RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO1YPL232W SSF2Q12153 453 aaPredicted RBP6.03□□□□□ -1.44
SSO1YPL232W SNF1P06782 633 aaKnown RBP6.02□□□□□ -1.45
SSO1YPL232W APE1P14904 514 aa6.02□□□□□ -1.45
SSO1YPL232W RPL8AP17076 256 aaKnown RBP6.02□□□□□ -1.45
SSO1YPL232W SKI2P35207 1287 aaKnown RBP RIP-Chip data6.02□□□□□ -1.45not detected
SSO1YPL232W MRPL7P36519 292 aa6.02□□□□□ -1.45
SSO1YPL232W PTC4P38089 393 aa6.02□□□□□ -1.45
SSO1YPL232W CCC2P38995 1004 aa6.02□□□□□ -1.45
SSO1YPL232W YDR344CQ05510 147 aa6.02□□□□□ -1.45
SSO1YPL232W DSE3Q08729 430 aa6.02□□□□□ -1.45
SSO1YPL232W SAM3Q08986 587 aa6.02□□□□□ -1.45
SSO1YPL232W NCR1Q12200 1170 aa6.02□□□□□ -1.45
SSO1YPL232W SEC61P32915 480 aa6.01□□□□□ -1.45
SSO1YPL232W PEX28P38848 579 aa6.01□□□□□ -1.45
SSO1YPL232W TPM2P40414 161 aa6.01□□□□□ -1.45
SSO1YPL232W ESL1P40456 1118 aa6.01□□□□□ -1.45
SSO1YPL232W HUL5P53119 910 aa6.01□□□□□ -1.45
SSO1YPL232W PUF6Q04373 656 aaKnown RBP6.01□□□□□ -1.45
SSO1YPL232W MFB1Q04922 465 aa6.01□□□□□ -1.45
SSO1YPL232W SPN1Q06505 410 aaPredicted RBP6.01□□□□□ -1.45
SSO1YPL232W STB3Q12427 513 aa6.01□□□□□ -1.45
SSO1YPL232W RRD2Q12461 358 aa6.01□□□□□ -1.45
SSO1YPL232W SES1P07284 462 aaKnown RBP6□□□□□ -1.45
SSO1YPL232W CDC16P09798 840 aa6□□□□□ -1.45
SSO1YPL232W HCM1P25364 564 aa6□□□□□ -1.45
SSO1YPL232W PWP2P25635 923 aaKnown RBP6□□□□□ -1.45
SSO1YPL232W YHL026CP38740 315 aa6□□□□□ -1.45
SSO1YPL232W RIM4P38741 713 aa6□□□□□ -1.45
SSO1YPL232W CRG1P38892 291 aaRIP-Chip data6□□□□□ -1.45not detected
SSO1YPL232W ARP6Q12509 438 aa6□□□□□ -1.45
SSO1YPL232W TRP2P00899 507 aaKnown RBP5.99□□□□□ -1.45
SSO1YPL232W RER2P35196 286 aa5.99□□□□□ -1.45
SSO1YPL232W UBP11P36026 717 aa5.99□□□□□ -1.45
SSO1YPL232W DID4P36108 232 aa5.99□□□□□ -1.45
SSO1YPL232W UBX7P38349 436 aa5.99□□□□□ -1.45
SSO1YPL232W SUL1P38359 859 aa5.99□□□□□ -1.45
SSO1YPL232W YAP1801P38856 637 aa5.99□□□□□ -1.45
SSO1YPL232W YHR202WP38887 602 aa5.99□□□□□ -1.45
SSO1YPL232W YIR016WP40572 265 aa5.99□□□□□ -1.45
SSO1YPL232W CIT3P43635 486 aa5.99□□□□□ -1.45
SSO1YPL232W GDE1Q02979 1223 aa5.99□□□□□ -1.45
SSO1YPL232W TFC6Q06339 672 aa5.99□□□□□ -1.45
SSO1YPL232W PCD1Q12524 340 aa5.99□□□□□ -1.45
SSO1YPL232W SEC21P32074 935 aaKnown RBP5.98□□□□□ -1.45
SSO1YPL232W EFT1P32324 842 aaKnown RBP5.98□□□□□ -1.45
SSO1YPL232W ISW1P38144 1129 aa5.98□□□□□ -1.45
SSO1YPL232W LEO1P38439 464 aa5.98□□□□□ -1.45
SSO1YPL232W TFG1P41895 735 aaPredicted RBP5.98□□□□□ -1.45
SSO1YPL232W MAF1P41910 395 aa5.98□□□□□ -1.45
SSO1YPL232W ALG2P43636 503 aa5.98□□□□□ -1.45
SSO1YPL232W ASE1P50275 885 aa5.98□□□□□ -1.45
SSO1YPL232W YNL134CP53912 376 aaKnown RBP5.98□□□□□ -1.45
SSO1YPL232W YLR257WQ06146 321 aaKnown RBP5.98□□□□□ -1.45
SSO1YPL232W MNL2Q12205 849 aa5.98□□□□□ -1.45
SSO1YPL232W PGK1P00560 416 aaKnown RBP5.97□□□□□ -1.45
SSO1YPL232W ADE2P21264 571 aaKnown RBP5.97□□□□□ -1.45
SSO1YPL232W PEX1P24004 1043 aa5.97□□□□□ -1.45
SSO1YPL232W GCS1P35197 352 aa5.97□□□□□ -1.45
SSO1YPL232W ZPR1P53303 486 aaKnown RBP5.97□□□□□ -1.45
SSO1YPL232W ORC4P54791 529 aa5.97□□□□□ -1.45
SSO1YPL232W PML39Q03760 334 aa5.97□□□□□ -1.45
SSO1YPL232W PHM6Q05637 104 aa5.97□□□□□ -1.45
SSO1YPL232W CRD1Q07560 283 aa5.97□□□□□ -1.45
SSO1YPL232W OXR1Q08952 273 aa5.97□□□□□ -1.45
SSO1YPL232W BIO2P32451 375 aa5.96□□□□□ -1.46
SSO1YPL232W SEG2P34250 1132 aa5.96□□□□□ -1.46
SSO1YPL232W RFC1P38630 861 aaKnown RBP5.96□□□□□ -1.46
SSO1YPL232W ALT2P52892 507 aa5.96□□□□□ -1.46
SSO1YPL232W OYE2Q03558 400 aaKnown RBP5.96□□□□□ -1.46
SSO1YPL232W MRI1Q06489 411 aaKnown RBP5.96□□□□□ -1.46
SSO1YPL232W MRN1Q08925 612 aaKnown RBP RIP-Chip data5.96□□□□□ -1.46not detected
SSO1YPL232W YOR111WQ99210 232 aa5.96□□□□□ -1.46
SSO1YPL232W WHI2P12611 486 aa5.95□□□□□ -1.46
SSO1YPL232W RNR3P21672 869 aaKnown RBP5.95□□□□□ -1.46
SSO1YPL232W ESS1P22696 170 aa5.95□□□□□ -1.46
SSO1YPL232W COY1P34237 679 aa5.95□□□□□ -1.46
SSO1YPL232W ACF4P47129 309 aa5.95□□□□□ -1.46
SSO1YPL232W SVF1Q05515 481 aa5.95□□□□□ -1.46
SSO1YPL232W PEX19Q07418 342 aa5.95□□□□□ -1.46
SSO1YPL232W PIN2Q12057 282 aa5.95□□□□□ -1.46
SSO1YPL232W HIF1Q12373 385 aa5.95□□□□□ -1.46
SSO1YPL232W IRA1P18963 3092 aa5.95□□□□□ -1.46
SSO1YPL232W HIS5P07172 385 aa5.94□□□□□ -1.46
SSO1YPL232W CCL1P37366 393 aa5.94□□□□□ -1.46
SSO1YPL232W CAF120P53836 1060 aa5.94□□□□□ -1.46
SSO1YPL232W HFI1Q12060 488 aa5.94□□□□□ -1.46
SSO1YPL232W CIT1P00890 479 aa5.93□□□□□ -1.46
SSO1YPL232W HTA1P04911 132 aaKnown RBP5.93□□□□□ -1.46
SSO1YPL232W HTA2P04912 132 aa5.93□□□□□ -1.46
SSO1YPL232W DED1P06634 604 aaKnown RBP5.93□□□□□ -1.46
SSO1YPL232W RAM1P22007 431 aa5.93□□□□□ -1.46
SSO1YPL232W CSE2P33308 149 aa5.93□□□□□ -1.46
SSO1YPL232W XDJ1P39102 459 aa5.93□□□□□ -1.46
SSO1YPL232W YEL023CP39992 682 aa5.93□□□□□ -1.46
SSO1YPL232W GPD2P41911 440 aaKnown RBP5.93□□□□□ -1.46
SSO1YPL232W JJJ3P47138 172 aa5.93□□□□□ -1.46
SSO1YPL232W DOT1Q04089 582 aaKnown RBP5.93□□□□□ -1.46
SSO1YPL232W RIM20Q12033 661 aa5.93□□□□□ -1.46
SSO1YPL232W YOR022CQ12204 715 aa5.93□□□□□ -1.46
SSO1YPL232W MSB2P32334 1306 aa5.93□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 39.6 ms