RNA–Protein interactions for RNA: ENSMUST00000063588.10

Vamp1-202, Transcript of Vesicle-associated membrane protein 1, mousemouse

TSL 2 BASIC

Gene Vamp1, Length 1,400 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-202ENSMUST00000063588 Bcl2l12Q9D3J3 255 aa13.84□□□□□ -0.19
Vamp1-202ENSMUST00000063588 Vps33bP59016 617 aa13.83□□□□□ -0.2
Vamp1-202ENSMUST00000063588 Ccnl1Q52KE7 532 aaKnown RBP13.83□□□□□ -0.2
Vamp1-202ENSMUST00000063588 Gm12185Q5NCB2 835 aa13.83□□□□□ -0.2
Vamp1-202ENSMUST00000063588 Tmem87bQ8BKU8 555 aa13.83□□□□□ -0.2
Vamp1-202ENSMUST00000063588 ApobrQ8VBT6 942 aa13.83□□□□□ -0.2
Vamp1-202ENSMUST00000063588 Ehd4Q9EQP2 541 aa13.83□□□□□ -0.2
Vamp1-202ENSMUST00000063588 Syde2E9PUP1 1314 aa13.83□□□□□ -0.2
Vamp1-202ENSMUST00000063588 InsrrQ9WTL4 1300 aa13.83□□□□□ -0.2
Vamp1-202ENSMUST00000063588 Col4a1P02463 1669 aa13.83□□□□□ -0.2
Vamp1-202ENSMUST00000063588 Tpx2A2APB8 745 aaKnown RBP13.82□□□□□ -0.2
Vamp1-202ENSMUST00000063588 Qtrt2B8ZXI1 415 aa13.82□□□□□ -0.2
Vamp1-202ENSMUST00000063588 Terf2O35144 541 aa13.82□□□□□ -0.2
Vamp1-202ENSMUST00000063588 Gnat3Q3V3I2 354 aa13.82□□□□□ -0.2
Vamp1-202ENSMUST00000063588 Smg7Q5RJH6 1138 aaKnown RBP13.82□□□□□ -0.2
Vamp1-202ENSMUST00000063588 Fkbp5Q64378 456 aa13.82□□□□□ -0.2
Vamp1-202ENSMUST00000063588 Htatsf1Q8BGC0 757 aa13.82□□□□□ -0.2
Vamp1-202ENSMUST00000063588 Pm20d1Q8C165 503 aa13.82□□□□□ -0.2
Vamp1-202ENSMUST00000063588 Zbtb3Q91X45 518 aa13.82□□□□□ -0.2
Vamp1-202ENSMUST00000063588 Tfip11Q9ERA6 838 aaKnown RBP13.82□□□□□ -0.2
Vamp1-202ENSMUST00000063588 Exoc5Q3TPX4 708 aa13.81□□□□□ -0.2
Vamp1-202ENSMUST00000063588 Gnl3lQ6PGG6 577 aaKnown RBP13.81□□□□□ -0.2
Vamp1-202ENSMUST00000063588 GorabQ8BRM2 368 aa13.81□□□□□ -0.2
Vamp1-202ENSMUST00000063588 Pde4dQ01063 747 aa13.81□□□□□ -0.2
Vamp1-202ENSMUST00000063588 Mrps27Q8BK72 415 aaKnown RBP13.81□□□□□ -0.2
Vamp1-202ENSMUST00000063588 EngaseQ8BX80 734 aa13.81□□□□□ -0.2
Vamp1-202ENSMUST00000063588 Hdac6Q9Z2V5 1149 aa13.81□□□□□ -0.2
Vamp1-202ENSMUST00000063588 Tnrc6cQ3UHC0 1690 aaKnown RBP13.81□□□□□ -0.2
Vamp1-202ENSMUST00000063588 Col22a1E9Q7P1 1613 aa13.8□□□□□ -0.2
Vamp1-202ENSMUST00000063588 Tbc1d4Q8BYJ6 1307 aa13.8□□□□□ -0.2
Vamp1-202ENSMUST00000063588 AK157302I3ITR1 129 aa13.8□□□□□ -0.2
Vamp1-202ENSMUST00000063588 Pa2g4P50580 394 aaKnown RBP13.8□□□□□ -0.2
Vamp1-202ENSMUST00000063588 Soga3Q6NZL0 945 aa13.8□□□□□ -0.2
Vamp1-202ENSMUST00000063588 Ankrd23Q812A3 306 aa13.8□□□□□ -0.2
Vamp1-202ENSMUST00000063588 Sf3a1Q8K4Z5 791 aaKnown RBP13.8□□□□□ -0.2
Vamp1-202ENSMUST00000063588 Bcl11bQ99PV8 884 aa13.8□□□□□ -0.2
Vamp1-202ENSMUST00000063588 Isca1Q9D924 129 aa13.8□□□□□ -0.2
Vamp1-202ENSMUST00000063588 Stard3nlQ9DCI3 235 aa13.8□□□□□ -0.2
Vamp1-202ENSMUST00000063588 Abca3Q8R420 1704 aa13.8□□□□□ -0.2
Vamp1-202ENSMUST00000063588 Sos2Q02384 1333 aa13.79□□□□□ -0.2
Vamp1-202ENSMUST00000063588 Gigyf1Q99MR1 1044 aaKnown RBP13.79□□□□□ -0.2
Vamp1-202ENSMUST00000063588 Cap2Q9CYT6 476 aa13.79□□□□□ -0.2
Vamp1-202ENSMUST00000063588 Cwc25Q9DBF7 416 aa13.79□□□□□ -0.2
Vamp1-202ENSMUST00000063588 MccE9PWI3 1003 aa13.78□□□□□ -0.2
Vamp1-202ENSMUST00000063588 Anapc15P60007 132 aa13.78□□□□□ -0.2
Vamp1-202ENSMUST00000063588 GpkowQ56A08 488 aa13.78□□□□□ -0.2
Vamp1-202ENSMUST00000063588 Unc5clQ6R653 518 aa13.78□□□□□ -0.2
Vamp1-202ENSMUST00000063588 Jmjd4Q8BFT6 427 aa13.78□□□□□ -0.2
Vamp1-202ENSMUST00000063588 Catsper2A2ARP9 588 aa13.77□□□□□ -0.21
Vamp1-202ENSMUST00000063588 NmiO35309 314 aa13.77□□□□□ -0.21
Vamp1-202ENSMUST00000063588 Hsp90b1P08113 802 aaKnown RBP13.77□□□□□ -0.21
Vamp1-202ENSMUST00000063588 Hspa2P17156 633 aa13.77□□□□□ -0.21
Vamp1-202ENSMUST00000063588 Fam228bQ497Q6 232 aa13.77□□□□□ -0.21
Vamp1-202ENSMUST00000063588 Rbm27Q5SFM8 1060 aaKnown RBP13.77□□□□□ -0.21
Vamp1-202ENSMUST00000063588 Smc4Q8CG47 1286 aa13.77□□□□□ -0.21
Vamp1-202ENSMUST00000063588 Ipo4Q8VI75 1082 aa13.77□□□□□ -0.21
Vamp1-202ENSMUST00000063588 Taf5lQ91WQ5 589 aa13.77□□□□□ -0.21
Vamp1-202ENSMUST00000063588 Greb1lB9EJV3 1913 aa13.77□□□□□ -0.21
Vamp1-202ENSMUST00000063588 MetP16056 1379 aa13.76□□□□□ -0.21
Vamp1-202ENSMUST00000063588 Ric1Q69ZJ7 1422 aa13.76□□□□□ -0.21
Vamp1-202ENSMUST00000063588 AtrnQ9WU60 1428 aa13.76□□□□□ -0.21
Vamp1-202ENSMUST00000063588 Prr29B1ARI9 187 aa13.76□□□□□ -0.21
Vamp1-202ENSMUST00000063588 ArxO35085 564 aa13.76□□□□□ -0.21
Vamp1-202ENSMUST00000063588 Myd88P22366 296 aa13.76□□□□□ -0.21
Vamp1-202ENSMUST00000063588 Ccdc129Q14B48 1034 aa13.76□□□□□ -0.21
Vamp1-202ENSMUST00000063588 Dcaf5Q80T85 946 aa13.76□□□□□ -0.21
Vamp1-202ENSMUST00000063588 Ppp4r3aQ6P2K6 820 aa13.75□□□□□ -0.21
Vamp1-202ENSMUST00000063588 NexnQ7TPW1 607 aa13.75□□□□□ -0.21
Vamp1-202ENSMUST00000063588 Prune1Q8BIW1 454 aa13.75□□□□□ -0.21
Vamp1-202ENSMUST00000063588 Rhot2Q8JZN7 620 aa13.75□□□□□ -0.21
Vamp1-202ENSMUST00000063588 Fam213aQ9CYH2 218 aa13.75□□□□□ -0.21
Vamp1-202ENSMUST00000063588 Ltb4r2Q9JJL9 360 aa13.75□□□□□ -0.21
Vamp1-202ENSMUST00000063588 Bag3Q9JLV1 577 aaKnown RBP13.75□□□□□ -0.21
Vamp1-202ENSMUST00000063588 Lama4P97927 1816 aa13.75□□□□□ -0.21
Vamp1-202ENSMUST00000063588 Myh1Q5SX40 1942 aa13.75□□□□□ -0.21
Vamp1-202ENSMUST00000063588 Prl3d3A0A0M6L0J6 224 aa13.74□□□□□ -0.21
Vamp1-202ENSMUST00000063588 Brpf1B2RRD7 1212 aa13.74□□□□□ -0.21
Vamp1-202ENSMUST00000063588 Prl3d2F6R3P9 224 aa13.74□□□□□ -0.21
Vamp1-202ENSMUST00000063588 Nlrp1aQ2LKU9 1182 aa13.74□□□□□ -0.21
Vamp1-202ENSMUST00000063588 Adora1Q60612 326 aa13.74□□□□□ -0.21
Vamp1-202ENSMUST00000063588 Ankrd31A0A140LI88 1765 aa13.74□□□□□ -0.21
Vamp1-202ENSMUST00000063588 Ddb1Q3U1J4 1140 aaKnown RBP13.73□□□□□ -0.21
Vamp1-202ENSMUST00000063588 Brf1Q8CFK2 676 aa13.73□□□□□ -0.21
Vamp1-202ENSMUST00000063588 Slc5a4bQ91ZP4 660 aa13.73□□□□□ -0.21
Vamp1-202ENSMUST00000063588 Zkscan16A2ALW2 728 aa13.73□□□□□ -0.21
Vamp1-202ENSMUST00000063588 Rsph3aQ3UFY4 516 aa13.73□□□□□ -0.21
Vamp1-202ENSMUST00000063588 Q8C5K5 320 aa13.73□□□□□ -0.21
Vamp1-202ENSMUST00000063588 AnlnQ8K298 1121 aaKnown RBP13.73□□□□□ -0.21
Vamp1-202ENSMUST00000063588 LlphQ9D945 130 aaKnown RBP13.73□□□□□ -0.21
Vamp1-202ENSMUST00000063588 Ppfia1B2RXQ2 1266 aa13.72□□□□□ -0.21
Vamp1-202ENSMUST00000063588 CalcaP70160 136 aa13.72□□□□□ -0.21
Vamp1-202ENSMUST00000063588 Ankib1Q6ZPS6 1085 aa13.72□□□□□ -0.21
Vamp1-202ENSMUST00000063588 Pknox2Q8BG99 474 aa13.72□□□□□ -0.21
Vamp1-202ENSMUST00000063588 Slc26a8Q8R0C3 999 aa13.72□□□□□ -0.21
Vamp1-202ENSMUST00000063588 Cyp27a1Q9DBG1 533 aa13.72□□□□□ -0.21
Vamp1-202ENSMUST00000063588 Hspa1lP16627 641 aa13.71□□□□□ -0.22
Vamp1-202ENSMUST00000063588 Fkbp1aP26883 108 aaKnown RBP13.71□□□□□ -0.22
Vamp1-202ENSMUST00000063588 Plcb3P51432 1234 aaKnown RBP13.71□□□□□ -0.22
Vamp1-202ENSMUST00000063588 Pmfbp1Q9WVQ0 1022 aa13.71□□□□□ -0.22
Vamp1-202ENSMUST00000063588 Rad50P70388 1312 aa13.71□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 122.9 ms