RNA–Protein interactions for RNA: YCR069W

CPR4, Transcript of Peptidyl-prolyl cis-trans isomerase (cyclophilin), yeast

Gene CPR4, Length 957 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CPR4	YCR069W	SRO9	P25567	434 aa	Known RBP	5.65	□□□□□ -1.5
CPR4	YCR069W	KIP1	P28742	1111 aa		5.65	□□□□□ -1.5
CPR4	YCR069W	HSP104	P31539	908 aa	Known RBP	5.65	□□□□□ -1.5
CPR4	YCR069W	YKL133C	P36066	463 aa		5.65	□□□□□ -1.5
CPR4	YCR069W	ALG3	P38179	458 aa		5.65	□□□□□ -1.5
CPR4	YCR069W	YJR107W	P47145	328 aa		5.65	□□□□□ -1.5
CPR4	YCR069W	ZDS1	P50111	915 aa	Known RBP	5.65	□□□□□ -1.5
CPR4	YCR069W	ROD1	Q02805	837 aa		5.65	□□□□□ -1.5
CPR4	YCR069W	YRF1-3	P0CX14	1859 aa		5.64	□□□□□ -1.51
CPR4	YCR069W	YRF1-7	P0CX15	1859 aa		5.64	□□□□□ -1.51
CPR4	YCR069W	YRF1-6	P53819	1859 aa		5.64	□□□□□ -1.51
CPR4	YCR069W	AIM26	P32858	118 aa		5.64	□□□□□ -1.51
CPR4	YCR069W	GPB2	P39717	880 aa		5.64	□□□□□ -1.51
CPR4	YCR069W	MPP10	P47083	593 aa	Known RBP	5.64	□□□□□ -1.51
CPR4	YCR069W	GYP7	P48365	746 aa		5.64	□□□□□ -1.51
CPR4	YCR069W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	5.64	□□□□□ -1.51	not detected
CPR4	YCR069W	SPR28	Q04921	423 aa		5.64	□□□□□ -1.51
CPR4	YCR069W	RRP15	Q06511	250 aa	Predicted RBP	5.64	□□□□□ -1.51
CPR4	YCR069W	YDL177C	Q12257	170 aa		5.64	□□□□□ -1.51
CPR4	YCR069W	HEM3	P28789	327 aa		5.63	□□□□□ -1.51
CPR4	YCR069W	ETP1	P38748	585 aa	Known RBP	5.63	□□□□□ -1.51
CPR4	YCR069W	FYV10	P40492	516 aa		5.63	□□□□□ -1.51
CPR4	YCR069W	FOL2	P51601	243 aa	Known RBP	5.63	□□□□□ -1.51
CPR4	YCR069W	SIW14	P53965	281 aa		5.63	□□□□□ -1.51
CPR4	YCR069W	RAT1	Q02792	1006 aa	Known RBP	5.63	□□□□□ -1.51
CPR4	YCR069W	THI22	Q06490	572 aa		5.63	□□□□□ -1.51
CPR4	YCR069W	ATG13	Q06628	738 aa		5.63	□□□□□ -1.51
CPR4	YCR069W	MRL1	Q06815	381 aa		5.63	□□□□□ -1.51
CPR4	YCR069W	SEC8	P32855	1065 aa		5.62	□□□□□ -1.51
CPR4	YCR069W	MRPL22	P53881	309 aa		5.62	□□□□□ -1.51
CPR4	YCR069W	HEF3	P53978	1044 aa	Known RBP	5.62	□□□□□ -1.51
CPR4	YCR069W	RSC58	Q07979	502 aa		5.62	□□□□□ -1.51
CPR4	YCR069W	RCL1	Q08096	367 aa	Predicted RBP	5.62	□□□□□ -1.51
CPR4	YCR069W	RVB2	Q12464	471 aa	Known RBP	5.62	□□□□□ -1.51
CPR4	YCR069W	COQ4	O13525	335 aa		5.61	□□□□□ -1.51
CPR4	YCR069W	SUI2	P20459	304 aa	Known RBP	5.61	□□□□□ -1.51
CPR4	YCR069W	GRX1	P25373	110 aa	Known RBP	5.61	□□□□□ -1.51
CPR4	YCR069W	MKK2	P32491	506 aa		5.61	□□□□□ -1.51
CPR4	YCR069W	FPR3	P38911	411 aa	Known RBP	5.61	□□□□□ -1.51
CPR4	YCR069W	HXT13	P39924	564 aa		5.61	□□□□□ -1.51
CPR4	YCR069W	ENT3	P47160	408 aa		5.61	□□□□□ -1.51
CPR4	YCR069W	GNP1	P48813	663 aa		5.61	□□□□□ -1.51
CPR4	YCR069W	NUP145	P49687	1317 aa		5.61	□□□□□ -1.51
CPR4	YCR069W	HXT17	P53631	564 aa		5.61	□□□□□ -1.51
CPR4	YCR069W	HXT15	P54854	567 aa		5.61	□□□□□ -1.51
CPR4	YCR069W	HOS3	Q02959	697 aa	Known RBP	5.61	□□□□□ -1.51
CPR4	YCR069W	NBA1	Q08229	501 aa	Known RBP	5.61	□□□□□ -1.51
CPR4	YCR069W	GCR1	P07261	785 aa		5.6	□□□□□ -1.51
CPR4	YCR069W	TNA1	P53322	534 aa		5.6	□□□□□ -1.51
CPR4	YCR069W	YPL260W	Q08977	551 aa		5.6	□□□□□ -1.51
CPR4	YCR069W	SPO21	Q12411	609 aa		5.6	□□□□□ -1.51
CPR4	YCR069W	SPS1	P08458	490 aa		5.59	□□□□□ -1.51
CPR4	YCR069W	OSM1	P21375	501 aa	Known RBP	5.59	□□□□□ -1.51
CPR4	YCR069W	CCZ1	P38273	704 aa		5.59	□□□□□ -1.51
CPR4	YCR069W	YBP2	P53169	641 aa		5.59	□□□□□ -1.51
CPR4	YCR069W	ADE16	P54113	591 aa	Known RBP	5.59	□□□□□ -1.51
CPR4	YCR069W	RMT2	Q03305	412 aa		5.59	□□□□□ -1.51
CPR4	YCR069W	ESF1	Q06344	628 aa	Known RBP	5.59	□□□□□ -1.51
CPR4	YCR069W	RTT109	Q07794	436 aa		5.59	□□□□□ -1.51
CPR4	YCR069W	RAD4	P14736	754 aa		5.58	□□□□□ -1.52
CPR4	YCR069W	SYP1	P25623	870 aa	Known RBP	5.58	□□□□□ -1.52
CPR4	YCR069W	PEP7	P32609	515 aa		5.58	□□□□□ -1.52
CPR4	YCR069W	BAP2	P38084	609 aa		5.58	□□□□□ -1.52
CPR4	YCR069W	AIM3	P38266	947 aa	Known RBP	5.58	□□□□□ -1.52
CPR4	YCR069W	RPN3	P40016	523 aa	Known RBP	5.58	□□□□□ -1.52
CPR4	YCR069W	DOT5	P40553	215 aa		5.58	□□□□□ -1.52
CPR4	YCR069W	DNM1	P54861	757 aa		5.58	□□□□□ -1.52
CPR4	YCR069W	SSP2	Q08646	371 aa		5.58	□□□□□ -1.52
CPR4	YCR069W	BMS1	Q08965	1183 aa	Known RBP	5.58	□□□□□ -1.52
CPR4	YCR069W	SNF5	P18480	905 aa		5.57	□□□□□ -1.52
CPR4	YCR069W	PRP6	P19735	899 aa	Predicted RBP	5.57	□□□□□ -1.52
CPR4	YCR069W	ASF1	P32447	279 aa		5.57	□□□□□ -1.52
CPR4	YCR069W	THI80	P35202	319 aa		5.57	□□□□□ -1.52
CPR4	YCR069W	SNO2	P53823	222 aa		5.57	□□□□□ -1.52
CPR4	YCR069W	ECM16	Q04217	1267 aa	Known RBP	5.57	□□□□□ -1.52
CPR4	YCR069W	YOL057W	Q08225	711 aa		5.57	□□□□□ -1.52
CPR4	YCR069W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	5.56	□□□□□ -1.52	not detected
CPR4	YCR069W	RGD1	P38339	666 aa		5.56	□□□□□ -1.52
CPR4	YCR069W	RRT14	P40470	206 aa		5.56	□□□□□ -1.52
CPR4	YCR069W	SRT1	Q03175	343 aa		5.56	□□□□□ -1.52
CPR4	YCR069W	RSB1	Q08417	382 aa		5.56	□□□□□ -1.52
CPR4	YCR069W	RIM15	P43565	1770 aa		5.56	□□□□□ -1.52
CPR4	YCR069W	DBP5	P20449	482 aa	Known RBP	5.55	□□□□□ -1.52
CPR4	YCR069W	YKR075C	P36155	307 aa		5.55	□□□□□ -1.52
CPR4	YCR069W	PIK1	P39104	1066 aa		5.55	□□□□□ -1.52
CPR4	YCR069W	YIL092W	P40497	633 aa		5.55	□□□□□ -1.52
CPR4	YCR069W	CNN1	P43618	361 aa		5.55	□□□□□ -1.52
CPR4	YCR069W	YJR008W	P47085	338 aa		5.55	□□□□□ -1.52
CPR4	YCR069W	OYE2	Q03558	400 aa	Known RBP	5.55	□□□□□ -1.52
CPR4	YCR069W	SUP35	P05453	685 aa	Known RBP	5.54	□□□□□ -1.52
CPR4	YCR069W	RPS19A	P07280	144 aa	Known RBP	5.54	□□□□□ -1.52
CPR4	YCR069W	RPS19B	P07281	144 aa	Predicted RBP	5.54	□□□□□ -1.52
CPR4	YCR069W	MLS1	P30952	554 aa		5.54	□□□□□ -1.52
CPR4	YCR069W	YFL054C	P43549	646 aa		5.54	□□□□□ -1.52
CPR4	YCR069W	RIM8	P53179	542 aa		5.54	□□□□□ -1.52
CPR4	YCR069W	ENV11	P53246	860 aa		5.54	□□□□□ -1.52
CPR4	YCR069W	ESC8	Q08119	714 aa		5.54	□□□□□ -1.52
CPR4	YCR069W	YER152C	P10356	443 aa		5.53	□□□□□ -1.52
CPR4	YCR069W	RAD27	P26793	382 aa		5.53	□□□□□ -1.52
CPR4	YCR069W	RER2	P35196	286 aa		5.53	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms