RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 TDO2P48775 406 aa17.77■□□□□ 0.43
CUX1-214ENST00000550008 RAI14Q9P0K7 980 aa17.77■□□□□ 0.43
CUX1-214ENST00000550008 SART3Q15020 963 aaKnown RBP17.76■□□□□ 0.43
CUX1-214ENST00000550008 CCAR2Q8N163 923 aaKnown RBP17.76■□□□□ 0.43
CUX1-214ENST00000550008 ACSBG1Q96GR2 724 aa17.76■□□□□ 0.43
CUX1-214ENST00000550008 ESPNB1AK53 854 aa17.76■□□□□ 0.43
CUX1-214ENST00000550008 CCDC173Q0VFZ6 552 aa17.76■□□□□ 0.43
CUX1-214ENST00000550008 KRT32Q14532 448 aa17.76■□□□□ 0.43
CUX1-214ENST00000550008 SOS1Q07889 1333 aaPredicted RBP17.75■□□□□ 0.43
CUX1-214ENST00000550008 AIDAQ96BJ3 306 aa17.75■□□□□ 0.43
CUX1-214ENST00000550008 USP26Q9BXU7 913 aa17.75■□□□□ 0.43
CUX1-214ENST00000550008 BICC1Q9H694 974 aaKnown RBP17.75■□□□□ 0.43
CUX1-214ENST00000550008 IQGAP3Q86VI3 1631 aa17.74■□□□□ 0.43
CUX1-214ENST00000550008 SYNMO15061 1565 aa17.74■□□□□ 0.43
CUX1-214ENST00000550008 GJB2P29033 226 aa17.74■□□□□ 0.43
CUX1-214ENST00000550008 CHMLP26374 656 aa17.74■□□□□ 0.43
CUX1-214ENST00000550008 NDUFB9Q9Y6M9 179 aa17.74■□□□□ 0.43
CUX1-214ENST00000550008 TRPM1Q7Z4N2 1603 aa17.74■□□□□ 0.43
CUX1-214ENST00000550008 RBM8AQ9Y5S9 174 aaKnown RBP17.74■□□□□ 0.43
CUX1-214ENST00000550008 ALDH1L1O75891 902 aa17.73■□□□□ 0.43
CUX1-214ENST00000550008 IMMTQ16891 758 aaKnown RBP17.73■□□□□ 0.43
CUX1-214ENST00000550008 IQSEC3Q9UPP2 1182 aaPredicted RBP17.73■□□□□ 0.43
CUX1-214ENST00000550008 ABCC3O15438 1527 aa17.73■□□□□ 0.43
CUX1-214ENST00000550008 MINDY4BA8MYZ0 360 aa17.73■□□□□ 0.43
CUX1-214ENST00000550008 CCDC192P0DO97 292 aa17.73■□□□□ 0.43
CUX1-214ENST00000550008 CCDC39Q9UFE4 941 aa17.73■□□□□ 0.43
CUX1-214ENST00000550008 U3KPZ7 1027 aaPredicted RBP17.73■□□□□ 0.43
CUX1-214ENST00000550008 HSP90AB3PQ58FF7 597 aa17.72■□□□□ 0.43
CUX1-214ENST00000550008 ZNF790Q6PG37 636 aa17.72■□□□□ 0.43
CUX1-214ENST00000550008 CKAP2LQ8IYA6 745 aa17.72■□□□□ 0.43
CUX1-214ENST00000550008 CTNNA3Q9UI47 895 aa17.72■□□□□ 0.43
CUX1-214ENST00000550008 STX6O43752 255 aa17.72■□□□□ 0.43
CUX1-214ENST00000550008 IGHMBP2P38935 993 aaKnown RBP17.72■□□□□ 0.43
CUX1-214ENST00000550008 PLXNC1O60486 1568 aa17.72■□□□□ 0.43
CUX1-214ENST00000550008 HOMER1Q86YM7 354 aa17.72■□□□□ 0.43
CUX1-214ENST00000550008 NACAP1Q9BZK3 213 aa17.72■□□□□ 0.43
CUX1-214ENST00000550008 EFCAB6Q5THR3 1501 aa17.71■□□□□ 0.43
CUX1-214ENST00000550008 NUP62CLQ9H1M0 184 aa17.71■□□□□ 0.43
CUX1-214ENST00000550008 GSPT1P15170 499 aaKnown RBP17.71■□□□□ 0.43
CUX1-214ENST00000550008 SNX21Q969T3 373 aa17.71■□□□□ 0.43
CUX1-214ENST00000550008 ZNF396Q96N95 335 aaPredicted RBP17.71■□□□□ 0.43
CUX1-214ENST00000550008 DDX21Q9NR30 783 aaKnown RBP eCLIP17.71■□□□□ 0.43
CUX1-214ENST00000550008 AKAP2Q9Y2D5 859 aa17.71■□□□□ 0.43
CUX1-214ENST00000550008 NMIQ13287 307 aaPredicted RBP17.71■□□□□ 0.43
CUX1-214ENST00000550008 BRF1Q92994 677 aa17.71■□□□□ 0.43
CUX1-214ENST00000550008 ZNF496Q96IT1 587 aaPredicted RBP17.71■□□□□ 0.43
CUX1-214ENST00000550008 GNL3LQ9NVN8 582 aaKnown RBP17.7■□□□□ 0.42
CUX1-214ENST00000550008 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.7■□□□□ 0.42
CUX1-214ENST00000550008 CCDC144CPQ8IYA2 1237 aa17.7■□□□□ 0.42
CUX1-214ENST00000550008 KIF1BO60333 1816 aa17.7■□□□□ 0.42
CUX1-214ENST00000550008 ABCC4O15439 1325 aa17.7■□□□□ 0.42
CUX1-214ENST00000550008 CCDC69A6NI79 296 aa17.7■□□□□ 0.42
CUX1-214ENST00000550008 SMC2O95347 1197 aa17.7■□□□□ 0.42
CUX1-214ENST00000550008 HELBQ8NG08 1087 aaPredicted RBP17.7■□□□□ 0.42
CUX1-214ENST00000550008 XRCC6P12956 609 aaKnown RBP eCLIP17.7■□□□□ 0.42
CUX1-214ENST00000550008 EIF4A1P60842 406 aaKnown RBP17.7■□□□□ 0.42
CUX1-214ENST00000550008 NGLY1Q96IV0 654 aa17.7■□□□□ 0.42
CUX1-214ENST00000550008 USP44Q9H0E7 712 aa17.7■□□□□ 0.42
CUX1-214ENST00000550008 A1BGP04217 495 aa17.69■□□□□ 0.42
CUX1-214ENST00000550008 CHST3Q7LGC8 479 aa17.69■□□□□ 0.42
CUX1-214ENST00000550008 ANKRD18BA2A2Z9 1011 aa17.69■□□□□ 0.42
CUX1-214ENST00000550008 TIMM10P62072 90 aa17.69■□□□□ 0.42
CUX1-214ENST00000550008 HECW2Q9P2P5 1572 aa17.69■□□□□ 0.42
CUX1-214ENST00000550008 TFCP2Q12800 502 aa17.69■□□□□ 0.42
CUX1-214ENST00000550008 SH2B1Q9NRF2 756 aaPredicted RBP17.69■□□□□ 0.42
CUX1-214ENST00000550008 TET3O43151 1660 aa17.68■□□□□ 0.42
CUX1-214ENST00000550008 ZSCAN25Q6NSZ9 544 aa17.68■□□□□ 0.42
CUX1-214ENST00000550008 PDILTQ8N807 584 aa17.68■□□□□ 0.42
CUX1-214ENST00000550008 NEK1Q96PY6 1258 aa17.68■□□□□ 0.42
CUX1-214ENST00000550008 LETM1O95202 739 aaPredicted RBP17.68■□□□□ 0.42
CUX1-214ENST00000550008 ATP2B2Q01814 1243 aa17.68■□□□□ 0.42
CUX1-214ENST00000550008 SLC4A8Q2Y0W8 1093 aa17.68■□□□□ 0.42
CUX1-214ENST00000550008 KLHL34Q8N239 644 aa17.68■□□□□ 0.42
CUX1-214ENST00000550008 TRIM34Q9BYJ4 488 aa17.68■□□□□ 0.42
CUX1-214ENST00000550008 USP25Q9UHP3 1055 aa17.68■□□□□ 0.42
CUX1-214ENST00000550008 RBM25P49756 843 aaKnown RBP17.67■□□□□ 0.42
CUX1-214ENST00000550008 FILIP1Q7Z7B0 1213 aa17.67■□□□□ 0.42
CUX1-214ENST00000550008 DCAF5Q96JK2 942 aa17.67■□□□□ 0.42
CUX1-214ENST00000550008 UBAC1Q9BSL1 405 aa17.67■□□□□ 0.42
CUX1-214ENST00000550008 NAPBQ9H115 298 aa17.67■□□□□ 0.42
CUX1-214ENST00000550008 CNPY2Q9Y2B0 182 aa17.67■□□□□ 0.42
CUX1-214ENST00000550008 IL2RBP14784 551 aa17.67■□□□□ 0.42
CUX1-214ENST00000550008 AK2P54819 239 aa17.67■□□□□ 0.42
CUX1-214ENST00000550008 RBM10P98175 930 aaKnown RBP17.67■□□□□ 0.42
CUX1-214ENST00000550008 TRIM22Q8IYM9 498 aa17.67■□□□□ 0.42
CUX1-214ENST00000550008 PCMTD1Q96MG8 357 aaPredicted RBP17.66■□□□□ 0.42
CUX1-214ENST00000550008 ZNF213O14771 459 aa17.66■□□□□ 0.42
CUX1-214ENST00000550008 EDC3Q96F86 508 aaKnown RBP17.66■□□□□ 0.42
CUX1-214ENST00000550008 FAM89AQ96GI7 184 aa17.66■□□□□ 0.42
CUX1-214ENST00000550008 SUCLG2Q96I99 432 aa17.66■□□□□ 0.42
CUX1-214ENST00000550008 RTL1A6NKG5 1358 aa17.66■□□□□ 0.42
CUX1-214ENST00000550008 UNC13BO14795 1591 aa17.66■□□□□ 0.42
CUX1-214ENST00000550008 XBP1P17861 261 aa17.66■□□□□ 0.42
CUX1-214ENST00000550008 KLHL40Q2TBA0 621 aa17.66■□□□□ 0.42
CUX1-214ENST00000550008 PRAMEF22A3QJZ6 481 aa17.65■□□□□ 0.42
CUX1-214ENST00000550008 PDE4CQ08493 712 aa17.65■□□□□ 0.42
CUX1-214ENST00000550008 SIRT2Q8IXJ6 389 aa17.65■□□□□ 0.42
CUX1-214ENST00000550008 SIRT1Q96EB6 747 aa17.65■□□□□ 0.42
CUX1-214ENST00000550008 CFAP45Q9UL16 551 aa17.65■□□□□ 0.42
CUX1-214ENST00000550008 USP16Q9Y5T5 823 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms