RNA–Protein interactions for RNA: ENST00000508930.1

TRIM41-204, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 3,834 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-204ENST00000508930 PAXBP1Q9Y5B6 917 aa16.99■□□□□ 0.31
TRIM41-204ENST00000508930 MRVI1Q9Y6F6 885 aa16.98■□□□□ 0.31
TRIM41-204ENST00000508930 NPHP1O15259 732 aa16.98■□□□□ 0.31
TRIM41-204ENST00000508930 EIF2S2P20042 333 aaKnown RBP16.98■□□□□ 0.31
TRIM41-204ENST00000508930 BBXQ8WY36 941 aaPredicted RBP16.98■□□□□ 0.31
TRIM41-204ENST00000508930 HYPKQ9NX55 129 aa16.98■□□□□ 0.31
TRIM41-204ENST00000508930 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.98■□□□□ 0.31
TRIM41-204ENST00000508930 V9GYY5 206 aaPredicted RBP16.98■□□□□ 0.31
TRIM41-204ENST00000508930 ZNF75DP51815 510 aa16.97■□□□□ 0.31
TRIM41-204ENST00000508930 CEP135Q66GS9 1140 aa16.97■□□□□ 0.31
TRIM41-204ENST00000508930 KIF20BQ96Q89 1820 aa16.97■□□□□ 0.31
TRIM41-204ENST00000508930 BECN2A8MW95 431 aa16.97■□□□□ 0.31
TRIM41-204ENST00000508930 ZSCAN25Q6NSZ9 544 aa16.97■□□□□ 0.31
TRIM41-204ENST00000508930 DNAJC25Q9H1X3 360 aa16.97■□□□□ 0.31
TRIM41-204ENST00000508930 AMPHP49418 695 aa16.97■□□□□ 0.31
TRIM41-204ENST00000508930 GPATCH3Q96I76 525 aa16.97■□□□□ 0.31
TRIM41-204ENST00000508930 VPS53Q5VIR6 699 aa16.96■□□□□ 0.31
TRIM41-204ENST00000508930 DDX19AQ9NUU7 478 aaKnown RBP16.96■□□□□ 0.31
TRIM41-204ENST00000508930 PPP6R1Q9UPN7 881 aa16.96■□□□□ 0.31
TRIM41-204ENST00000508930 GLRX3O76003 335 aaKnown RBP16.96■□□□□ 0.31
TRIM41-204ENST00000508930 STK3Q13188 491 aa16.96■□□□□ 0.31
TRIM41-204ENST00000508930 SCAND2PQ9GZW5 306 aaPredicted RBP16.96■□□□□ 0.31
TRIM41-204ENST00000508930 USP44Q9H0E7 712 aa16.96■□□□□ 0.31
TRIM41-204ENST00000508930 HECW2Q9P2P5 1572 aa16.96■□□□□ 0.31
TRIM41-204ENST00000508930 CLASRPQ8N2M8 674 aaKnown RBP16.96■□□□□ 0.31
TRIM41-204ENST00000508930 IFIT2P09913 472 aaKnown RBP16.95■□□□□ 0.3
TRIM41-204ENST00000508930 ADCK5Q3MIX3 580 aa16.95■□□□□ 0.3
TRIM41-204ENST00000508930 HSP90AB4PQ58FF6 505 aa16.95■□□□□ 0.3
TRIM41-204ENST00000508930 HDGFL1Q5TGJ6 251 aa16.95■□□□□ 0.3
TRIM41-204ENST00000508930 TCEANC2Q96MN5 208 aa16.95■□□□□ 0.3
TRIM41-204ENST00000508930 HTATSF1O43719 755 aaKnown RBP16.95■□□□□ 0.3
TRIM41-204ENST00000508930 GABPB1Q06547 395 aaPredicted RBP16.95■□□□□ 0.3
TRIM41-204ENST00000508930 ME3Q16798 604 aa16.95■□□□□ 0.3
TRIM41-204ENST00000508930 CDC37L1Q7L3B6 337 aa16.95■□□□□ 0.3
TRIM41-204ENST00000508930 FILIP1Q7Z7B0 1213 aa16.95■□□□□ 0.3
TRIM41-204ENST00000508930 CTNNA3Q9UI47 895 aa16.95■□□□□ 0.3
TRIM41-204ENST00000508930 MLH3Q9UHC1 1453 aa16.95■□□□□ 0.3
TRIM41-204ENST00000508930 PTPN14Q15678 1187 aa16.95■□□□□ 0.3
TRIM41-204ENST00000508930 PTH1RQ03431 593 aa16.94■□□□□ 0.3
TRIM41-204ENST00000508930 TRMT1Q9NXH9 659 aaKnown RBP16.94■□□□□ 0.3
TRIM41-204ENST00000508930 CCDC66A2RUB6 948 aa16.94■□□□□ 0.3
TRIM41-204ENST00000508930 SSH3Q8TE77 659 aa16.94■□□□□ 0.3
TRIM41-204ENST00000508930 H3BQV1 296 aa16.94■□□□□ 0.3
TRIM41-204ENST00000508930 IFFO2Q5TF58 517 aa16.94■□□□□ 0.3
TRIM41-204ENST00000508930 KRT222Q8N1A0 295 aa16.94■□□□□ 0.3
TRIM41-204ENST00000508930 PI4K2BQ8TCG2 481 aa16.94■□□□□ 0.3
TRIM41-204ENST00000508930 ERICH4A6NGS2 130 aa16.93■□□□□ 0.3
TRIM41-204ENST00000508930 PSMA5P28066 241 aa16.93■□□□□ 0.3
TRIM41-204ENST00000508930 CEBPZQ03701 1054 aaKnown RBP16.93■□□□□ 0.3
TRIM41-204ENST00000508930 CACTINQ8WUQ7 758 aaKnown RBP16.93■□□□□ 0.3
TRIM41-204ENST00000508930 FBXW7Q969H0 707 aa16.93■□□□□ 0.3
TRIM41-204ENST00000508930 FRMPD1Q5SYB0 1578 aa16.92■□□□□ 0.3
TRIM41-204ENST00000508930 FGD1P98174 961 aa16.92■□□□□ 0.3
TRIM41-204ENST00000508930 BLOC1S2Q6QNY1 142 aa16.92■□□□□ 0.3
TRIM41-204ENST00000508930 PIK3C2BO00750 1634 aa16.92■□□□□ 0.3
TRIM41-204ENST00000508930 IL17RAQ96F46 866 aa16.92■□□□□ 0.3
TRIM41-204ENST00000508930 NPHP3Q7Z494 1330 aa16.92■□□□□ 0.3
TRIM41-204ENST00000508930 MLECQ14165 292 aa16.92■□□□□ 0.3
TRIM41-204ENST00000508930 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.92■□□□□ 0.3
TRIM41-204ENST00000508930 DDX41Q9UJV9 622 aaKnown RBP16.92■□□□□ 0.3
TRIM41-204ENST00000508930 MAP3K19Q56UN5 1328 aa16.92■□□□□ 0.3
TRIM41-204ENST00000508930 TTC21BQ7Z4L5 1316 aa16.92■□□□□ 0.3
TRIM41-204ENST00000508930 DLG5Q8TDM6 1919 aa16.92■□□□□ 0.3
TRIM41-204ENST00000508930 HSP90B1P14625 803 aaKnown RBP16.91■□□□□ 0.3
TRIM41-204ENST00000508930 SYCP1Q15431 976 aa16.91■□□□□ 0.3
TRIM41-204ENST00000508930 LTV1Q96GA3 475 aaPredicted RBP16.91■□□□□ 0.3
TRIM41-204ENST00000508930 RBM8AQ9Y5S9 174 aaKnown RBP16.91■□□□□ 0.3
TRIM41-204ENST00000508930 FOSBP53539 338 aa16.91■□□□□ 0.3
TRIM41-204ENST00000508930 RNF20Q5VTR2 975 aa16.91■□□□□ 0.3
TRIM41-204ENST00000508930 KLHL34Q8N239 644 aa16.91■□□□□ 0.3
TRIM41-204ENST00000508930 ZNF397Q8NF99 534 aaPredicted RBP16.91■□□□□ 0.3
TRIM41-204ENST00000508930 ZRSR1Q15695 479 aaKnown RBP16.91■□□□□ 0.3
TRIM41-204ENST00000508930 CLSTN2Q9H4D0 955 aa16.91■□□□□ 0.3
TRIM41-204ENST00000508930 PHAXQ9H814 394 aaKnown RBP16.9■□□□□ 0.3
TRIM41-204ENST00000508930 ZSWIM6Q9HCJ5 1215 aa16.9■□□□□ 0.3
TRIM41-204ENST00000508930 SKILP12757 684 aa16.9■□□□□ 0.3
TRIM41-204ENST00000508930 TPCN1Q9ULQ1 816 aa16.9■□□□□ 0.3
TRIM41-204ENST00000508930 CRB1P82279 1406 aa16.9■□□□□ 0.3
TRIM41-204ENST00000508930 ALKQ9UM73 1620 aa16.9■□□□□ 0.3
TRIM41-204ENST00000508930 CCDC171Q6TFL3 1326 aa16.9■□□□□ 0.3
TRIM41-204ENST00000508930 PDIA4P13667 645 aaKnown RBP16.9■□□□□ 0.3
TRIM41-204ENST00000508930 ZNF215Q9UL58 517 aaPredicted RBP16.9■□□□□ 0.3
TRIM41-204ENST00000508930 TAF7Q15545 349 aaPredicted RBP16.89■□□□□ 0.29
TRIM41-204ENST00000508930 LARP1Q6PKG0 1096 aaKnown RBP16.89■□□□□ 0.29
TRIM41-204ENST00000508930 LEO1Q8WVC0 666 aaPredicted RBP16.89■□□□□ 0.29
TRIM41-204ENST00000508930 ECHDC1Q9NTX5 307 aa16.89■□□□□ 0.29
TRIM41-204ENST00000508930 CREB3L3Q68CJ9 461 aa16.89■□□□□ 0.29
TRIM41-204ENST00000508930 TDRD7Q8NHU6 1098 aaKnown RBP16.89■□□□□ 0.29
TRIM41-204ENST00000508930 KIF18AQ8NI77 898 aa16.89■□□□□ 0.29
TRIM41-204ENST00000508930 GNAT3A8MTJ3 354 aa16.89■□□□□ 0.29
TRIM41-204ENST00000508930 NR1I2O75469 434 aa16.89■□□□□ 0.29
TRIM41-204ENST00000508930 ANKRD1Q15327 319 aa16.89■□□□□ 0.29
TRIM41-204ENST00000508930 TM6SF1Q9BZW5 370 aa16.89■□□□□ 0.29
TRIM41-204ENST00000508930 C9orf78Q9NZ63 289 aaPredicted RBP16.88■□□□□ 0.29
TRIM41-204ENST00000508930 AACSQ86V21 672 aa16.88■□□□□ 0.29
TRIM41-204ENST00000508930 NAP1L2Q9ULW6 460 aaPredicted RBP16.88■□□□□ 0.29
TRIM41-204ENST00000508930 CPS1P31327 1500 aa16.87■□□□□ 0.29
TRIM41-204ENST00000508930 NBPF7P0C2Y1 421 aaPredicted RBP16.87■□□□□ 0.29
TRIM41-204ENST00000508930 CCDC144BQ3MJ40 725 aa16.87■□□□□ 0.29
TRIM41-204ENST00000508930 PLA2G4DQ86XP0 818 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms