RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W YDL176WQ12027 708 aa2.15□□□□□ -2.07
TRM3YDL112W AAR2P32357 355 aaPredicted RBP2.15□□□□□ -2.07
TRM3YDL112W ALG3P38179 458 aa2.15□□□□□ -2.07
TRM3YDL112W ACO2P39533 789 aa2.15□□□□□ -2.07
TRM3YDL112W ICP55P40051 511 aa2.15□□□□□ -2.07
TRM3YDL112W GTS1P40956 396 aa2.15□□□□□ -2.07
TRM3YDL112W YJR107WP47145 328 aa2.15□□□□□ -2.07
TRM3YDL112W ALO1P54783 526 aaKnown RBP2.15□□□□□ -2.07
TRM3YDL112W MAG2Q06436 670 aaKnown RBP2.15□□□□□ -2.07
TRM3YDL112W YKL107WP34251 309 aa2.14□□□□□ -2.07
TRM3YDL112W APE3P37302 537 aaKnown RBP2.14□□□□□ -2.07
TRM3YDL112W HDA2Q06629 674 aa2.14□□□□□ -2.07
TRM3YDL112W SPO21Q12411 609 aa2.14□□□□□ -2.07
TRM3YDL112W CSR2Q12734 1121 aa2.14□□□□□ -2.07
TRM3YDL112W YDR461C-AQ2V2P7 80 aa2.14□□□□□ -2.07
TRM3YDL112W SWI1P09547 1314 aa2.14□□□□□ -2.07
TRM3YDL112W HSE1P38753 452 aa2.14□□□□□ -2.07
TRM3YDL112W NEM1P38757 446 aa2.14□□□□□ -2.07
TRM3YDL112W AIM21P40563 679 aa2.14□□□□□ -2.07
TRM3YDL112W ZDS1P50111 915 aaKnown RBP2.14□□□□□ -2.07
TRM3YDL112W YGR130CP53278 816 aa2.14□□□□□ -2.07
TRM3YDL112W GIS4Q04233 774 aa2.14□□□□□ -2.07
TRM3YDL112W YLR257WQ06146 321 aaKnown RBP2.14□□□□□ -2.07
TRM3YDL112W ACK1Q07622 623 aaPredicted RBP2.14□□□□□ -2.07
TRM3YDL112W YOR352WQ08816 343 aa2.14□□□□□ -2.07
TRM3YDL112W TOP1P04786 769 aa2.14□□□□□ -2.07
TRM3YDL112W SCP160P06105 1222 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07 RIP-Chip
TRM3YDL112W HTS1P07263 546 aaKnown RBP2.14□□□□□ -2.07
TRM3YDL112W PRD1P25375 712 aa2.14□□□□□ -2.07
TRM3YDL112W TRK2P28584 889 aa2.14□□□□□ -2.07
TRM3YDL112W FRD1P32614 470 aaKnown RBP2.14□□□□□ -2.07
TRM3YDL112W POL5P39985 1022 aaKnown RBP2.14□□□□□ -2.07
TRM3YDL112W YFL054CP43549 646 aa2.14□□□□□ -2.07
TRM3YDL112W YGR045CP53229 120 aa2.14□□□□□ -2.07
TRM3YDL112W RBA50Q04418 439 aa2.14□□□□□ -2.07
TRM3YDL112W OPI10Q08202 246 aa2.14□□□□□ -2.07
TRM3YDL112W LAP2Q10740 671 aa2.14□□□□□ -2.07
TRM3YDL112W YOR223WQ12015 292 aa2.14□□□□□ -2.07
TRM3YDL112W SKP1P52286 194 aa2.13□□□□□ -2.07
TRM3YDL112W YGL082WP53155 381 aa2.13□□□□□ -2.07
TRM3YDL112W TYW3P53177 273 aa2.13□□□□□ -2.07
TRM3YDL112W MAP1Q01662 387 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07not detected
TRM3YDL112W YPL109CQ02981 657 aa2.13□□□□□ -2.07
TRM3YDL112W RTT10Q08924 1013 aa2.13□□□□□ -2.07
TRM3YDL112W YPR071WQ12346 211 aa2.13□□□□□ -2.07
TRM3YDL112W FLO1P32768 1537 aa2.13□□□□□ -2.07
TRM3YDL112W TRP2P00899 507 aaKnown RBP2.13□□□□□ -2.07
TRM3YDL112W ENA1P13587 1091 aa2.13□□□□□ -2.07
TRM3YDL112W YRO2P38079 344 aa2.13□□□□□ -2.07
TRM3YDL112W YBR184WP38299 523 aa2.13□□□□□ -2.07
TRM3YDL112W MXR1P40029 184 aa2.13□□□□□ -2.07
TRM3YDL112W GYP7P48365 746 aa2.13□□□□□ -2.07
TRM3YDL112W PAP2P53632 584 aaKnown RBP2.13□□□□□ -2.07
TRM3YDL112W ENA2Q01896 1091 aa2.13□□□□□ -2.07
TRM3YDL112W EAR1Q03212 550 aa2.13□□□□□ -2.07
TRM3YDL112W NSI1Q12457 570 aa2.13□□□□□ -2.07
TRM3YDL112W ENA5Q12691 1091 aa2.13□□□□□ -2.07
TRM3YDL112W YGL140CP53120 1219 aa2.13□□□□□ -2.07
TRM3YDL112W BIO5P53744 561 aaKnown RBP2.13□□□□□ -2.07
TRM3YDL112W PRP42Q03776 544 aaKnown RBP2.13□□□□□ -2.07
TRM3YDL112W UTP5Q04177 643 aaKnown RBP2.13□□□□□ -2.07
TRM3YDL112W EAF1Q06337 982 aa2.13□□□□□ -2.07
TRM3YDL112W COQ4O13525 335 aa2.13□□□□□ -2.07
TRM3YDL112W RPP0P05317 312 aaKnown RBP2.13□□□□□ -2.07
TRM3YDL112W TOM70P07213 617 aaKnown RBP2.13□□□□□ -2.07
TRM3YDL112W DUS3Q06053 668 aaKnown RBP2.13□□□□□ -2.07
TRM3YDL112W YPR053CQ6Q5F3 151 aa2.13□□□□□ -2.07
TRM3YDL112W RSC6P25632 483 aa2.12□□□□□ -2.07
TRM3YDL112W SAP190P36123 1033 aa2.12□□□□□ -2.07
TRM3YDL112W YJL045WP47052 634 aa2.12□□□□□ -2.07
TRM3YDL112W PUS1Q12211 544 aaKnown RBP2.12□□□□□ -2.07
TRM3YDL112W FLO11P08640 1367 aa2.12□□□□□ -2.07
TRM3YDL112W SUP35P05453 685 aaKnown RBP2.12□□□□□ -2.07
TRM3YDL112W SYP1P25623 870 aaKnown RBP2.12□□□□□ -2.07
TRM3YDL112W PRO1P32264 428 aa2.12□□□□□ -2.07
TRM3YDL112W KNS1P32350 737 aaPredicted RBP2.12□□□□□ -2.07
TRM3YDL112W NNF1P47149 201 aa2.12□□□□□ -2.07
TRM3YDL112W MTC3P53077 123 aa2.12□□□□□ -2.07
TRM3YDL112W DAL5P15365 543 aa2.12□□□□□ -2.07
TRM3YDL112W THI4P32318 326 aa2.12□□□□□ -2.07
TRM3YDL112W ADD66P36040 267 aa2.12□□□□□ -2.07
TRM3YDL112W PTC7P38797 343 aa2.12□□□□□ -2.07
TRM3YDL112W SPL2P38839 148 aa2.12□□□□□ -2.07
TRM3YDL112W DSS1P39112 969 aa2.12□□□□□ -2.07
TRM3YDL112W LSB3P43603 459 aaKnown RBP2.12□□□□□ -2.07
TRM3YDL112W NET1P47035 1189 aa2.12□□□□□ -2.07
TRM3YDL112W HEF3P53978 1044 aaKnown RBP2.12□□□□□ -2.07
TRM3YDL112W TRM44Q02648 567 aaKnown RBP2.12□□□□□ -2.07
TRM3YDL112W GIC2Q06648 383 aa2.12□□□□□ -2.07
TRM3YDL112W BMS1Q08965 1183 aaKnown RBP2.12□□□□□ -2.07
TRM3YDL112W APL2P36000 726 aaPredicted RBP2.11□□□□□ -2.07
TRM3YDL112W FOL2P51601 243 aaKnown RBP2.11□□□□□ -2.07
TRM3YDL112W ORC1P54784 914 aaPredicted RBP2.11□□□□□ -2.07
TRM3YDL112W FMP30Q02883 468 aa2.11□□□□□ -2.07
TRM3YDL112W ECM30Q06673 1274 aa2.11□□□□□ -2.07
TRM3YDL112W TY3A-GQ12173 290 aa2.11□□□□□ -2.07
TRM3YDL112W TY3A-IQ99219 290 aa2.11□□□□□ -2.07
TRM3YDL112W HPR1P17629 752 aaKnown RBP2.11□□□□□ -2.07
TRM3YDL112W LYP1P32487 611 aa2.11□□□□□ -2.07
TRM3YDL112W TIM23P32897 222 aa2.11□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 40.9 ms