RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C RPS4BP0CX36 261 aaKnown RBP5.22□□□□□ -1.57
SHU2YDR078C SNF5P18480 905 aa5.22□□□□□ -1.57
SHU2YDR078C RAD53P22216 821 aa5.22□□□□□ -1.57
SHU2YDR078C YKL151CP36059 337 aa5.22□□□□□ -1.57
SHU2YDR078C UGA2P38067 497 aa5.22□□□□□ -1.57
SHU2YDR078C BAP2P38084 609 aa5.22□□□□□ -1.57
SHU2YDR078C DSS1P39112 969 aa5.22□□□□□ -1.57
SHU2YDR078C SAH1P39954 449 aaKnown RBP5.22□□□□□ -1.57
SHU2YDR078C TOK1P40310 691 aa5.22□□□□□ -1.57
SHU2YDR078C YFL054CP43549 646 aa5.22□□□□□ -1.57
SHU2YDR078C HLJ1P48353 224 aa5.22□□□□□ -1.57
SHU2YDR078C YNL193WP53870 558 aa5.22□□□□□ -1.57
SHU2YDR078C COQ4O13525 335 aa5.21□□□□□ -1.58
SHU2YDR078C TSA1P34760 196 aaKnown RBP5.21□□□□□ -1.58
SHU2YDR078C ERT1P38140 529 aa5.21□□□□□ -1.58
SHU2YDR078C MMM1P41800 426 aa5.21□□□□□ -1.58
SHU2YDR078C YJR008WP47085 338 aa5.21□□□□□ -1.58
SHU2YDR078C YLR001CQ07895 862 aa5.21□□□□□ -1.58
SHU2YDR078C YLL058WQ12198 575 aa5.21□□□□□ -1.58
SHU2YDR078C PHR1P05066 565 aaKnown RBP RIP-Chip data5.2□□□□□ -1.58not detected
SHU2YDR078C NPP1P25353 742 aa5.2□□□□□ -1.58
SHU2YDR078C GIP4P39732 760 aa5.2□□□□□ -1.58
SHU2YDR078C SEC26P41810 973 aaKnown RBP5.2□□□□□ -1.58
SHU2YDR078C ATG36P46983 293 aa5.2□□□□□ -1.58
SHU2YDR078C CCM1P48237 864 aaPredicted RBP5.2□□□□□ -1.58
SHU2YDR078C EAR1Q03212 550 aa5.2□□□□□ -1.58
SHU2YDR078C BI4P03879 638 aa5.19□□□□□ -1.58
SHU2YDR078C VBA3P25594 458 aa5.19□□□□□ -1.58
SHU2YDR078C REC104P33323 182 aa5.19□□□□□ -1.58
SHU2YDR078C HSP78P33416 811 aa5.19□□□□□ -1.58
SHU2YDR078C SPC29P33419 253 aa5.19□□□□□ -1.58
SHU2YDR078C YKR078WP36158 585 aaKnown RBP5.19□□□□□ -1.58
SHU2YDR078C PAF1P38351 445 aa5.19□□□□□ -1.58
SHU2YDR078C PIK1P39104 1066 aa5.19□□□□□ -1.58
SHU2YDR078C CIT3P43635 486 aa5.19□□□□□ -1.58
SHU2YDR078C PMT3P47190 753 aa5.19□□□□□ -1.58
SHU2YDR078C YGR237CP50089 785 aa5.19□□□□□ -1.58
SHU2YDR078C MDM38Q08179 573 aa5.19□□□□□ -1.58
SHU2YDR078C CDC9P04819 755 aa5.18□□□□□ -1.58
SHU2YDR078C MRC1P25588 1096 aa5.18□□□□□ -1.58
SHU2YDR078C THI80P35202 319 aa5.18□□□□□ -1.58
SHU2YDR078C CCZ1P38273 704 aa5.18□□□□□ -1.58
SHU2YDR078C TSL1P38427 1098 aaKnown RBP5.18□□□□□ -1.58
SHU2YDR078C GYP7P48365 746 aa5.18□□□□□ -1.58
SHU2YDR078C YGR283CP53336 341 aaPredicted RBP5.18□□□□□ -1.58
SHU2YDR078C THI73Q07904 523 aa5.18□□□□□ -1.58
SHU2YDR078C RCL1Q08096 367 aaPredicted RBP5.18□□□□□ -1.58
SHU2YDR078C SRD1P09007 221 aa5.17□□□□□ -1.58
SHU2YDR078C SAM35P14693 329 aa5.17□□□□□ -1.58
SHU2YDR078C YHL012WP38709 493 aa5.17□□□□□ -1.58
SHU2YDR078C GIC1P38785 314 aa5.17□□□□□ -1.58
SHU2YDR078C YER158CP40095 573 aa5.17□□□□□ -1.58
SHU2YDR078C MGS1P40151 587 aa5.17□□□□□ -1.58
SHU2YDR078C GYP8P43570 497 aa5.17□□□□□ -1.58
SHU2YDR078C RTS3P53289 263 aa5.17□□□□□ -1.58
SHU2YDR078C SDA1P53313 767 aaKnown RBP5.17□□□□□ -1.58
SHU2YDR078C YVC1Q12324 675 aa5.17□□□□□ -1.58
SHU2YDR078C NSI1Q12457 570 aa5.17□□□□□ -1.58
SHU2YDR078C NUP145P49687 1317 aa5.17□□□□□ -1.58
SHU2YDR078C SRO9P25567 434 aaKnown RBP5.16□□□□□ -1.58
SHU2YDR078C MDL2P33311 773 aa5.16□□□□□ -1.58
SHU2YDR078C YEL1P34225 687 aa5.16□□□□□ -1.58
SHU2YDR078C MTC2P34246 357 aa5.16□□□□□ -1.58
SHU2YDR078C EMC3P36039 253 aa5.16□□□□□ -1.58
SHU2YDR078C YBR238CP38330 731 aaKnown RBP5.16□□□□□ -1.58
SHU2YDR078C RRT14P40470 206 aa5.16□□□□□ -1.58
SHU2YDR078C OYE3P41816 400 aaPredicted RBP5.16□□□□□ -1.58
SHU2YDR078C MTC3P53077 123 aa5.16□□□□□ -1.58
SHU2YDR078C DAM1P53267 343 aa5.16□□□□□ -1.58
SHU2YDR078C RCM1P53972 490 aa5.16□□□□□ -1.58
SHU2YDR078C UME1Q03010 460 aa5.16□□□□□ -1.58
SHU2YDR078C ATP25Q03153 612 aa5.16□□□□□ -1.58
SHU2YDR078C ENV7Q12003 364 aa5.16□□□□□ -1.58
SHU2YDR078C CDC48P25694 835 aaKnown RBP5.15□□□□□ -1.59
SHU2YDR078C NPP2P39997 493 aa5.15□□□□□ -1.59
SHU2YDR078C TY4A-JP47023 414 aa5.15□□□□□ -1.59
SHU2YDR078C YKE2P52553 114 aa5.15□□□□□ -1.59
SHU2YDR078C GPG1P53130 126 aa5.15□□□□□ -1.59
SHU2YDR078C SRT1Q03175 343 aa5.15□□□□□ -1.59
SHU2YDR078C MET7Q08645 548 aa5.15□□□□□ -1.59
SHU2YDR078C RAD18P10862 487 aa5.14□□□□□ -1.59
SHU2YDR078C ACE2P21192 770 aa5.14□□□□□ -1.59
SHU2YDR078C PCL2P25693 308 aa5.14□□□□□ -1.59
SHU2YDR078C FUN30P31380 1131 aa5.14□□□□□ -1.59
SHU2YDR078C NIT3P49954 291 aa5.14□□□□□ -1.59
SHU2YDR078C RSC3Q06639 885 aa5.14□□□□□ -1.59
SHU2YDR078C YOR059CQ08448 450 aaKnown RBP5.14□□□□□ -1.59
SHU2YDR078C TMA17Q12513 150 aa5.14□□□□□ -1.59
SHU2YDR078C SSD1P24276 1250 aaKnown RBP RIP-Chip data5.13□□□□□ -1.59not detected
SHU2YDR078C STO1P34160 861 aaKnown RBP5.13□□□□□ -1.59
SHU2YDR078C TYS1P36421 394 aaKnown RBP5.13□□□□□ -1.59
SHU2YDR078C CAF16P43569 289 aa5.13□□□□□ -1.59
SHU2YDR078C MET13P53128 600 aa5.13□□□□□ -1.59
SHU2YDR078C FOL1P53848 824 aa5.13□□□□□ -1.59
SHU2YDR078C RSC58Q07979 502 aa5.13□□□□□ -1.59
SHU2YDR078C NBA1Q08229 501 aaKnown RBP5.13□□□□□ -1.59
SHU2YDR078C FAP7Q12055 197 aaPredicted RBP5.13□□□□□ -1.59
SHU2YDR078C MPH2P0CD99 609 aa5.12□□□□□ -1.59
SHU2YDR078C FLR1P38124 548 aa5.12□□□□□ -1.59
SHU2YDR078C ENP1P38333 483 aaKnown RBP5.12□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms