RNA–Protein interactions for RNA: ENSMUST00000031971.12

Ssbp1-201, Transcript of Single-stranded DNA-binding protein, mitochondrial, mousemouse

TSL 1 (best) BASIC

Gene Ssbp1, Length 1,063 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp1-201ENSMUST00000031971 Msx1P13297 303 aa10.56□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 Txnrd1Q9JMH6 613 aa10.56□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 Ubr1O70481 1757 aa10.56□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 Bcl9lQ67FY2 1494 aa10.55□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 Slit2Q9R1B9 1521 aa10.55□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 Nfat5Q9WV30 1534 aa10.55□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 Irs1P35569 1233 aa10.55□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 Phf12Q5SPL2 1003 aa10.55□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 MypopQ8R4U1 393 aa10.55□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 Dcaf11Q91VU6 549 aa10.55□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 Dhx30Q99PU8 1217 aaKnown RBP10.55□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 Gprasp1Q5U4C1 1347 aa10.55□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 Ncapd2Q8K2Z4 1392 aa10.54□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 Nfx1B1AY10 1114 aaKnown RBP10.54□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 Adam19O35674 920 aa10.54□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 Epb42P49222 691 aa10.54□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 Atp6v1aP50516 617 aaKnown RBP10.54□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 Kif7B7ZNG0 1348 aa10.54□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 Siglec1Q62230 1695 aa10.53□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 Astn2Q80Z10 1352 aa10.53□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 AW822073A0A0N4SUK1 652 aa10.53□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 Ncoa4Q5U4H9 625 aa10.53□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 DmknQ6P253 517 aa10.53□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 Zbtb42Q811H0 420 aa10.53□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 Dennd6aQ8BH65 605 aa10.53□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 P2rx7Q9Z1M0 595 aa10.53□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 Robo1O89026 1612 aa10.53□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 Cdk12Q14AX6 1484 aaKnown RBP10.53□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 Scn7aB1AYL1 1681 aa10.53□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 Mdc1Q5PSV9 1707 aa10.53□□□□□ -0.72
Ssbp1-201ENSMUST00000031971 FancaQ9JL70 1439 aa10.52□□□□□ -0.73
Ssbp1-201ENSMUST00000031971 Gm21190A0A0G2JGJ6 266 aa10.52□□□□□ -0.73
Ssbp1-201ENSMUST00000031971 JundP15066 341 aa10.52□□□□□ -0.73
Ssbp1-201ENSMUST00000031971 PrimpolQ6P1E7 537 aa10.52□□□□□ -0.73
Ssbp1-201ENSMUST00000031971 Gtf2ird1Q9JI57 1104 aaKnown RBP10.52□□□□□ -0.73
Ssbp1-201ENSMUST00000031971 CemipQ8BI06 1361 aa10.52□□□□□ -0.73
Ssbp1-201ENSMUST00000031971 Nid2O88322 1403 aa10.51□□□□□ -0.73
Ssbp1-201ENSMUST00000031971 Tex14Q7M6U3 1450 aa10.51□□□□□ -0.73
Ssbp1-201ENSMUST00000031971 ClmQ7TSN2 230 aa10.51□□□□□ -0.73
Ssbp1-201ENSMUST00000031971 MetrnlQ8VE43 311 aa10.51□□□□□ -0.73
Ssbp1-201ENSMUST00000031971 Q9CYS6 286 aa10.51□□□□□ -0.73
Ssbp1-201ENSMUST00000031971 Map2P20357 1828 aa10.51□□□□□ -0.73
Ssbp1-201ENSMUST00000031971 Zmym3Q9JLM4 1370 aa10.51□□□□□ -0.73
Ssbp1-201ENSMUST00000031971 Rc3h1Q4VGL6 1130 aaKnown RBP10.5□□□□□ -0.73
Ssbp1-201ENSMUST00000031971 Tmem132eQ6IEE6 982 aa10.5□□□□□ -0.73
Ssbp1-201ENSMUST00000031971 Fnbp4Q6ZQ03 1031 aa10.5□□□□□ -0.73
Ssbp1-201ENSMUST00000031971 Ddx54Q8K4L0 874 aaKnown RBP10.5□□□□□ -0.73
Ssbp1-201ENSMUST00000031971 Dnajc14Q921R4 703 aa10.5□□□□□ -0.73
Ssbp1-201ENSMUST00000031971 Dnajc10Q9DC23 793 aa10.5□□□□□ -0.73
Ssbp1-201ENSMUST00000031971 Cdhr2E9Q7P9 1308 aa10.5□□□□□ -0.73
Ssbp1-201ENSMUST00000031971 ClspnQ80YR7 1315 aa10.5□□□□□ -0.73
Ssbp1-201ENSMUST00000031971 Hcn4O70507 1186 aa10.49□□□□□ -0.73
Ssbp1-201ENSMUST00000031971 Eno4Q8C042 619 aa10.49□□□□□ -0.73
Ssbp1-201ENSMUST00000031971 Gm21698A0A087WQP8 267 aa10.48□□□□□ -0.73
Ssbp1-201ENSMUST00000031971 Rhox1B1APN4 224 aa10.48□□□□□ -0.73
Ssbp1-201ENSMUST00000031971 Gm21671G3UY31 267 aa10.48□□□□□ -0.73
Ssbp1-201ENSMUST00000031971 Birc3O08863 600 aa10.48□□□□□ -0.73
Ssbp1-201ENSMUST00000031971 Fbxo18Q8K2I9 1042 aa10.48□□□□□ -0.73
Ssbp1-201ENSMUST00000031971 Eml3Q8VC03 897 aa10.48□□□□□ -0.73
Ssbp1-201ENSMUST00000031971 Cabp4Q8VHC5 271 aa10.48□□□□□ -0.73
Ssbp1-201ENSMUST00000031971 Themis2Q91YX0 663 aa10.48□□□□□ -0.73
Ssbp1-201ENSMUST00000031971 IbtkQ6ZPR6 1352 aaKnown RBP10.48□□□□□ -0.73
Ssbp1-201ENSMUST00000031971 TnrQ8BYI9 1358 aa10.48□□□□□ -0.73
Ssbp1-201ENSMUST00000031971 Ggt6Q6PDE7 497 aa10.47□□□□□ -0.73
Ssbp1-201ENSMUST00000031971 Lrrc59Q922Q8 307 aaKnown RBP10.47□□□□□ -0.73
Ssbp1-201ENSMUST00000031971 Ppp2r1aQ76MZ3 589 aa10.46□□□□□ -0.73
Ssbp1-201ENSMUST00000031971 Ncbp3Q8BZR9 615 aaKnown RBP10.46□□□□□ -0.73
Ssbp1-201ENSMUST00000031971 Fam174aQ9D3L0 190 aa10.46□□□□□ -0.73
Ssbp1-201ENSMUST00000031971 Pard3Q99NH2 1333 aa10.46□□□□□ -0.73
Ssbp1-201ENSMUST00000031971 Cald1E9QA15 768 aaKnown RBP10.45□□□□□ -0.74
Ssbp1-201ENSMUST00000031971 Psrc1Q9D0P7 329 aa10.45□□□□□ -0.74
Ssbp1-201ENSMUST00000031971 Hoxc9P09633 260 aa10.44□□□□□ -0.74
Ssbp1-201ENSMUST00000031971 Pcmtd1P59913 357 aa10.44□□□□□ -0.74
Ssbp1-201ENSMUST00000031971 Uhrf1bp1lA2RSJ4 1457 aa10.43□□□□□ -0.74
Ssbp1-201ENSMUST00000031971 Shank2Q80Z38 1476 aa10.43□□□□□ -0.74
Ssbp1-201ENSMUST00000031971 Ptk2P34152 1090 aa10.43□□□□□ -0.74
Ssbp1-201ENSMUST00000031971 Card10P58660 1021 aa10.43□□□□□ -0.74
Ssbp1-201ENSMUST00000031971 Kmt5bQ3U8K7 883 aa10.43□□□□□ -0.74
Ssbp1-201ENSMUST00000031971 Trim28Q62318 834 aa10.43□□□□□ -0.74
Ssbp1-201ENSMUST00000031971 Lrig3Q6P1C6 1117 aa10.43□□□□□ -0.74
Ssbp1-201ENSMUST00000031971 RgmbQ7TQ33 436 aa10.43□□□□□ -0.74
Ssbp1-201ENSMUST00000031971 Nop53Q8BK35 484 aaKnown RBP10.43□□□□□ -0.74
Ssbp1-201ENSMUST00000031971 LmlnQ8BMN4 681 aa10.43□□□□□ -0.74
Ssbp1-201ENSMUST00000031971 Leng1Q9DB98 261 aa10.43□□□□□ -0.74
Ssbp1-201ENSMUST00000031971 SrfQ9JM73 504 aa10.43□□□□□ -0.74
Ssbp1-201ENSMUST00000031971 Ptpn23Q6PB44 1692 aa10.43□□□□□ -0.74
Ssbp1-201ENSMUST00000031971 P01645 108 aa10.42□□□□□ -0.74
Ssbp1-201ENSMUST00000031971 ArafP04627 604 aa10.42□□□□□ -0.74
Ssbp1-201ENSMUST00000031971 Hoxb7P09024 217 aa10.42□□□□□ -0.74
Ssbp1-201ENSMUST00000031971 PtgdrP70263 357 aa10.42□□□□□ -0.74
Ssbp1-201ENSMUST00000031971 Q7TT23 1179 aa10.42□□□□□ -0.74
Ssbp1-201ENSMUST00000031971 Amotl2Q8K371 772 aa10.42□□□□□ -0.74
Ssbp1-201ENSMUST00000031971 TatQ8QZR1 454 aa10.42□□□□□ -0.74
Ssbp1-201ENSMUST00000031971 Kcnh5Q920E3 988 aa10.42□□□□□ -0.74
Ssbp1-201ENSMUST00000031971 Limd1Q9QXD8 668 aa10.42□□□□□ -0.74
Ssbp1-201ENSMUST00000031971 Ccdc129Q14B48 1034 aa10.41□□□□□ -0.74
Ssbp1-201ENSMUST00000031971 Zfand3Q497H0 227 aa10.41□□□□□ -0.74
Ssbp1-201ENSMUST00000031971 Sgsm1Q8BPQ7 1093 aa10.41□□□□□ -0.74
Ssbp1-201ENSMUST00000031971 Nubp1Q9R060 320 aa10.41□□□□□ -0.74
Ssbp1-201ENSMUST00000031971 Tnrc6cQ3UHC0 1690 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 28.8 ms