RNA–Protein interactions for RNA: YOR132W

VPS17, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS17, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS17YOR132W NIT1P40447 199 aa4.79□□□□□ -1.64
VPS17YOR132W RRT14P40470 206 aa4.79□□□□□ -1.64
VPS17YOR132W SNO2P53823 222 aa4.79□□□□□ -1.64
VPS17YOR132W YDL177CQ12257 170 aa4.79□□□□□ -1.64
VPS17YOR132W HIR3P47171 1648 aa4.78□□□□□ -1.64
VPS17YOR132W BI4P03879 638 aa4.78□□□□□ -1.64
VPS17YOR132W MBP1P39678 833 aa4.78□□□□□ -1.64
VPS17YOR132W SPF1P39986 1215 aaKnown RBP4.78□□□□□ -1.64
VPS17YOR132W PRP43P53131 767 aaKnown RBP4.78□□□□□ -1.64
VPS17YOR132W MRPL22P53881 309 aa4.78□□□□□ -1.64
VPS17YOR132W YOR352WQ08816 343 aa4.78□□□□□ -1.64
VPS17YOR132W SSF2Q12153 453 aaPredicted RBP4.78□□□□□ -1.64
VPS17YOR132W KIN2P13186 1147 aaKnown RBP4.77□□□□□ -1.65
VPS17YOR132W ACE2P21192 770 aa4.77□□□□□ -1.65
VPS17YOR132W GAS1P22146 559 aaKnown RBP4.77□□□□□ -1.65
VPS17YOR132W ABZ1P37254 787 aaPredicted RBP4.77□□□□□ -1.65
VPS17YOR132W MAP1Q01662 387 aaKnown RBP RIP-Chip data4.77□□□□□ -1.65not detected
VPS17YOR132W SWR1Q05471 1514 aa4.77□□□□□ -1.65
VPS17YOR132W PBY1P38254 753 aa4.77□□□□□ -1.65
VPS17YOR132W IRR1P40541 1150 aa4.77□□□□□ -1.65
VPS17YOR132W IRC24P40580 263 aa4.77□□□□□ -1.65
VPS17YOR132W XRN1P22147 1528 aaKnown RBP4.76□□□□□ -1.65
VPS17YOR132W CYC1P00044 109 aaPredicted RBP4.76□□□□□ -1.65
VPS17YOR132W GRX1P25373 110 aaKnown RBP4.76□□□□□ -1.65
VPS17YOR132W APL1P27351 700 aa4.76□□□□□ -1.65
VPS17YOR132W TSA1P34760 196 aaKnown RBP4.76□□□□□ -1.65
VPS17YOR132W SRP1Q02821 542 aaKnown RBP4.76□□□□□ -1.65
VPS17YOR132W YLL058WQ12198 575 aa4.76□□□□□ -1.65
VPS17YOR132W RNQ1P25367 405 aa4.75□□□□□ -1.65
VPS17YOR132W SGD1Q06132 899 aa4.75□□□□□ -1.65
VPS17YOR132W CDA2Q06703 312 aa4.75□□□□□ -1.65
VPS17YOR132W SAH1P39954 449 aaKnown RBP4.74□□□□□ -1.65
VPS17YOR132W NAN1Q02931 896 aaKnown RBP4.74□□□□□ -1.65
VPS17YOR132W HRQ1Q05549 1077 aa4.74□□□□□ -1.65
VPS17YOR132W YKL151CP36059 337 aa4.73□□□□□ -1.65
VPS17YOR132W YBR184WP38299 523 aa4.73□□□□□ -1.65
VPS17YOR132W YJL049WP47048 450 aa4.73□□□□□ -1.65
VPS17YOR132W HFM1P51979 1187 aa4.73□□□□□ -1.65
VPS17YOR132W MTC3P53077 123 aa4.73□□□□□ -1.65
VPS17YOR132W DUS3Q06053 668 aaKnown RBP4.73□□□□□ -1.65
VPS17YOR132W OSW2Q12202 724 aa4.73□□□□□ -1.65
VPS17YOR132W CMP2P14747 604 aa4.73□□□□□ -1.65
VPS17YOR132W STE5P32917 917 aa4.73□□□□□ -1.65
VPS17YOR132W LAM1P38851 1228 aa4.73□□□□□ -1.65
VPS17YOR132W GUS1P46655 708 aaKnown RBP RIP-Chip data4.73□□□□□ -1.65not detected
VPS17YOR132W SIZ1Q04195 904 aa4.73□□□□□ -1.65
VPS17YOR132W SPO75Q07798 868 aa4.73□□□□□ -1.65
VPS17YOR132W MDM38Q08179 573 aa4.73□□□□□ -1.65
VPS17YOR132W RIB2Q12362 591 aaKnown RBP4.73□□□□□ -1.65
VPS17YOR132W GAL10P04397 699 aa4.72□□□□□ -1.65
VPS17YOR132W PRP9P19736 530 aaKnown RBP4.72□□□□□ -1.65
VPS17YOR132W SCT1P32784 759 aa4.72□□□□□ -1.65
VPS17YOR132W AIM3P38266 947 aaKnown RBP4.72□□□□□ -1.65
VPS17YOR132W UBP5P39944 805 aa4.72□□□□□ -1.65
VPS17YOR132W TPO2P53283 614 aa4.72□□□□□ -1.65
VPS17YOR132W MSC2Q03455 724 aa4.72□□□□□ -1.65
VPS17YOR132W YDR306CQ06640 478 aa4.72□□□□□ -1.65
VPS17YOR132W VTS1Q08831 523 aaKnown RBP RIP-Chip data4.72□□□□□ -1.65not detected
VPS17YOR132W RPS13P05756 151 aaKnown RBP4.71□□□□□ -1.66
VPS17YOR132W PRP6P19735 899 aaPredicted RBP4.71□□□□□ -1.66
VPS17YOR132W CDC12P32468 407 aaKnown RBP4.71□□□□□ -1.66
VPS17YOR132W NNF1P47149 201 aa4.71□□□□□ -1.66
VPS17YOR132W RIM8P53179 542 aa4.71□□□□□ -1.66
VPS17YOR132W SOD2P00447 233 aa4.7□□□□□ -1.66
VPS17YOR132W SRM1P21827 482 aa4.7□□□□□ -1.66
VPS17YOR132W PPH3P32345 308 aa4.7□□□□□ -1.66
VPS17YOR132W AAR2P32357 355 aaPredicted RBP4.7□□□□□ -1.66
VPS17YOR132W TAT2P38967 592 aa4.7□□□□□ -1.66
VPS17YOR132W MEF2P39677 819 aa4.7□□□□□ -1.66
VPS17YOR132W PBP1P53297 722 aaKnown RBP4.7□□□□□ -1.66
VPS17YOR132W SRT1Q03175 343 aa4.7□□□□□ -1.66
VPS17YOR132W ROT1Q03691 256 aa4.7□□□□□ -1.66
VPS17YOR132W FMP25Q08023 583 aa4.7□□□□□ -1.66
VPS17YOR132W YPL277CQ08989 487 aa4.7□□□□□ -1.66
VPS17YOR132W REV3P14284 1504 aa4.7□□□□□ -1.66
VPS17YOR132W ADE8P04161 214 aa4.7□□□□□ -1.66
VPS17YOR132W FUN30P31380 1131 aa4.7□□□□□ -1.66
VPS17YOR132W RAD4P14736 754 aa4.69□□□□□ -1.66
VPS17YOR132W GIC1P38785 314 aa4.69□□□□□ -1.66
VPS17YOR132W YAP1801P38856 637 aa4.69□□□□□ -1.66
VPS17YOR132W PFD1P46988 109 aa4.69□□□□□ -1.66
VPS17YOR132W UTP8P53276 713 aaKnown RBP4.69□□□□□ -1.66
VPS17YOR132W GCN5Q03330 439 aa4.69□□□□□ -1.66
VPS17YOR132W PLB2Q03674 706 aa4.69□□□□□ -1.66
VPS17YOR132W EAF1Q06337 982 aa4.69□□□□□ -1.66
VPS17YOR132W OSH2Q12451 1283 aa4.69□□□□□ -1.66
VPS17YOR132W RPL8BP29453 256 aaKnown RBP4.68□□□□□ -1.66
VPS17YOR132W GYP7P48365 746 aa4.68□□□□□ -1.66
VPS17YOR132W ERP6P53198 216 aa4.68□□□□□ -1.66
VPS17YOR132W XYL2Q07993 356 aa4.68□□□□□ -1.66
VPS17YOR132W CDC11P32458 415 aa4.67□□□□□ -1.66
VPS17YOR132W THI80P35202 319 aa4.67□□□□□ -1.66
VPS17YOR132W YKR078WP36158 585 aaKnown RBP4.67□□□□□ -1.66
VPS17YOR132W ECM21P38167 1117 aaKnown RBP4.67□□□□□ -1.66
VPS17YOR132W SIT1P39980 628 aa4.67□□□□□ -1.66
VPS17YOR132W ZRG8P40021 1076 aa4.67□□□□□ -1.66
VPS17YOR132W ALR2P43553 858 aa4.67□□□□□ -1.66
VPS17YOR132W TIM54P47045 478 aa4.67□□□□□ -1.66
VPS17YOR132W SPT20P50875 604 aa4.67□□□□□ -1.66
VPS17YOR132W YDR132CQ03900 495 aa4.67□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 69.9 ms