RNA–Protein interactions for RNA: snR17a

snR17a, Transcript of Small nucleolar RNA (snoRNA) U3, yeastyeast

Gene snR17a, Length 333 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR17asnR17a DAL5P15365 543 aa4.54□□□□□ -1.68
snR17asnR17a RPA135P22138 1203 aaKnown RBP4.54□□□□□ -1.68
snR17asnR17a SPT20P50875 604 aa4.54□□□□□ -1.68
snR17asnR17a DOS2P54858 310 aa4.54□□□□□ -1.68
snR17asnR17a GCN5Q03330 439 aa4.54□□□□□ -1.68
snR17asnR17a TIF35Q04067 274 aaKnown RBP4.54□□□□□ -1.68
snR17asnR17a PLP2Q12017 286 aa4.54□□□□□ -1.68
snR17asnR17a SVS1Q12254 260 aa4.54□□□□□ -1.68
snR17asnR17a THS1P04801 734 aaKnown RBP4.53□□□□□ -1.68
snR17asnR17a GAL11P19659 1081 aa4.53□□□□□ -1.68
snR17asnR17a PRE10P21242 288 aaKnown RBP RIP-Chip data4.53□□□□□ -1.68not detected
snR17asnR17a BAS1P22035 811 aa4.53□□□□□ -1.68
snR17asnR17a PET112P33893 541 aa4.53□□□□□ -1.68
snR17asnR17a PBP1P53297 722 aaKnown RBP4.53□□□□□ -1.68
snR17asnR17a YDR132CQ03900 495 aa4.53□□□□□ -1.68
snR17asnR17a ATG13Q06628 738 aa4.53□□□□□ -1.68
snR17asnR17a BRE1Q07457 700 aaKnown RBP4.53□□□□□ -1.68
snR17asnR17a CMP2P14747 604 aa4.52□□□□□ -1.69
snR17asnR17a APL1P27351 700 aa4.52□□□□□ -1.69
snR17asnR17a MNR2P35724 969 aa4.52□□□□□ -1.69
snR17asnR17a ABZ1P37254 787 aaPredicted RBP4.52□□□□□ -1.69
snR17asnR17a GEM1P39722 662 aa4.52□□□□□ -1.69
snR17asnR17a ROT1Q03691 256 aa4.52□□□□□ -1.69
snR17asnR17a UBX5Q06682 500 aa4.52□□□□□ -1.69
snR17asnR17a CDC34P14682 295 aa4.51□□□□□ -1.69
snR17asnR17a LYP1P32487 611 aa4.51□□□□□ -1.69
snR17asnR17a FPR3P38911 411 aaKnown RBP4.51□□□□□ -1.69
snR17asnR17a SNF7P39929 240 aaKnown RBP4.51□□□□□ -1.69
snR17asnR17a YFL054CP43549 646 aa4.51□□□□□ -1.69
snR17asnR17a CLU1Q03690 1277 aaKnown RBP4.51□□□□□ -1.69
snR17asnR17a SPP382Q06411 708 aaPredicted RBP4.51□□□□□ -1.69
snR17asnR17a ACM1Q08981 209 aa4.51□□□□□ -1.69
snR17asnR17a GAL10P04397 699 aa4.5□□□□□ -1.69
snR17asnR17a RPL11AP0C0W9 174 aaKnown RBP4.5□□□□□ -1.69
snR17asnR17a DOM34P33309 386 aa4.5□□□□□ -1.69
snR17asnR17a TOM20P35180 183 aa4.5□□□□□ -1.69
snR17asnR17a UGA2P38067 497 aa4.5□□□□□ -1.69
snR17asnR17a PMC1P38929 1173 aaPredicted RBP4.5□□□□□ -1.69
snR17asnR17a MXR1P40029 184 aa4.5□□□□□ -1.69
snR17asnR17a RRT14P40470 206 aa4.5□□□□□ -1.69
snR17asnR17a TYW3P53177 273 aa4.5□□□□□ -1.69
snR17asnR17a MAP1Q01662 387 aaKnown RBP RIP-Chip data4.5□□□□□ -1.69not detected
snR17asnR17a RXT3Q07458 294 aa4.5□□□□□ -1.69
snR17asnR17a RPL11BQ3E757 174 aaPredicted RBP4.5□□□□□ -1.69
snR17asnR17a TRP2P00899 507 aaKnown RBP4.49□□□□□ -1.69
snR17asnR17a MPE1P35728 441 aaKnown RBP4.49□□□□□ -1.69
snR17asnR17a OCA5P38738 679 aa4.49□□□□□ -1.69
snR17asnR17a TAT2P38967 592 aa4.49□□□□□ -1.69
snR17asnR17a PLB2Q03674 706 aa4.49□□□□□ -1.69
snR17asnR17a SIZ1Q04195 904 aa4.49□□□□□ -1.69
snR17asnR17a SPO20Q04359 397 aa4.49□□□□□ -1.69
snR17asnR17a DUS4Q06063 367 aa4.49□□□□□ -1.69
snR17asnR17a RKM4Q12504 494 aa4.49□□□□□ -1.69
snR17asnR17a INO1P11986 533 aa4.48□□□□□ -1.69
snR17asnR17a ACE2P21192 770 aa4.48□□□□□ -1.69
snR17asnR17a DUT1P33317 147 aa4.48□□□□□ -1.69
snR17asnR17a PNT1P38969 423 aa4.48□□□□□ -1.69
snR17asnR17a MPT5P39016 859 aaKnown RBP RIP-Chip data4.48□□□□□ -1.69not detected
snR17asnR17a NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.48□□□□□ -1.69not detected
snR17asnR17a GIR2Q03768 265 aaPredicted RBP4.48□□□□□ -1.69
snR17asnR17a GSF2Q04697 403 aaKnown RBP4.48□□□□□ -1.69
snR17asnR17a VTS1Q08831 523 aaKnown RBP RIP-Chip data4.48□□□□□ -1.69not detected
snR17asnR17a GPB1Q08886 897 aa4.48□□□□□ -1.69
snR17asnR17a HSP82P02829 709 aaKnown RBP4.47□□□□□ -1.69
snR17asnR17a SRM1P21827 482 aa4.47□□□□□ -1.69
snR17asnR17a YKL107WP34251 309 aa4.47□□□□□ -1.69
snR17asnR17a SHM2P37291 469 aaKnown RBP4.47□□□□□ -1.69
snR17asnR17a MEH1Q02205 184 aa4.47□□□□□ -1.69
snR17asnR17a ACK1Q07622 623 aaPredicted RBP4.47□□□□□ -1.69
snR17asnR17a PSK2Q08217 1101 aa4.47□□□□□ -1.69
snR17asnR17a BI4P03879 638 aa4.46□□□□□ -1.7
snR17asnR17a CDC20P26309 610 aa4.46□□□□□ -1.7
snR17asnR17a CTS1P29029 562 aa4.46□□□□□ -1.7
snR17asnR17a SLA2P33338 968 aa4.46□□□□□ -1.7
snR17asnR17a ERP2P39704 215 aa4.46□□□□□ -1.7
snR17asnR17a EEB1Q02891 456 aa4.46□□□□□ -1.7
snR17asnR17a MSC2Q03455 724 aa4.46□□□□□ -1.7
snR17asnR17a RIB2Q12362 591 aaKnown RBP4.46□□□□□ -1.7
snR17asnR17a CLN2P20438 545 aa4.45□□□□□ -1.7
snR17asnR17a DBP2P24783 546 aaKnown RBP4.45□□□□□ -1.7
snR17asnR17a MOT2P34909 587 aaKnown RBP4.45□□□□□ -1.7
snR17asnR17a HOS4P40480 1083 aa4.45□□□□□ -1.7
snR17asnR17a YGL176CP46945 554 aa4.45□□□□□ -1.7
snR17asnR17a ECM16Q04217 1267 aaKnown RBP4.45□□□□□ -1.7
snR17asnR17a RPP2AP05319 106 aaKnown RBP4.44□□□□□ -1.7
snR17asnR17a STE11P23561 717 aa4.44□□□□□ -1.7
snR17asnR17a PIN4P34217 668 aaKnown RBP RIP-Chip data4.44□□□□□ -1.7not detected
snR17asnR17a NMD2P38798 1089 aaKnown RBP4.44□□□□□ -1.7
snR17asnR17a GTF1P53260 183 aaPredicted RBP4.44□□□□□ -1.7
snR17asnR17a TUB2P02557 457 aaKnown RBP4.43□□□□□ -1.7
snR17asnR17a MNN10P50108 393 aaKnown RBP4.43□□□□□ -1.7
snR17asnR17a HFM1P51979 1187 aa4.43□□□□□ -1.7
snR17asnR17a YGR053CP53234 283 aa4.43□□□□□ -1.7
snR17asnR17a VPS62P53285 467 aa4.43□□□□□ -1.7
snR17asnR17a SVF1Q05515 481 aa4.43□□□□□ -1.7
snR17asnR17a YLR225CQ05948 407 aaKnown RBP4.43□□□□□ -1.7
snR17asnR17a YDL121CQ07541 149 aa4.43□□□□□ -1.7
snR17asnR17a OSW2Q12202 724 aa4.43□□□□□ -1.7
snR17asnR17a CDC6P09119 513 aa4.42□□□□□ -1.7
snR17asnR17a TSR4P25040 408 aa4.42□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 34.6 ms