RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 ARHGAP33O14559 1287 aa5.26□□□□□ -1.57
CNOT4-202ENST00000356162 PRIM1P49642 420 aaKnown RBP5.26□□□□□ -1.57
CNOT4-202ENST00000356162 MAP3K9P80192 1104 aa5.26□□□□□ -1.57
CNOT4-202ENST00000356162 EN1Q05925 392 aaPredicted RBP5.26□□□□□ -1.57
CNOT4-202ENST00000356162 SMARCC1Q92922 1105 aaPredicted RBP5.26□□□□□ -1.57
CNOT4-202ENST00000356162 TMOD3Q9NYL9 352 aa5.26□□□□□ -1.57
CNOT4-202ENST00000356162 CEMIPQ8WUJ3 1361 aa5.26□□□□□ -1.57
CNOT4-202ENST00000356162 PALLDQ8WX93 1383 aa5.26□□□□□ -1.57
CNOT4-202ENST00000356162 C4BP0C0L5 1744 aa5.26□□□□□ -1.57
CNOT4-202ENST00000356162 RNMTO43148 476 aaKnown RBP5.26□□□□□ -1.57
CNOT4-202ENST00000356162 EZH2Q15910 746 aaKnown RBP5.26□□□□□ -1.57
CNOT4-202ENST00000356162 PTF1AQ7RTS3 328 aa5.26□□□□□ -1.57
CNOT4-202ENST00000356162 SYTL4Q96C24 671 aaPredicted RBP5.26□□□□□ -1.57
CNOT4-202ENST00000356162 PLEKHF1Q96S99 279 aa5.26□□□□□ -1.57
CNOT4-202ENST00000356162 KCPQ6ZWJ8 1503 aa5.26□□□□□ -1.57
CNOT4-202ENST00000356162 GNAT3A8MTJ3 354 aa5.25□□□□□ -1.57
CNOT4-202ENST00000356162 HTATSF1O43719 755 aaKnown RBP5.25□□□□□ -1.57
CNOT4-202ENST00000356162 HMGB2P26583 209 aaKnown RBP5.25□□□□□ -1.57
CNOT4-202ENST00000356162 PTGER2P43116 358 aa5.25□□□□□ -1.57
CNOT4-202ENST00000356162 FOSBP53539 338 aa5.25□□□□□ -1.57
CNOT4-202ENST00000356162 NFE2L2Q16236 605 aa5.25□□□□□ -1.57
CNOT4-202ENST00000356162 SLC27A3Q5K4L6 730 aa5.25□□□□□ -1.57
CNOT4-202ENST00000356162 LAMB4A4D0S4 1761 aa5.25□□□□□ -1.57
CNOT4-202ENST00000356162 LRP5O75197 1615 aa5.25□□□□□ -1.57
CNOT4-202ENST00000356162 CABP4P57796 275 aa5.25□□□□□ -1.57
CNOT4-202ENST00000356162 TXNRD1Q16881 649 aa5.25□□□□□ -1.57
CNOT4-202ENST00000356162 ZNF454Q8N9F8 522 aa5.25□□□□□ -1.57
CNOT4-202ENST00000356162 PIGBQ92521 554 aa5.25□□□□□ -1.57
CNOT4-202ENST00000356162 PHACTR3Q96KR7 559 aa5.25□□□□□ -1.57
CNOT4-202ENST00000356162 LMOD3Q0VAK6 560 aa5.24□□□□□ -1.57
CNOT4-202ENST00000356162 MPRIPQ6WCQ1 1025 aa5.24□□□□□ -1.57
CNOT4-202ENST00000356162 RUNDC1Q96C34 613 aa5.24□□□□□ -1.57
CNOT4-202ENST00000356162 SLC52A2Q9HAB3 445 aa5.24□□□□□ -1.57
CNOT4-202ENST00000356162 MRS2Q9HD23 443 aa5.24□□□□□ -1.57
CNOT4-202ENST00000356162 UBR3Q6ZT12 1888 aa5.24□□□□□ -1.57
CNOT4-202ENST00000356162 PSEN2P49810 448 aa5.24□□□□□ -1.57
CNOT4-202ENST00000356162 COL24A1Q17RW2 1714 aa5.24□□□□□ -1.57
CNOT4-202ENST00000356162 EP400Q96L91 3159 aa5.24□□□□□ -1.57
CNOT4-202ENST00000356162 NBPF14Q5TI25 921 aa5.23□□□□□ -1.57
CNOT4-202ENST00000356162 DMRTA1Q5VZB9 504 aa5.23□□□□□ -1.57
CNOT4-202ENST00000356162 RTF1Q92541 710 aaKnown RBP5.23□□□□□ -1.57
CNOT4-202ENST00000356162 CCNL1Q9UK58 526 aaPredicted RBP5.23□□□□□ -1.57
CNOT4-202ENST00000356162 CCER2I3L3R5 266 aa5.23□□□□□ -1.57
CNOT4-202ENST00000356162 TEFQ10587 303 aa5.23□□□□□ -1.57
CNOT4-202ENST00000356162 RNF166Q96A37 237 aaPredicted RBP5.23□□□□□ -1.57
CNOT4-202ENST00000356162 BCL2L12Q9HB09 334 aa5.23□□□□□ -1.57
CNOT4-202ENST00000356162 LGR6Q9HBX8 967 aa5.23□□□□□ -1.57
CNOT4-202ENST00000356162 ATG3Q9NT62 314 aa5.23□□□□□ -1.57
CNOT4-202ENST00000356162 STK32BQ9NY57 414 aa5.23□□□□□ -1.57
CNOT4-202ENST00000356162 ADAMTS8Q9UP79 889 aa5.23□□□□□ -1.57
CNOT4-202ENST00000356162 LOC102724428A0A0B4J2F2 783 aa5.22□□□□□ -1.57
CNOT4-202ENST00000356162 DPYSL4O14531 572 aa5.22□□□□□ -1.57
CNOT4-202ENST00000356162 TMPOP42166 694 aaKnown RBP5.22□□□□□ -1.57
CNOT4-202ENST00000356162 SIK1P57059 783 aa5.22□□□□□ -1.57
CNOT4-202ENST00000356162 CCDC184Q52MB2 194 aa5.22□□□□□ -1.57
CNOT4-202ENST00000356162 ADGRD1Q6QNK2 874 aa5.22□□□□□ -1.57
CNOT4-202ENST00000356162 CCDC146Q8IYE0 955 aa5.22□□□□□ -1.57
CNOT4-202ENST00000356162 IL17REQ8NFR9 667 aa5.22□□□□□ -1.57
CNOT4-202ENST00000356162 KCNK17Q96T54 332 aa5.22□□□□□ -1.57
CNOT4-202ENST00000356162 ASAP1Q9ULH1 1129 aa5.22□□□□□ -1.57
CNOT4-202ENST00000356162 C4AP0C0L4 1744 aa5.22□□□□□ -1.57
CNOT4-202ENST00000356162 TK2O00142 265 aa5.22□□□□□ -1.57
CNOT4-202ENST00000356162 PNISRQ8TF01 805 aaKnown RBP5.22□□□□□ -1.57
CNOT4-202ENST00000356162 LRRC4BQ9NT99 713 aa5.22□□□□□ -1.57
CNOT4-202ENST00000356162 CNTNAP4Q9C0A0 1308 aa5.22□□□□□ -1.57
CNOT4-202ENST00000356162 SLC15A2Q16348 729 aa5.21□□□□□ -1.57
CNOT4-202ENST00000356162 ZNF827Q17R98 1081 aa5.21□□□□□ -1.57
CNOT4-202ENST00000356162 NFATC2IPQ8NCF5 419 aa5.21□□□□□ -1.57
CNOT4-202ENST00000356162 ZDHHC16Q969W1 377 aa5.21□□□□□ -1.57
CNOT4-202ENST00000356162 SCN7AQ01118 1682 aa5.21□□□□□ -1.57
CNOT4-202ENST00000356162 HEG1Q9ULI3 1381 aa5.21□□□□□ -1.58
CNOT4-202ENST00000356162 RIPK4P57078 832 aa5.21□□□□□ -1.58
CNOT4-202ENST00000356162 DIEXFQ68CQ4 756 aaKnown RBP5.21□□□□□ -1.58
CNOT4-202ENST00000356162 MCM10Q7L590 875 aa5.21□□□□□ -1.58
CNOT4-202ENST00000356162 TTC5Q8N0Z6 440 aa5.21□□□□□ -1.58
CNOT4-202ENST00000356162 VSIG10Q8N0Z9 540 aa5.21□□□□□ -1.58
CNOT4-202ENST00000356162 ADAM33Q9BZ11 813 aa5.21□□□□□ -1.58
CNOT4-202ENST00000356162 BABAM1Q9NWV8 329 aa5.21□□□□□ -1.58
CNOT4-202ENST00000356162 BCORQ6W2J9 1755 aa5.21□□□□□ -1.58
CNOT4-202ENST00000356162 BTBD11A6QL63 1104 aa5.2□□□□□ -1.58
CNOT4-202ENST00000356162 ATP6V1AP38606 617 aa5.2□□□□□ -1.58
CNOT4-202ENST00000356162 ITPK1Q13572 414 aa5.2□□□□□ -1.58
CNOT4-202ENST00000356162 R3HDM1Q15032 1099 aaKnown RBP5.2□□□□□ -1.58
CNOT4-202ENST00000356162 LINC00116Q8NCU8 138 aa5.2□□□□□ -1.58
CNOT4-202ENST00000356162 AK7Q96M32 723 aa5.2□□□□□ -1.58
CNOT4-202ENST00000356162 PCDHGA10Q9Y5H3 936 aa5.2□□□□□ -1.58
CNOT4-202ENST00000356162 MYH14Q7Z406 1995 aaKnown RBP5.2□□□□□ -1.58
CNOT4-202ENST00000356162 HRO43593 1189 aa5.2□□□□□ -1.58
CNOT4-202ENST00000356162 CALD1Q05682 793 aaKnown RBP5.2□□□□□ -1.58
CNOT4-202ENST00000356162 DCTN1Q14203 1278 aa5.2□□□□□ -1.58
CNOT4-202ENST00000356162 TAF7Q15545 349 aaPredicted RBP5.2□□□□□ -1.58
CNOT4-202ENST00000356162 E2F4Q16254 413 aa5.2□□□□□ -1.58
CNOT4-202ENST00000356162 RC3H1Q5TC82 1133 aaKnown RBP5.2□□□□□ -1.58
CNOT4-202ENST00000356162 ZNF790Q6PG37 636 aa5.2□□□□□ -1.58
CNOT4-202ENST00000356162 NGEFQ8N5V2 710 aa5.2□□□□□ -1.58
CNOT4-202ENST00000356162 FMNL2Q96PY5 1086 aa5.2□□□□□ -1.58
CNOT4-202ENST00000356162 SLC4A9Q96Q91 983 aa5.2□□□□□ -1.58
CNOT4-202ENST00000356162 APAF1O14727 1248 aa5.19□□□□□ -1.58
CNOT4-202ENST00000356162 PHF14O94880 888 aa5.19□□□□□ -1.58
CNOT4-202ENST00000356162 PTPREP23469 700 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms