RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 YLR122CQ12312 125 aa10.87□□□□□ -0.67
NME1NME1 MEF1P25039 761 aa10.86□□□□□ -0.67
NME1NME1 FUN30P31380 1131 aa10.86□□□□□ -0.67
NME1NME1 KAE1P36132 386 aa10.86□□□□□ -0.67
NME1NME1 GRX4P32642 244 aa10.85□□□□□ -0.67
NME1NME1 SPC29P33419 253 aa10.85□□□□□ -0.67
NME1NME1 PTC7P38797 343 aa10.85□□□□□ -0.67
NME1NME1 GTS1P40956 396 aa10.85□□□□□ -0.67
NME1NME1 NIT3P49954 291 aa10.85□□□□□ -0.67
NME1NME1 YPR196WQ06595 470 aa10.85□□□□□ -0.67
NME1NME1 OSW2Q12202 724 aa10.85□□□□□ -0.67
NME1NME1 PUS1Q12211 544 aaKnown RBP10.85□□□□□ -0.67
NME1NME1 VBA3P25594 458 aa10.84□□□□□ -0.67
NME1NME1 DAM1P53267 343 aa10.84□□□□□ -0.67
NME1NME1 SPS1P08458 490 aa10.83□□□□□ -0.68
NME1NME1 UBP12P39538 1254 aa10.83□□□□□ -0.68
NME1NME1 HLJ1P48353 224 aa10.83□□□□□ -0.68
NME1NME1 YGR283CP53336 341 aaPredicted RBP10.83□□□□□ -0.68
NME1NME1 SDH1Q00711 640 aa10.83□□□□□ -0.68
NME1NME1 EMC3P36039 253 aa10.82□□□□□ -0.68
NME1NME1 GYP8P43570 497 aa10.82□□□□□ -0.68
NME1NME1 HFM1P51979 1187 aa10.82□□□□□ -0.68
NME1NME1 YNR029CP53729 429 aaKnown RBP10.82□□□□□ -0.68
NME1NME1 YNL193WP53870 558 aa10.82□□□□□ -0.68
NME1NME1 RPC82P32349 654 aa10.81□□□□□ -0.68
NME1NME1 RFC5P38251 354 aa10.81□□□□□ -0.68
NME1NME1 YBR238CP38330 731 aaKnown RBP10.81□□□□□ -0.68
NME1NME1 NPP2P39997 493 aa10.81□□□□□ -0.68
NME1NME1 SEC26P41810 973 aaKnown RBP10.81□□□□□ -0.68
NME1NME1 ZDS1P50111 915 aaKnown RBP10.81□□□□□ -0.68
NME1NME1 MAP1Q01662 387 aaKnown RBP RIP-Chip data10.81□□□□□ -0.68not detected
NME1NME1 ENV7Q12003 364 aa10.81□□□□□ -0.68
NME1NME1 SSB1P11484 613 aaKnown RBP10.8□□□□□ -0.68
NME1NME1 SSB2P40150 613 aaKnown RBP10.8□□□□□ -0.68
NME1NME1 YGR130CP53278 816 aa10.8□□□□□ -0.68
NME1NME1 SFB2P53953 876 aa10.8□□□□□ -0.68
NME1NME1 SSY1Q03770 852 aa10.8□□□□□ -0.68
NME1NME1 ADP1P25371 1049 aa10.79□□□□□ -0.68
NME1NME1 YKE2P52553 114 aa10.79□□□□□ -0.68
NME1NME1 CDC9P04819 755 aa10.78□□□□□ -0.68
NME1NME1 YEN1P40028 759 aa10.78□□□□□ -0.68
NME1NME1 MPH2P0CD99 609 aa10.77□□□□□ -0.69
NME1NME1 ATP25Q03153 612 aa10.77□□□□□ -0.69
NME1NME1 YDR514CQ04408 483 aa10.77□□□□□ -0.69
NME1NME1 GCD1P09032 578 aaPredicted RBP10.76□□□□□ -0.69
NME1NME1 KIN2P13186 1147 aaKnown RBP10.76□□□□□ -0.69
NME1NME1 YAP1801P38856 637 aa10.76□□□□□ -0.69
NME1NME1 PMT3P47190 753 aa10.76□□□□□ -0.69
NME1NME1 FOL2P51601 243 aaKnown RBP10.76□□□□□ -0.69
NME1NME1 MET7Q08645 548 aa10.76□□□□□ -0.69
NME1NME1 SRD1P09007 221 aa10.75□□□□□ -0.69
NME1NME1 RFA1P22336 621 aaKnown RBP10.75□□□□□ -0.69
NME1NME1 APL1P27351 700 aa10.75□□□□□ -0.69
NME1NME1 SDA1P53313 767 aaKnown RBP10.75□□□□□ -0.69
NME1NME1 CYC7P00045 113 aa10.74□□□□□ -0.69
NME1NME1 STO1P34160 861 aaKnown RBP10.74□□□□□ -0.69
NME1NME1 MTC2P34246 357 aa10.74□□□□□ -0.69
NME1NME1 ECM21P38167 1117 aaKnown RBP10.74□□□□□ -0.69
NME1NME1 RSM24Q03976 319 aa10.74□□□□□ -0.69
NME1NME1 RSC3Q06639 885 aa10.74□□□□□ -0.69
NME1NME1 REH1Q06709 432 aa10.74□□□□□ -0.69
NME1NME1 YLR001CQ07895 862 aa10.74□□□□□ -0.69
NME1NME1 TOM20P35180 183 aa10.73□□□□□ -0.69
NME1NME1 ENV11P53246 860 aa10.73□□□□□ -0.69
NME1NME1 XYL2Q07993 356 aa10.73□□□□□ -0.69
NME1NME1 NUP145P49687 1317 aa10.73□□□□□ -0.69
NME1NME1 RAD18P10862 487 aa10.72□□□□□ -0.69
NME1NME1 YEL1P34225 687 aa10.72□□□□□ -0.69
NME1NME1 YGR237CP50089 785 aa10.71□□□□□ -0.69
NME1NME1 THI73Q07904 523 aa10.71□□□□□ -0.69
NME1NME1 CAF16P43569 289 aa10.7□□□□□ -0.7
NME1NME1 JSN1P47135 1091 aaKnown RBP RIP-Chip data10.7□□□□□ -0.7not detected
NME1NME1 NOG2P53742 486 aaKnown RBP10.7□□□□□ -0.7
NME1NME1 ABZ1P37254 787 aaPredicted RBP10.69□□□□□ -0.7
NME1NME1 TY4A-JP47023 414 aa10.69□□□□□ -0.7
NME1NME1 VPS30Q02948 557 aa10.69□□□□□ -0.7
NME1NME1 NOT3P06102 836 aaKnown RBP10.68□□□□□ -0.7
NME1NME1 PER1P25625 357 aa10.68□□□□□ -0.7
NME1NME1 MED7Q08278 222 aa10.68□□□□□ -0.7
NME1NME1 DAL7P21826 554 aa10.67□□□□□ -0.7
NME1NME1 URA1P28272 314 aaPredicted RBP10.67□□□□□ -0.7
NME1NME1 UME1Q03010 460 aa10.67□□□□□ -0.7
NME1NME1 MSC2Q03455 724 aa10.67□□□□□ -0.7
NME1NME1 SIZ1Q04195 904 aa10.67□□□□□ -0.7
NME1NME1 TRP3P00937 484 aa10.66□□□□□ -0.7
NME1NME1 PCL2P25693 308 aa10.66□□□□□ -0.7
NME1NME1 MGS1P40151 587 aa10.66□□□□□ -0.7
NME1NME1 CCT8P47079 568 aaKnown RBP10.66□□□□□ -0.7
NME1NME1 TAD1P53065 400 aa10.66□□□□□ -0.7
NME1NME1 COG8Q04632 607 aa10.66□□□□□ -0.7
NME1NME1 RIB2Q12362 591 aaKnown RBP10.66□□□□□ -0.7
NME1NME1 LPX1Q12405 387 aaKnown RBP10.66□□□□□ -0.7
NME1NME1 RPS9AO13516 197 aaKnown RBP10.65□□□□□ -0.7
NME1NME1 MCD4P36051 919 aa10.65□□□□□ -0.7
NME1NME1 RAI1P53063 387 aaKnown RBP10.65□□□□□ -0.7
NME1NME1 SNP1Q00916 300 aaPredicted RBP10.65□□□□□ -0.7
NME1NME1 SFL1P20134 766 aa10.64□□□□□ -0.71
NME1NME1 SRP101P32916 621 aa10.64□□□□□ -0.71
NME1NME1 CEP3P40969 608 aa10.64□□□□□ -0.71
NME1NME1 HSF1P10961 833 aa10.63□□□□□ -0.71
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms