RNA–Protein interactions for RNA: ENSMUST00000221041.1

Trim9-205, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 3,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-205ENSMUST00000221041 Ddit3P35639 168 aa12.56□□□□□ -0.4
Trim9-205ENSMUST00000221041 Mum1Q6DID5 682 aa12.56□□□□□ -0.4
Trim9-205ENSMUST00000221041 GptQ8QZR5 496 aa12.56□□□□□ -0.4
Trim9-205ENSMUST00000221041 Glipr1l2Q9CQ35 332 aa12.56□□□□□ -0.4
Trim9-205ENSMUST00000221041 Fam84aQ9D650 292 aa12.56□□□□□ -0.4
Trim9-205ENSMUST00000221041 AdgbG3UZ78 1657 aa12.56□□□□□ -0.4
Trim9-205ENSMUST00000221041 Becn1O88597 448 aa12.56□□□□□ -0.4
Trim9-205ENSMUST00000221041 Larp1Q6ZQ58 1072 aaKnown RBP12.56□□□□□ -0.4
Trim9-205ENSMUST00000221041 Phkg2Q9DB30 406 aa12.56□□□□□ -0.4
Trim9-205ENSMUST00000221041 Gm45015A0A140LII9 184 aa12.56□□□□□ -0.4
Trim9-205ENSMUST00000221041 Gm18336A0A140LIU8 765 aa12.56□□□□□ -0.4
Trim9-205ENSMUST00000221041 Anapc15P60007 132 aa12.56□□□□□ -0.4
Trim9-205ENSMUST00000221041 Asic4Q7TNS7 539 aa12.56□□□□□ -0.4
Trim9-205ENSMUST00000221041 Tti2Q8BGV4 512 aa12.56□□□□□ -0.4
Trim9-205ENSMUST00000221041 Ptcd1Q8C2E4 695 aaKnown RBP12.56□□□□□ -0.4
Trim9-205ENSMUST00000221041 Lmbrd2Q8C561 694 aa12.56□□□□□ -0.4
Trim9-205ENSMUST00000221041 Rbbp8nlA2ABX0 614 aa12.55□□□□□ -0.4
Trim9-205ENSMUST00000221041 Zbtb21E9Q444 1094 aa12.55□□□□□ -0.4
Trim9-205ENSMUST00000221041 Myd88P22366 296 aa12.55□□□□□ -0.4
Trim9-205ENSMUST00000221041 Nkx2-3P97334 362 aa12.55□□□□□ -0.4
Trim9-205ENSMUST00000221041 Gigyf1Q99MR1 1044 aaKnown RBP12.55□□□□□ -0.4
Trim9-205ENSMUST00000221041 PhaxQ9JJT9 385 aaKnown RBP12.55□□□□□ -0.4
Trim9-205ENSMUST00000221041 Gemin5Q8BX17 1502 aaKnown RBP12.55□□□□□ -0.4
Trim9-205ENSMUST00000221041 Syt1P46096 421 aa12.55□□□□□ -0.4
Trim9-205ENSMUST00000221041 Ak2Q9WTP6 239 aa12.55□□□□□ -0.4
Trim9-205ENSMUST00000221041 Fam170aQ66LM6 333 aa12.54□□□□□ -0.4
Trim9-205ENSMUST00000221041 Spty2d1Q68FG3 682 aa12.54□□□□□ -0.4
Trim9-205ENSMUST00000221041 R3hcc1Q8BSI6 488 aa12.54□□□□□ -0.4
Trim9-205ENSMUST00000221041 Rcan3Q9JKK0 239 aa12.54□□□□□ -0.4
Trim9-205ENSMUST00000221041 Abca14E9Q8F8 1683 aa12.54□□□□□ -0.4
Trim9-205ENSMUST00000221041 Gm9992B2RWK3 458 aa12.54□□□□□ -0.4
Trim9-205ENSMUST00000221041 Znf326O88291 580 aa12.54□□□□□ -0.4
Trim9-205ENSMUST00000221041 Unc93aQ710D3 458 aa12.54□□□□□ -0.4
Trim9-205ENSMUST00000221041 NaspQ99MD9 773 aaKnown RBP12.54□□□□□ -0.4
Trim9-205ENSMUST00000221041 ScaperF8VQ70 1398 aaKnown RBP12.54□□□□□ -0.4
Trim9-205ENSMUST00000221041 Ncoa4Q5U4H9 625 aa12.53□□□□□ -0.4
Trim9-205ENSMUST00000221041 Chd1lQ9CXF7 900 aa12.53□□□□□ -0.4
Trim9-205ENSMUST00000221041 Cdk12Q14AX6 1484 aaKnown RBP12.53□□□□□ -0.4
Trim9-205ENSMUST00000221041 Zdhhc9P59268 364 aa12.53□□□□□ -0.4
Trim9-205ENSMUST00000221041 Utp18Q5SSI6 552 aaKnown RBP12.53□□□□□ -0.4
Trim9-205ENSMUST00000221041 Fsd1Q7TPM6 496 aa12.53□□□□□ -0.4
Trim9-205ENSMUST00000221041 Ppp1r37Q8BKR5 712 aa12.53□□□□□ -0.4
Trim9-205ENSMUST00000221041 Hecw2Q6I6G8 1578 aa12.53□□□□□ -0.4
Trim9-205ENSMUST00000221041 Ccnl1Q52KE7 532 aaKnown RBP12.53□□□□□ -0.4
Trim9-205ENSMUST00000221041 Arhgef28P97433 1693 aa12.52□□□□□ -0.4
Trim9-205ENSMUST00000221041 CemipQ8BI06 1361 aa12.52□□□□□ -0.41
Trim9-205ENSMUST00000221041 Dnajc2P54103 621 aaKnown RBP12.52□□□□□ -0.41
Trim9-205ENSMUST00000221041 Gnat3Q3V3I2 354 aa12.52□□□□□ -0.41
Trim9-205ENSMUST00000221041 Igsf1Q7TQA1 1317 aa12.52□□□□□ -0.41
Trim9-205ENSMUST00000221041 Vwa3bJ9JI28 736 aa12.52□□□□□ -0.41
Trim9-205ENSMUST00000221041 Abl1P00520 1123 aa12.52□□□□□ -0.41
Trim9-205ENSMUST00000221041 Anxa1P10107 346 aaKnown RBP12.52□□□□□ -0.41
Trim9-205ENSMUST00000221041 Ccdc178Q8CDV0 866 aa12.52□□□□□ -0.41
Trim9-205ENSMUST00000221041 Pms1Q8K119 917 aa12.52□□□□□ -0.41
Trim9-205ENSMUST00000221041 Mctp1E9PV86 951 aa12.51□□□□□ -0.41
Trim9-205ENSMUST00000221041 Isy1Q69ZQ2 285 aaKnown RBP12.51□□□□□ -0.41
Trim9-205ENSMUST00000221041 Smim5Q8BT42 78 aa12.51□□□□□ -0.41
Trim9-205ENSMUST00000221041 Rufy3Q9D394 469 aa12.51□□□□□ -0.41
Trim9-205ENSMUST00000221041 NktrP30415 1453 aa12.51□□□□□ -0.41
Trim9-205ENSMUST00000221041 Dip2bQ3UH60 1574 aa12.51□□□□□ -0.41
Trim9-205ENSMUST00000221041 Parp14Q2EMV9 1817 aa12.51□□□□□ -0.41
Trim9-205ENSMUST00000221041 Igfbp6P47880 238 aa12.51□□□□□ -0.41
Trim9-205ENSMUST00000221041 Ankle2Q6P1H6 964 aa12.51□□□□□ -0.41
Trim9-205ENSMUST00000221041 Tmem67Q8BR76 992 aa12.51□□□□□ -0.41
Trim9-205ENSMUST00000221041 Nup88Q8CEC0 753 aaKnown RBP12.51□□□□□ -0.41
Trim9-205ENSMUST00000221041 Pus3Q9JI38 481 aa12.51□□□□□ -0.41
Trim9-205ENSMUST00000221041 Pank2Q3U4S0 443 aa12.51□□□□□ -0.41
Trim9-205ENSMUST00000221041 Ddx19aQ61655 478 aaKnown RBP12.51□□□□□ -0.41
Trim9-205ENSMUST00000221041 IbspQ61711 324 aa12.51□□□□□ -0.41
Trim9-205ENSMUST00000221041 Ano8Q6PB70 1060 aa12.51□□□□□ -0.41
Trim9-205ENSMUST00000221041 Ddx58Q6Q899 926 aa12.51□□□□□ -0.41
Trim9-205ENSMUST00000221041 Taf5lQ91WQ5 589 aa12.51□□□□□ -0.41
Trim9-205ENSMUST00000221041 BccipQ9CWI3 316 aa12.51□□□□□ -0.41
Trim9-205ENSMUST00000221041 Rad50P70388 1312 aa12.51□□□□□ -0.41
Trim9-205ENSMUST00000221041 Ncapd2Q8K2Z4 1392 aa12.5□□□□□ -0.41
Trim9-205ENSMUST00000221041 Plekhd1B2RPU2 505 aa12.5□□□□□ -0.41
Trim9-205ENSMUST00000221041 Ugt1a5B2RT14 529 aa12.5□□□□□ -0.41
Trim9-205ENSMUST00000221041 RgmbQ7TQ33 436 aa12.5□□□□□ -0.41
Trim9-205ENSMUST00000221041 Rhot2Q8JZN7 620 aa12.5□□□□□ -0.41
Trim9-205ENSMUST00000221041 Atf7Q8R0S1 413 aa12.5□□□□□ -0.41
Trim9-205ENSMUST00000221041 Pdlim2Q8R1G6 349 aa12.5□□□□□ -0.41
Trim9-205ENSMUST00000221041 Adamts7Q68SA9 1657 aa12.5□□□□□ -0.41
Trim9-205ENSMUST00000221041 Pkp1P97350 728 aaKnown RBP12.5□□□□□ -0.41
Trim9-205ENSMUST00000221041 Rab3gap1Q80UJ7 981 aa12.5□□□□□ -0.41
Trim9-205ENSMUST00000221041 Rbm17Q8JZX4 405 aaKnown RBP12.5□□□□□ -0.41
Trim9-205ENSMUST00000221041 Wdr78E9PYY5 807 aa12.49□□□□□ -0.41
Trim9-205ENSMUST00000221041 Atg3Q9CPX6 314 aa12.49□□□□□ -0.41
Trim9-205ENSMUST00000221041 ZwintQ9CQU5 252 aa12.49□□□□□ -0.41
Trim9-205ENSMUST00000221041 Nip7Q9CXK8 180 aaKnown RBP12.49□□□□□ -0.41
Trim9-205ENSMUST00000221041 Col1a2Q01149 1372 aa12.49□□□□□ -0.41
Trim9-205ENSMUST00000221041 Kdm4aQ8BW72 1064 aa12.49□□□□□ -0.41
Trim9-205ENSMUST00000221041 Noc3lQ8VI84 807 aaKnown RBP12.49□□□□□ -0.41
Trim9-205ENSMUST00000221041 Cwc25Q9DBF7 416 aa12.49□□□□□ -0.41
Trim9-205ENSMUST00000221041 Chd4Q6PDQ2 1915 aaKnown RBP12.49□□□□□ -0.41
Trim9-205ENSMUST00000221041 Snx13Q6PHS6 957 aa12.49□□□□□ -0.41
Trim9-205ENSMUST00000221041 Dis3l2Q8CI75 870 aaKnown RBP12.49□□□□□ -0.41
Trim9-205ENSMUST00000221041 Cep57l1Q8VDS7 400 aa12.49□□□□□ -0.41
Trim9-205ENSMUST00000221041 Lrrfip2Q91WK0 415 aa12.49□□□□□ -0.41
Trim9-205ENSMUST00000221041 CrcpO35427 148 aa12.48□□□□□ -0.41
Trim9-205ENSMUST00000221041 Pdia4P08003 638 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 46.7 ms