RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 GSTO1P78417 241 aa5.03□□□□□ -1.6
CFTR-201ENST00000003084 IMMTQ16891 758 aaKnown RBP5.03□□□□□ -1.6
CFTR-201ENST00000003084 EP400NLQ6ZTU2 488 aa5.03□□□□□ -1.6
CFTR-201ENST00000003084 NYXQ9GZU5 481 aa5.03□□□□□ -1.6
CFTR-201ENST00000003084 ZNF232Q9UNY5 417 aa5.03□□□□□ -1.6
CFTR-201ENST00000003084 PCDH11XQ9BZA7 1347 aa5.03□□□□□ -1.6
CFTR-201ENST00000003084 PCDH11YQ9BZA8 1340 aa5.03□□□□□ -1.6
CFTR-201ENST00000003084 FKBP4Q02790 459 aaKnown RBP eCLIP5.03□□□□□ -1.61
CFTR-201ENST00000003084 GOLGA6L1Q8N7Z2 621 aa5.03□□□□□ -1.61
CFTR-201ENST00000003084 PLXNC1O60486 1568 aa5.02□□□□□ -1.61
CFTR-201ENST00000003084 NBPF14Q5TI25 921 aa5.02□□□□□ -1.61
CFTR-201ENST00000003084 DDX46Q7L014 1031 aaKnown RBP5.02□□□□□ -1.61
CFTR-201ENST00000003084 SULF1Q8IWU6 871 aa5.02□□□□□ -1.61
CFTR-201ENST00000003084 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.02□□□□□ -1.61
CFTR-201ENST00000003084 FANCIQ9NVI1 1328 aa5.02□□□□□ -1.61
CFTR-201ENST00000003084 PIK3C2GO75747 1445 aa5.02□□□□□ -1.61
CFTR-201ENST00000003084 NBPF26B4DH59 902 aa5.02□□□□□ -1.61
CFTR-201ENST00000003084 PTCD1O75127 700 aaKnown RBP5.02□□□□□ -1.61
CFTR-201ENST00000003084 MAP3K12Q12852 859 aa5.02□□□□□ -1.61
CFTR-201ENST00000003084 FOXC1Q12948 553 aa5.02□□□□□ -1.61
CFTR-201ENST00000003084 PPP1R14AQ96A00 147 aa5.02□□□□□ -1.61
CFTR-201ENST00000003084 UBAC1Q9BSL1 405 aa5.02□□□□□ -1.61
CFTR-201ENST00000003084 CHD1O14646 1710 aa5.02□□□□□ -1.61
CFTR-201ENST00000003084 GLRX3O76003 335 aaKnown RBP5.02□□□□□ -1.61
CFTR-201ENST00000003084 LDHCP07864 332 aa5.02□□□□□ -1.61
CFTR-201ENST00000003084 DHX8Q14562 1220 aaKnown RBP5.02□□□□□ -1.61
CFTR-201ENST00000003084 DDB1Q16531 1140 aa5.02□□□□□ -1.61
CFTR-201ENST00000003084 CCDC152Q4G0S7 254 aa5.02□□□□□ -1.61
CFTR-201ENST00000003084 A0A0U1RQG5 324 aaPredicted RBP5.02□□□□□ -1.61
CFTR-201ENST00000003084 ZSCAN29Q8IWY8 852 aaPredicted RBP5.02□□□□□ -1.61
CFTR-201ENST00000003084 KCTD12Q96CX2 325 aaKnown RBP5.02□□□□□ -1.61
CFTR-201ENST00000003084 MYCP01106 439 aaPredicted RBP5.01□□□□□ -1.61
CFTR-201ENST00000003084 EPS15P42566 896 aa5.01□□□□□ -1.61
CFTR-201ENST00000003084 USP5P45974 858 aa5.01□□□□□ -1.61
CFTR-201ENST00000003084 DZIP3Q86Y13 1208 aaKnown RBP5.01□□□□□ -1.61
CFTR-201ENST00000003084 MS4A3Q96HJ5 214 aa5.01□□□□□ -1.61
CFTR-201ENST00000003084 EHMT1Q9H9B1 1298 aa5.01□□□□□ -1.61
CFTR-201ENST00000003084 DACH1Q9UI36 760 aa5.01□□□□□ -1.61
CFTR-201ENST00000003084 ATP2B2Q01814 1243 aa5.01□□□□□ -1.61
CFTR-201ENST00000003084 MKRN4PQ13434 485 aaPredicted RBP5.01□□□□□ -1.61
CFTR-201ENST00000003084 TMEM57Q8N5G2 664 aa5.01□□□□□ -1.61
CFTR-201ENST00000003084 ZCCHC11Q5TAX3 1644 aaKnown RBP5.01□□□□□ -1.61
CFTR-201ENST00000003084 POLR3AO14802 1390 aaPredicted RBP5.01□□□□□ -1.61
CFTR-201ENST00000003084 UQCRFS1P1P0C7P4 283 aa5.01□□□□□ -1.61
CFTR-201ENST00000003084 DZIP1Q86YF9 867 aaKnown RBP5.01□□□□□ -1.61
CFTR-201ENST00000003084 PDRG1Q9NUG6 133 aa5.01□□□□□ -1.61
CFTR-201ENST00000003084 MIS18AQ9NYP9 233 aa5.01□□□□□ -1.61
CFTR-201ENST00000003084 POLR3DP05423 398 aaPredicted RBP5.01□□□□□ -1.61
CFTR-201ENST00000003084 HMGB1P09429 215 aaKnown RBP5.01□□□□□ -1.61
CFTR-201ENST00000003084 ATP6V1AP38606 617 aa5.01□□□□□ -1.61
CFTR-201ENST00000003084 RARSP54136 660 aaKnown RBP5.01□□□□□ -1.61
CFTR-201ENST00000003084 TMEM132AQ24JP5 1023 aa5.01□□□□□ -1.61
CFTR-201ENST00000003084 ARHGAP45Q92619 1136 aa5.01□□□□□ -1.61
CFTR-201ENST00000003084 C8orf37Q96NL8 207 aa5.01□□□□□ -1.61
CFTR-201ENST00000003084 RNF41Q9H4P4 317 aaPredicted RBP5.01□□□□□ -1.61
CFTR-201ENST00000003084 BABAM1Q9NWV8 329 aa5.01□□□□□ -1.61
CFTR-201ENST00000003084 MAP3K2Q9Y2U5 619 aa5.01□□□□□ -1.61
CFTR-201ENST00000003084 EDC4Q6P2E9 1401 aaKnown RBP5.01□□□□□ -1.61
CFTR-201ENST00000003084 TMEM2Q9UHN6 1383 aa5.01□□□□□ -1.61
CFTR-201ENST00000003084 PTPREP23469 700 aa5.01□□□□□ -1.61
CFTR-201ENST00000003084 POLD1P28340 1107 aa5.01□□□□□ -1.61
CFTR-201ENST00000003084 DEKP35659 375 aaKnown RBP5.01□□□□□ -1.61
CFTR-201ENST00000003084 TNIP1Q15025 636 aa5.01□□□□□ -1.61
CFTR-201ENST00000003084 CCDC178Q5BJE1 867 aa5.01□□□□□ -1.61
CFTR-201ENST00000003084 ZGPATQ8N5A5 531 aaKnown RBP5.01□□□□□ -1.61
CFTR-201ENST00000003084 LRCH3Q96II8 777 aa5.01□□□□□ -1.61
CFTR-201ENST00000003084 MAGEC2Q9UBF1 373 aaPredicted RBP5.01□□□□□ -1.61
CFTR-201ENST00000003084 PLEKHH1Q9ULM0 1364 aa5.01□□□□□ -1.61
CFTR-201ENST00000003084 KRT18P05783 430 aaKnown RBP5□□□□□ -1.61
CFTR-201ENST00000003084 MX1P20591 662 aa5□□□□□ -1.61
CFTR-201ENST00000003084 CRACR2BQ8N4Y2 399 aaPredicted RBP5□□□□□ -1.61
CFTR-201ENST00000003084 IP6K1Q92551 441 aa5□□□□□ -1.61
CFTR-201ENST00000003084 CEP131Q9UPN4 1083 aa5□□□□□ -1.61
CFTR-201ENST00000003084 PZPP20742 1482 aa5□□□□□ -1.61
CFTR-201ENST00000003084 COL17A1Q9UMD9 1497 aaPredicted RBP5□□□□□ -1.61
CFTR-201ENST00000003084 GCC2Q8IWJ2 1684 aa5□□□□□ -1.61
CFTR-201ENST00000003084 MAP3K5Q99683 1374 aa5□□□□□ -1.61
CFTR-201ENST00000003084 FOSBP53539 338 aa5□□□□□ -1.61
CFTR-201ENST00000003084 FLIIQ13045 1269 aa5□□□□□ -1.61
CFTR-201ENST00000003084 HS6ST3Q8IZP7 471 aa5□□□□□ -1.61
CFTR-201ENST00000003084 RRAGCQ9HB90 399 aa5□□□□□ -1.61
CFTR-201ENST00000003084 MPHOSPH10O00566 681 aaKnown RBP5□□□□□ -1.61
CFTR-201ENST00000003084 ALDH1L1O75891 902 aa5□□□□□ -1.61
CFTR-201ENST00000003084 CHRNA2Q15822 529 aa5□□□□□ -1.61
CFTR-201ENST00000003084 BLOC1S2Q6QNY1 142 aa5□□□□□ -1.61
CFTR-201ENST00000003084 DCAF5Q96JK2 942 aa5□□□□□ -1.61
CFTR-201ENST00000003084 FAM13BQ9NYF5 915 aa5□□□□□ -1.61
CFTR-201ENST00000003084 HECW2Q9P2P5 1572 aa5□□□□□ -1.61
CFTR-201ENST00000003084 IDH1O75874 414 aaKnown RBP5□□□□□ -1.61
CFTR-201ENST00000003084 MBD3O95983 291 aa5□□□□□ -1.61
CFTR-201ENST00000003084 NEK4P51957 841 aa5□□□□□ -1.61
CFTR-201ENST00000003084 DNAI2Q9GZS0 605 aa5□□□□□ -1.61
CFTR-201ENST00000003084 SEC63Q9UGP8 760 aaKnown RBP5□□□□□ -1.61
CFTR-201ENST00000003084 BAG3O95817 575 aa5□□□□□ -1.61
CFTR-201ENST00000003084 DCTN1Q14203 1278 aa5□□□□□ -1.61
CFTR-201ENST00000003084 STK38Q15208 465 aa5□□□□□ -1.61
CFTR-201ENST00000003084 OXLD1Q5BKU9 147 aa5□□□□□ -1.61
CFTR-201ENST00000003084 NBPF6Q5VWK0 638 aa5□□□□□ -1.61
CFTR-201ENST00000003084 NBPF5PQ86XG9 351 aaPredicted RBP5□□□□□ -1.61
CFTR-201ENST00000003084 NBPF4Q96M43 638 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms