RNA–Protein interactions for RNA: YPL074W

YTA6, Transcript of Putative ATPase of the CDC48/PAS1/SEC18 (AAA) family, yeast

Gene YTA6, Length 2,265 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YTA6	YPL074W	RTP1	Q12751	981 aa		5.22	□□□□□ -1.57
YTA6	YPL074W	TPM1	P17536	199 aa	Known RBP	5.21	□□□□□ -1.58
YTA6	YPL074W	OPI1	P21957	404 aa		5.21	□□□□□ -1.58
YTA6	YPL074W	PTC4	P38089	393 aa		5.21	□□□□□ -1.58
YTA6	YPL074W	TAF5	P38129	798 aa		5.21	□□□□□ -1.58
YTA6	YPL074W	SPP381	P38282	291 aa	Predicted RBP	5.21	□□□□□ -1.58
YTA6	YPL074W	RGA1	P39083	1007 aa		5.21	□□□□□ -1.58
YTA6	YPL074W	KAP123	P40069	1113 aa	Known RBP	5.21	□□□□□ -1.58
YTA6	YPL074W	TMN3	P40071	706 aa		5.21	□□□□□ -1.58
YTA6	YPL074W	STB2	P46679	850 aa		5.21	□□□□□ -1.58
YTA6	YPL074W	ALB1	P47019	175 aa	Predicted RBP	5.21	□□□□□ -1.58
YTA6	YPL074W	UFD2	P54860	961 aa		5.21	□□□□□ -1.58
YTA6	YPL074W	TAF12	Q03761	539 aa		5.21	□□□□□ -1.58
YTA6	YPL074W	ECM11	Q04110	302 aa		5.21	□□□□□ -1.58
YTA6	YPL074W	COA4	Q05809	96 aa		5.21	□□□□□ -1.58
YTA6	YPL074W	ATG17	Q06410	417 aa		5.21	□□□□□ -1.58
YTA6	YPL074W	TAF3	Q12297	353 aa		5.21	□□□□□ -1.58
YTA6	YPL074W	REP1	P03871	373 aa		5.21	□□□□□ -1.58
YTA6	YPL074W	YMR085W	P0CF18	432 aa		5.21	□□□□□ -1.58
YTA6	YPL074W	VMA1	P17255	1071 aa	Known RBP	5.21	□□□□□ -1.58
YTA6	YPL074W	RPB4	P20433	221 aa	Predicted RBP	5.21	□□□□□ -1.58
YTA6	YPL074W	TSR4	P25040	408 aa		5.21	□□□□□ -1.58
YTA6	YPL074W	TPS2	P31688	896 aa	Known RBP	5.21	□□□□□ -1.58
YTA6	YPL074W	YEL043W	P32618	956 aa		5.21	□□□□□ -1.58
YTA6	YPL074W	TFC4	P33339	1025 aa		5.21	□□□□□ -1.58
YTA6	YPL074W	OCA5	P38738	679 aa		5.21	□□□□□ -1.58
YTA6	YPL074W	CAJ1	P39101	391 aa		5.21	□□□□□ -1.58
YTA6	YPL074W	RTR1	P40084	226 aa	Predicted RBP	5.21	□□□□□ -1.58
YTA6	YPL074W	UBP15	P50101	1230 aa		5.21	□□□□□ -1.58
YTA6	YPL074W	MPS2	P53159	387 aa		5.21	□□□□□ -1.58
YTA6	YPL074W	DMA2	P53924	522 aa		5.21	□□□□□ -1.58
YTA6	YPL074W	MSH5	Q12175	901 aa		5.21	□□□□□ -1.58
YTA6	YPL074W	PRP6	P19735	899 aa	Predicted RBP	5.2	□□□□□ -1.58
YTA6	YPL074W	YAP1	P19880	650 aa	Known RBP	5.2	□□□□□ -1.58
YTA6	YPL074W	PHO3	P24031	467 aa		5.2	□□□□□ -1.58
YTA6	YPL074W	YJU2	P28320	278 aa	Predicted RBP	5.2	□□□□□ -1.58
YTA6	YPL074W	NFU1	P32860	256 aa		5.2	□□□□□ -1.58
YTA6	YPL074W	DBP7	P36120	742 aa	Known RBP	5.2	□□□□□ -1.58
YTA6	YPL074W	IFA38	P38286	347 aa		5.2	□□□□□ -1.58
YTA6	YPL074W	YER034W	P40022	185 aa	Known RBP	5.2	□□□□□ -1.58
YTA6	YPL074W	VHR2	P40041	505 aa		5.2	□□□□□ -1.58
YTA6	YPL074W	UBA2	P52488	636 aa		5.2	□□□□□ -1.58
YTA6	YPL074W	SLU7	Q02775	382 aa	Known RBP	5.2	□□□□□ -1.58
YTA6	YPL074W	WAR1	Q03631	944 aa		5.2	□□□□□ -1.58
YTA6	YPL074W	RRN11	Q04712	507 aa		5.2	□□□□□ -1.58
YTA6	YPL074W	YCG1	Q06680	1035 aa		5.2	□□□□□ -1.58
YTA6	YPL074W	RRP6	Q12149	733 aa	Known RBP	5.2	□□□□□ -1.58
YTA6	YPL074W	TRP5	P00931	707 aa	Known RBP	5.2	□□□□□ -1.58
YTA6	YPL074W	VPS1	P21576	704 aa	Known RBP	5.2	□□□□□ -1.58
YTA6	YPL074W	MGM1	P32266	881 aa		5.2	□□□□□ -1.58
YTA6	YPL074W	CBF2	P32504	956 aa		5.2	□□□□□ -1.58
YTA6	YPL074W	FES1	P38260	290 aa		5.2	□□□□□ -1.58
YTA6	YPL074W	VPS8	P39702	1274 aa		5.2	□□□□□ -1.58
YTA6	YPL074W	YER156C	P40093	338 aa	Known RBP	5.2	□□□□□ -1.58
YTA6	YPL074W	YFL066C	P43538	392 aa		5.2	□□□□□ -1.58
YTA6	YPL074W	APS3	P47064	194 aa		5.2	□□□□□ -1.58
YTA6	YPL074W	URB2	P47108	1174 aa		5.2	□□□□□ -1.58
YTA6	YPL074W	ISM1	P48526	1002 aa		5.2	□□□□□ -1.58
YTA6	YPL074W	GNP1	P48813	663 aa		5.2	□□□□□ -1.58
YTA6	YPL074W	ZPR1	P53303	486 aa	Known RBP	5.2	□□□□□ -1.58
YTA6	YPL074W	GTR1	Q00582	310 aa		5.2	□□□□□ -1.58
YTA6	YPL074W	YPL277C	Q08989	487 aa		5.2	□□□□□ -1.58
YTA6	YPL074W	ACF2	Q12168	779 aa		5.2	□□□□□ -1.58
YTA6	YPL074W	NCR1	Q12200	1170 aa		5.2	□□□□□ -1.58
YTA6	YPL074W	ILS1	P09436	1072 aa	Known RBP	5.19	□□□□□ -1.58
YTA6	YPL074W	DSF1	P0CX08	502 aa		5.19	□□□□□ -1.58
YTA6	YPL074W	YNR073C	P0CX09	502 aa		5.19	□□□□□ -1.58
YTA6	YPL074W	RAD53	P22216	821 aa		5.19	□□□□□ -1.58
YTA6	YPL074W	UBA1	P22515	1024 aa	Known RBP	5.19	□□□□□ -1.58
YTA6	YPL074W	SCJ1	P25303	377 aa		5.19	□□□□□ -1.58
YTA6	YPL074W	SMY1	P32364	656 aa	Known RBP	5.19	□□□□□ -1.58
YTA6	YPL074W	GYP6	P32806	458 aa		5.19	□□□□□ -1.58
YTA6	YPL074W	MIA40	P36046	403 aa		5.19	□□□□□ -1.58
YTA6	YPL074W	SWC5	P38326	303 aa		5.19	□□□□□ -1.58
YTA6	YPL074W	MEF2	P39677	819 aa		5.19	□□□□□ -1.58
YTA6	YPL074W	FCY21	P40039	528 aa		5.19	□□□□□ -1.58
YTA6	YPL074W	MDJ2	P42834	146 aa		5.19	□□□□□ -1.58
YTA6	YPL074W	UBP6	P43593	499 aa	Known RBP	5.19	□□□□□ -1.58
YTA6	YPL074W	HFM1	P51979	1187 aa		5.19	□□□□□ -1.58
YTA6	YPL074W	MAL13	P53338	473 aa		5.19	□□□□□ -1.58
YTA6	YPL074W	ATP25	Q03153	612 aa		5.19	□□□□□ -1.58
YTA6	YPL074W	TMA64	Q04600	565 aa	Known RBP	5.19	□□□□□ -1.58
YTA6	YPL074W	ARV1	Q06541	321 aa		5.19	□□□□□ -1.58
YTA6	YPL074W	VPS36	Q06696	566 aa		5.19	□□□□□ -1.58
YTA6	YPL074W	SYO1	Q07395	620 aa		5.19	□□□□□ -1.58
YTA6	YPL074W	YOR352W	Q08816	343 aa		5.19	□□□□□ -1.58
YTA6	YPL074W	ADE6	P38972	1358 aa	Known RBP	5.19	□□□□□ -1.58
YTA6	YPL074W	PGK1	P00560	416 aa	Known RBP	5.18	□□□□□ -1.58
YTA6	YPL074W	ENO2	P00925	437 aa	Known RBP	5.18	□□□□□ -1.58
YTA6	YPL074W	PRP4	P20053	465 aa	Known RBP	5.18	□□□□□ -1.58
YTA6	YPL074W	OSM1	P21375	501 aa	Known RBP	5.18	□□□□□ -1.58
YTA6	YPL074W	YCR016W	P25617	290 aa	Known RBP	5.18	□□□□□ -1.58
YTA6	YPL074W	PWP2	P25635	923 aa	Known RBP	5.18	□□□□□ -1.58
YTA6	YPL074W	PPH3	P32345	308 aa		5.18	□□□□□ -1.58
YTA6	YPL074W	SMI1	P32566	505 aa		5.18	□□□□□ -1.58
YTA6	YPL074W	AFG2	P32794	780 aa		5.18	□□□□□ -1.58
YTA6	YPL074W	SLX5	P32828	619 aa	Known RBP	5.18	□□□□□ -1.58
YTA6	YPL074W	STO1	P34160	861 aa	Known RBP	5.18	□□□□□ -1.58
YTA6	YPL074W	RTT105	P40063	208 aa		5.18	□□□□□ -1.58
YTA6	YPL074W	RIC1	P40395	1056 aa		5.18	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 70.6 ms