaKnown RBP1.45□□□□□ -2.18
SBH1YER087C-B MET30P39014 640 aa1.45□□□□□ -2.18
SBH1YER087C-B RAI1P53063 387 aaKnown RBP1.45□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms