RNA–Protein interactions for RNA: YDL116W

NUP84, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP84, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP84YDL116W FLO1P32768 1537 aa7.54□□□□□ -1.2
NUP84YDL116W NFU1P32860 256 aa7.53□□□□□ -1.2
NUP84YDL116W OLA1P38219 394 aaKnown RBP7.53□□□□□ -1.2
NUP84YDL116W PIP2P52960 996 aa7.53□□□□□ -1.2
NUP84YDL116W RTC4P53850 401 aa7.53□□□□□ -1.2
NUP84YDL116W MDM1Q01846 1127 aa7.53□□□□□ -1.2
NUP84YDL116W YDL057WQ07379 328 aa7.53□□□□□ -1.2
NUP84YDL116W YPL260WQ08977 551 aa7.53□□□□□ -1.2
NUP84YDL116W CEX1Q12453 761 aa7.53□□□□□ -1.2
NUP84YDL116W RAD61Q99359 647 aa7.53□□□□□ -1.2
NUP84YDL116W RPB2P08518 1224 aaKnown RBP7.53□□□□□ -1.2
NUP84YDL116W YEL076C-AP0CX16 216 aa7.53□□□□□ -1.2
NUP84YDL116W YLR464WP0CX17 216 aa7.53□□□□□ -1.2
NUP84YDL116W SSB1P11484 613 aaKnown RBP7.53□□□□□ -1.2
NUP84YDL116W GAL11P19659 1081 aa7.53□□□□□ -1.2
NUP84YDL116W BAS1P22035 811 aa7.53□□□□□ -1.2
NUP84YDL116W GSY1P23337 708 aa7.53□□□□□ -1.2
NUP84YDL116W GCD6P32501 712 aaKnown RBP7.53□□□□□ -1.2
NUP84YDL116W YEL076CP39971 216 aa7.53□□□□□ -1.2
NUP84YDL116W SSB2P40150 613 aaKnown RBP7.53□□□□□ -1.2
NUP84YDL116W YFH7P43591 353 aa7.53□□□□□ -1.2
NUP84YDL116W PRY3P47033 881 aa7.53□□□□□ -1.2
NUP84YDL116W CBK1P53894 756 aa7.53□□□□□ -1.2
NUP84YDL116W OPY2Q06810 360 aa7.53□□□□□ -1.2
NUP84YDL116W CYB2P00175 591 aa7.52□□□□□ -1.21
NUP84YDL116W POL3P15436 1097 aa7.52□□□□□ -1.21
NUP84YDL116W CHS3P29465 1165 aa7.52□□□□□ -1.21
NUP84YDL116W ASF1P32447 279 aa7.52□□□□□ -1.21
NUP84YDL116W GCG1P32656 232 aaKnown RBP7.52□□□□□ -1.21
NUP84YDL116W YME2P32843 850 aa7.52□□□□□ -1.21
NUP84YDL116W FZO1P38297 855 aa7.52□□□□□ -1.21
NUP84YDL116W SMC2P38989 1170 aaKnown RBP7.52□□□□□ -1.21
NUP84YDL116W MAD1P40957 749 aa7.52□□□□□ -1.21
NUP84YDL116W SET4P42948 560 aa7.52□□□□□ -1.21
NUP84YDL116W VTC2P43585 828 aa7.52□□□□□ -1.21
NUP84YDL116W CPR6P53691 371 aaKnown RBP7.52□□□□□ -1.21
NUP84YDL116W BET4Q00618 327 aa7.52□□□□□ -1.21
NUP84YDL116W TFB2Q02939 513 aa7.52□□□□□ -1.21
NUP84YDL116W VPS30Q02948 557 aa7.52□□□□□ -1.21
NUP84YDL116W ECI1Q05871 280 aa7.52□□□□□ -1.21
NUP84YDL116W HXT1P32465 570 aa7.52□□□□□ -1.21
NUP84YDL116W YSW1P38280 609 aa7.52□□□□□ -1.21
NUP84YDL116W UBP6P43593 499 aaKnown RBP7.52□□□□□ -1.21
NUP84YDL116W KAP114P53067 1004 aa7.52□□□□□ -1.21
NUP84YDL116W RIM8P53179 542 aa7.52□□□□□ -1.21
NUP84YDL116W BNI5P53890 448 aaKnown RBP7.52□□□□□ -1.21
NUP84YDL116W LCB5Q06147 687 aaKnown RBP7.52□□□□□ -1.21
NUP84YDL116W CMS1Q07897 291 aaKnown RBP7.52□□□□□ -1.21
NUP84YDL116W MLH2Q07980 695 aa7.52□□□□□ -1.21
NUP84YDL116W LAM6Q08001 693 aa7.52□□□□□ -1.21
NUP84YDL116W OSW1Q08692 278 aa7.52□□□□□ -1.21
NUP84YDL116W SAM2P19358 384 aaKnown RBP7.51□□□□□ -1.21
NUP84YDL116W YEL1P34225 687 aa7.51□□□□□ -1.21
NUP84YDL116W STN1P38960 494 aa7.51□□□□□ -1.21
NUP84YDL116W ALG2P43636 503 aa7.51□□□□□ -1.21
NUP84YDL116W SUM1P46676 1062 aa7.51□□□□□ -1.21
NUP84YDL116W RPC17P47076 161 aa7.51□□□□□ -1.21
NUP84YDL116W TOF1P53840 1238 aa7.51□□□□□ -1.21
NUP84YDL116W PGA2P53903 129 aa7.51□□□□□ -1.21
NUP84YDL116W FAR11P53917 953 aa7.51□□□□□ -1.21
NUP84YDL116W GIR2Q03768 265 aaPredicted RBP7.51□□□□□ -1.21
NUP84YDL116W SAS4Q04003 481 aa7.51□□□□□ -1.21
NUP84YDL116W DSE3Q08729 430 aa7.51□□□□□ -1.21
NUP84YDL116W MYO1P08964 1928 aa7.51□□□□□ -1.21
NUP84YDL116W SNF3P10870 884 aa7.5□□□□□ -1.21
NUP84YDL116W SUP45P12385 437 aaKnown RBP7.5□□□□□ -1.21
NUP84YDL116W YKL050CP35736 922 aa7.5□□□□□ -1.21
NUP84YDL116W TPS3P38426 1054 aaKnown RBP7.5□□□□□ -1.21
NUP84YDL116W SMX2P40204 77 aaKnown RBP7.5□□□□□ -1.21
NUP84YDL116W NBP1P52919 319 aaPredicted RBP7.5□□□□□ -1.21
NUP84YDL116W BTN2P53286 410 aa7.5□□□□□ -1.21
NUP84YDL116W KEL3Q08979 651 aaPredicted RBP7.5□□□□□ -1.21
NUP84YDL116W NKP1Q12493 238 aa7.5□□□□□ -1.21
NUP84YDL116W SMC6Q12749 1114 aa7.5□□□□□ -1.21
NUP84YDL116W ENO1P00924 437 aaKnown RBP7.5□□□□□ -1.21
NUP84YDL116W ILV1P00927 576 aaKnown RBP7.5□□□□□ -1.21
NUP84YDL116W ECM2P38241 364 aaKnown RBP7.5□□□□□ -1.21
NUP84YDL116W DPL1Q05567 589 aa7.5□□□□□ -1.21
NUP84YDL116W YPR078CQ06813 372 aa7.5□□□□□ -1.21
NUP84YDL116W BDF2Q07442 638 aa7.5□□□□□ -1.21
NUP84YDL116W ALR1Q08269 859 aa7.5□□□□□ -1.21
NUP84YDL116W AIM41Q12032 185 aa7.5□□□□□ -1.21
NUP84YDL116W SEC39Q12745 709 aa7.5□□□□□ -1.21
NUP84YDL116W SEC14P24280 304 aaKnown RBP7.49□□□□□ -1.21
NUP84YDL116W RIX1P38883 763 aaPredicted RBP7.49□□□□□ -1.21
NUP84YDL116W UBP9P39967 754 aa7.49□□□□□ -1.21
NUP84YDL116W JJJ2P46997 583 aa7.49□□□□□ -1.21
NUP84YDL116W SPO19Q03029 223 aa7.49□□□□□ -1.21
NUP84YDL116W ATP25Q03153 612 aa7.49□□□□□ -1.21
NUP84YDL116W DAS2Q12084 232 aa7.49□□□□□ -1.21
NUP84YDL116W RAD59Q12223 238 aa7.49□□□□□ -1.21
NUP84YDL116W TRP2P00899 507 aaKnown RBP7.49□□□□□ -1.21
NUP84YDL116W SAS3P34218 831 aa7.49□□□□□ -1.21
NUP84YDL116W NPR2P39923 615 aa7.49□□□□□ -1.21
NUP84YDL116W TMA22P47089 198 aaPredicted RBP7.49□□□□□ -1.21
NUP84YDL116W SPO21Q12411 609 aa7.49□□□□□ -1.21
NUP84YDL116W IME1P21190 360 aa7.48□□□□□ -1.21
NUP84YDL116W KRE2P27809 442 aa7.48□□□□□ -1.21
NUP84YDL116W PCS60P38137 543 aaKnown RBP RIP-Chip data7.48□□□□□ -1.21not detected
NUP84YDL116W LCP5P40079 357 aaPredicted RBP7.48□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 61.5 ms