RNA–Protein interactions for RNA: YDR143C

SAN1, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene SAN1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SAN1YDR143C XRS2P33301 854 aa9.11□□□□□ -0.95
SAN1YDR143C VPS29P38759 282 aa9.11□□□□□ -0.95
SAN1YDR143C SHQ1P40486 507 aaPredicted RBP9.11□□□□□ -0.95
SAN1YDR143C IES1P43579 692 aa9.11□□□□□ -0.95
SAN1YDR143C APT1P49435 187 aaKnown RBP9.11□□□□□ -0.95
SAN1YDR143C ERG5P54781 538 aa9.11□□□□□ -0.95
SAN1YDR143C PPR1P07272 904 aaPredicted RBP9.1□□□□□ -0.95
SAN1YDR143C HVG1P0CE11 249 aa9.1□□□□□ -0.95
SAN1YDR143C MTF2P10849 440 aa9.1□□□□□ -0.95
SAN1YDR143C TCP1P12612 559 aaKnown RBP9.1□□□□□ -0.95
SAN1YDR143C DBP5P20449 482 aaKnown RBP9.1□□□□□ -0.95
SAN1YDR143C APL1P27351 700 aa9.1□□□□□ -0.95
SAN1YDR143C UBP13P38187 747 aa9.1□□□□□ -0.95
SAN1YDR143C CAF130P53280 1122 aaPredicted RBP9.1□□□□□ -0.95
SAN1YDR143C HOS3Q02959 697 aaKnown RBP9.1□□□□□ -0.95
SAN1YDR143C PDC6P26263 563 aaKnown RBP9.1□□□□□ -0.95
SAN1YDR143C STO1P34160 861 aaKnown RBP9.1□□□□□ -0.95
SAN1YDR143C ASH1P34233 588 aa9.1□□□□□ -0.95
SAN1YDR143C ALF1P53904 254 aa9.1□□□□□ -0.95
SAN1YDR143C YAF9P53930 226 aa9.1□□□□□ -0.95
SAN1YDR143C RBA50Q04418 439 aa9.1□□□□□ -0.95
SAN1YDR143C NOC3Q07896 663 aaPredicted RBP9.1□□□□□ -0.95
SAN1YDR143C FAL1Q12099 399 aaKnown RBP9.1□□□□□ -0.95
SAN1YDR143C PHO8P11491 566 aa9.09□□□□□ -0.95
SAN1YDR143C TUP1P16649 713 aa9.09□□□□□ -0.95
SAN1YDR143C ATG19P35193 415 aa9.09□□□□□ -0.95
SAN1YDR143C DBP7P36120 742 aaKnown RBP9.09□□□□□ -0.95
SAN1YDR143C CAJ1P39101 391 aa9.09□□□□□ -0.95
SAN1YDR143C YAP5P40574 245 aa9.09□□□□□ -0.95
SAN1YDR143C VPS53P47061 822 aa9.09□□□□□ -0.95
SAN1YDR143C AVT1P47082 602 aa9.09□□□□□ -0.95
SAN1YDR143C VID30P53076 958 aa9.09□□□□□ -0.95
SAN1YDR143C GIR2Q03768 265 aaPredicted RBP9.09□□□□□ -0.95
SAN1YDR143C YMR321CQ04898 105 aa9.09□□□□□ -0.95
SAN1YDR143C YSC83P32792 385 aa9.08□□□□□ -0.96
SAN1YDR143C SMC1P32908 1225 aa9.08□□□□□ -0.96
SAN1YDR143C NIP100P33420 868 aa9.08□□□□□ -0.96
SAN1YDR143C YKL023WP36103 277 aaKnown RBP9.08□□□□□ -0.96
SAN1YDR143C BSD2P38356 321 aa9.08□□□□□ -0.96
SAN1YDR143C CCC2P38995 1004 aa9.08□□□□□ -0.96
SAN1YDR143C LCB2P40970 561 aa9.08□□□□□ -0.96
SAN1YDR143C TAD1P53065 400 aa9.08□□□□□ -0.96
SAN1YDR143C MLH2Q07980 695 aa9.08□□□□□ -0.96
SAN1YDR143C PLP2Q12017 286 aa9.08□□□□□ -0.96
SAN1YDR143C DED1P06634 604 aaKnown RBP9.08□□□□□ -0.96
SAN1YDR143C UBC1P21734 215 aaKnown RBP9.08□□□□□ -0.96
SAN1YDR143C TFC4P33339 1025 aa9.08□□□□□ -0.96
SAN1YDR143C TVP38P36164 337 aa9.08□□□□□ -0.96
SAN1YDR143C HMF1P40037 129 aaKnown RBP9.08□□□□□ -0.96
SAN1YDR143C RPS7BP48164 190 aaKnown RBP9.08□□□□□ -0.96
SAN1YDR143C GPI13Q07830 1017 aa9.08□□□□□ -0.96
SAN1YDR143C NEW1Q08972 1196 aaKnown RBP9.08□□□□□ -0.96
SAN1YDR143C MCM16Q12262 181 aa9.08□□□□□ -0.96
SAN1YDR143C TOM70P07213 617 aaKnown RBP9.07□□□□□ -0.96
SAN1YDR143C CHS2P14180 963 aa9.07□□□□□ -0.96
SAN1YDR143C SEC23P15303 768 aaKnown RBP9.07□□□□□ -0.96
SAN1YDR143C RAD57P25301 460 aa9.07□□□□□ -0.96
SAN1YDR143C SEC8P32855 1065 aa9.07□□□□□ -0.96
SAN1YDR143C UTP5Q04177 643 aaKnown RBP9.07□□□□□ -0.96
SAN1YDR143C CUR1Q06469 252 aa9.07□□□□□ -0.96
SAN1YDR143C YLR001CQ07895 862 aa9.07□□□□□ -0.96
SAN1YDR143C MSC6Q08818 692 aaKnown RBP9.07□□□□□ -0.96
SAN1YDR143C YUR1P26725 428 aa9.06□□□□□ -0.96
SAN1YDR143C NAM7P30771 971 aaKnown RBP9.06□□□□□ -0.96
SAN1YDR143C KTR2P33550 425 aa9.06□□□□□ -0.96
SAN1YDR143C APE3P37302 537 aaKnown RBP9.06□□□□□ -0.96
SAN1YDR143C YEL025CP39991 1188 aa9.06□□□□□ -0.96
SAN1YDR143C SCS3P53012 380 aa9.06□□□□□ -0.96
SAN1YDR143C TAM41P53230 385 aa9.06□□□□□ -0.96
SAN1YDR143C ROD1Q02805 837 aa9.06□□□□□ -0.96
SAN1YDR143C YPR078CQ06813 372 aa9.06□□□□□ -0.96
SAN1YDR143C SFI1Q12369 946 aa9.06□□□□□ -0.96
SAN1YDR143C RPL17AP05740 184 aaKnown RBP9.05□□□□□ -0.96
SAN1YDR143C SWI6P09959 803 aa9.05□□□□□ -0.96
SAN1YDR143C SSD1P24276 1250 aaKnown RBP RIP-Chip data9.05□□□□□ -0.96not detected
SAN1YDR143C SMC2P38989 1170 aaKnown RBP9.05□□□□□ -0.96
SAN1YDR143C CEP3P40969 608 aa9.05□□□□□ -0.96
SAN1YDR143C MMM1P41800 426 aa9.05□□□□□ -0.96
SAN1YDR143C RPL17BP46990 184 aaKnown RBP9.05□□□□□ -0.96
SAN1YDR143C TIM8P57744 87 aa9.05□□□□□ -0.96
SAN1YDR143C SMC5Q08204 1093 aa9.05□□□□□ -0.96
SAN1YDR143C JNM1P36224 373 aa9.05□□□□□ -0.96
SAN1YDR143C EFM4P40516 257 aa9.05□□□□□ -0.96
SAN1YDR143C SPR3P41901 512 aa9.05□□□□□ -0.96
SAN1YDR143C VPS60Q03390 229 aa9.05□□□□□ -0.96
SAN1YDR143C YLR297WQ05899 129 aa9.05□□□□□ -0.96
SAN1YDR143C CST9Q06032 482 aa9.05□□□□□ -0.96
SAN1YDR143C YLL058WQ12198 575 aa9.05□□□□□ -0.96
SAN1YDR143C TRM11Q12463 433 aa9.05□□□□□ -0.96
SAN1YDR143C MCX1P38323 520 aaPredicted RBP9.04□□□□□ -0.96
SAN1YDR143C YMR124WP39523 943 aaKnown RBP9.04□□□□□ -0.96
SAN1YDR143C UBP3Q01477 912 aaKnown RBP RIP-Chip data9.04□□□□□ -0.96 RIP-Chip
SAN1YDR143C SML1Q04964 104 aa9.04□□□□□ -0.96
SAN1YDR143C COQ9Q05779 260 aa9.04□□□□□ -0.96
SAN1YDR143C OPY2Q06810 360 aa9.04□□□□□ -0.96
SAN1YDR143C RLP24Q07915 199 aaKnown RBP9.04□□□□□ -0.96
SAN1YDR143C SLX4Q12098 748 aa9.04□□□□□ -0.96
SAN1YDR143C NOP58Q12499 511 aaKnown RBP9.04□□□□□ -0.96
SAN1YDR143C IRE1P32361 1115 aa9.03□□□□□ -0.96
SAN1YDR143C MUD1P32605 298 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 64.8 ms