RNA–Protein interactions for RNA: YOL112W

MSB4, Transcript of GTPase-activating protein of the Ras superfamily, yeast

Gene MSB4, Length 1,479 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB4	YOL112W	RTP1	Q12751	981 aa		10.67	□□□□□ -0.7
MSB4	YOL112W	HIS4	P00815	799 aa	Known RBP	10.66	□□□□□ -0.7
MSB4	YOL112W	VPS24	P36095	224 aa	Known RBP	10.66	□□□□□ -0.7
MSB4	YOL112W	PIH1	P38768	344 aa		10.66	□□□□□ -0.7
MSB4	YOL112W	VPS72	Q03388	795 aa		10.66	□□□□□ -0.7
MSB4	YOL112W	MSC2	Q03455	724 aa		10.66	□□□□□ -0.7
MSB4	YOL112W	COG8	Q04632	607 aa		10.66	□□□□□ -0.7
MSB4	YOL112W	SRD1	P09007	221 aa		10.65	□□□□□ -0.7
MSB4	YOL112W	HYR1	P40581	163 aa	Known RBP	10.65	□□□□□ -0.7
MSB4	YOL112W	ROG3	P43602	733 aa		10.65	□□□□□ -0.7
MSB4	YOL112W	CUE3	P53137	624 aa	Known RBP	10.65	□□□□□ -0.7
MSB4	YOL112W	FUS2	Q05670	677 aa		10.65	□□□□□ -0.7
MSB4	YOL112W	RFT1	P38206	574 aa	Predicted RBP	10.64	□□□□□ -0.71
MSB4	YOL112W	THI6	P41835	540 aa		10.64	□□□□□ -0.71
MSB4	YOL112W	SAD1	P43589	448 aa		10.64	□□□□□ -0.71
MSB4	YOL112W	PSP2	P50109	593 aa	Known RBP	10.64	□□□□□ -0.71
MSB4	YOL112W	YPL034W	Q03083	165 aa		10.64	□□□□□ -0.71
MSB4	YOL112W	DED1	P06634	604 aa	Known RBP	10.63	□□□□□ -0.71
MSB4	YOL112W	SNA3	P14359	133 aa		10.63	□□□□□ -0.71
MSB4	YOL112W	IRE1	P32361	1115 aa		10.63	□□□□□ -0.71
MSB4	YOL112W	SIP3	P38717	1229 aa		10.63	□□□□□ -0.71
MSB4	YOL112W	CIR1	P42940	261 aa		10.63	□□□□□ -0.71
MSB4	YOL112W	PSR2	Q07949	397 aa		10.63	□□□□□ -0.71
MSB4	YOL112W	YDR524C-B	Q3E6R4	66 aa		10.63	□□□□□ -0.71
MSB4	YOL112W	UBR2	Q07963	1872 aa		10.63	□□□□□ -0.71
MSB4	YOL112W	MIP1	P15801	1254 aa		10.62	□□□□□ -0.71
MSB4	YOL112W	CKA2	P19454	339 aa		10.62	□□□□□ -0.71
MSB4	YOL112W	ISY1	P21374	235 aa	Predicted RBP	10.62	□□□□□ -0.71
MSB4	YOL112W	MDR1	P53258	950 aa		10.62	□□□□□ -0.71
MSB4	YOL112W	BMH1	P29311	267 aa	Known RBP	10.61	□□□□□ -0.71
MSB4	YOL112W	IME2	P32581	645 aa		10.61	□□□□□ -0.71
MSB4	YOL112W	ELM1	P32801	640 aa		10.61	□□□□□ -0.71
MSB4	YOL112W	GUP1	P53154	560 aa		10.61	□□□□□ -0.71
MSB4	YOL112W	FOB1	O13329	566 aa		10.61	□□□□□ -0.71
MSB4	YOL112W	PFK1	P16861	987 aa	Known RBP	10.61	□□□□□ -0.71
MSB4	YOL112W	RAM2	P29703	316 aa		10.61	□□□□□ -0.71
MSB4	YOL112W	RME1	P32338	300 aa	Known RBP	10.61	□□□□□ -0.71
MSB4	YOL112W	SMY2	P32909	740 aa	Known RBP	10.61	□□□□□ -0.71
MSB4	YOL112W	DUR3	P33413	735 aa		10.61	□□□□□ -0.71
MSB4	YOL112W	FIR1	P40020	876 aa		10.61	□□□□□ -0.71
MSB4	YOL112W	CCT5	P40413	562 aa	Known RBP	10.61	□□□□□ -0.71
MSB4	YOL112W	KEX1	P09620	729 aa		10.6	□□□□□ -0.71
MSB4	YOL112W	PGM2	P37012	569 aa	Known RBP	10.6	□□□□□ -0.71
MSB4	YOL112W	RPN3	P40016	523 aa	Known RBP	10.6	□□□□□ -0.71
MSB4	YOL112W	NUP82	P40368	713 aa		10.6	□□□□□ -0.71
MSB4	YOL112W	INP51	P40559	946 aa	Known RBP	10.6	□□□□□ -0.71
MSB4	YOL112W	AZR1	P50080	613 aa		10.6	□□□□□ -0.71
MSB4	YOL112W	ARK1	P53974	638 aa		10.6	□□□□□ -0.71
MSB4	YOL112W	HAP5	Q02516	242 aa		10.6	□□□□□ -0.71
MSB4	YOL112W	ROD1	Q02805	837 aa		10.6	□□□□□ -0.71
MSB4	YOL112W	YML020W	Q03722	664 aa		10.6	□□□□□ -0.71
MSB4	YOL112W	COQ9	Q05779	260 aa		10.6	□□□□□ -0.71
MSB4	YOL112W	APC11	Q12157	165 aa		10.6	□□□□□ -0.71
MSB4	YOL112W	DDP1	Q99321	188 aa	Known RBP	10.6	□□□□□ -0.71
MSB4	YOL112W	UBC1	P21734	215 aa	Known RBP	10.59	□□□□□ -0.71
MSB4	YOL112W	CDC15	P27636	974 aa		10.59	□□□□□ -0.71
MSB4	YOL112W	HIR1	P32479	840 aa		10.59	□□□□□ -0.71
MSB4	YOL112W	ERC1	P38767	581 aa		10.59	□□□□□ -0.71
MSB4	YOL112W	FYV10	P40492	516 aa		10.59	□□□□□ -0.71
MSB4	YOL112W	AVT1	P47082	602 aa		10.59	□□□□□ -0.71
MSB4	YOL112W	NCS2	P53923	493 aa	Predicted RBP	10.59	□□□□□ -0.71
MSB4	YOL112W	FMP30	Q02883	468 aa		10.59	□□□□□ -0.71
MSB4	YOL112W	VMS1	Q04311	632 aa	Known RBP	10.59	□□□□□ -0.71
MSB4	YOL112W	YDL057W	Q07379	328 aa		10.59	□□□□□ -0.71
MSB4	YOL112W	SMC5	Q08204	1093 aa		10.59	□□□□□ -0.71
MSB4	YOL112W	TCP1	P12612	559 aa	Known RBP	10.58	□□□□□ -0.72
MSB4	YOL112W	EFT1	P32324	842 aa	Known RBP	10.58	□□□□□ -0.72
MSB4	YOL112W	TVP23	P38962	199 aa		10.58	□□□□□ -0.72
MSB4	YOL112W	YER130C	P39959	443 aa		10.58	□□□□□ -0.72
MSB4	YOL112W	EAF5	P39995	279 aa		10.58	□□□□□ -0.72
MSB4	YOL112W	ACF4	P47129	309 aa		10.58	□□□□□ -0.72
MSB4	YOL112W	NOC3	Q07896	663 aa	Predicted RBP	10.58	□□□□□ -0.72
MSB4	YOL112W	GPA1	P08539	472 aa		10.57	□□□□□ -0.72
MSB4	YOL112W	AFT1	P22149	690 aa		10.57	□□□□□ -0.72
MSB4	YOL112W	POT1	P27796	417 aa	Known RBP RIP-Chip data	10.57	□□□□□ -0.72	not detected
MSB4	YOL112W	DID4	P36108	232 aa		10.57	□□□□□ -0.72
MSB4	YOL112W	PPS1	P38148	807 aa		10.57	□□□□□ -0.72
MSB4	YOL112W	VTC2	P43585	828 aa		10.57	□□□□□ -0.72
MSB4	YOL112W	SGM1	P47166	707 aa		10.57	□□□□□ -0.72
MSB4	YOL112W	YPT11	P48559	417 aa		10.57	□□□□□ -0.72
MSB4	YOL112W	LDB19	Q12502	818 aa		10.57	□□□□□ -0.72
MSB4	YOL112W	HEM1	P09950	548 aa	Predicted RBP	10.56	□□□□□ -0.72
MSB4	YOL112W	MSP1	P28737	362 aa		10.56	□□□□□ -0.72
MSB4	YOL112W	ATG19	P35193	415 aa		10.56	□□□□□ -0.72
MSB4	YOL112W	CLA4	P48562	842 aa		10.56	□□□□□ -0.72
MSB4	YOL112W	YNL115C	P53925	644 aa		10.56	□□□□□ -0.72
MSB4	YOL112W	MSS51	P32335	436 aa		10.55	□□□□□ -0.72
MSB4	YOL112W	YKT6	P36015	200 aa	Known RBP	10.55	□□□□□ -0.72
MSB4	YOL112W	GUA1	P38625	525 aa	Known RBP	10.55	□□□□□ -0.72
MSB4	YOL112W	YFL040W	P43562	540 aa		10.55	□□□□□ -0.72
MSB4	YOL112W	CUS1	Q02554	436 aa	Predicted RBP	10.55	□□□□□ -0.72
MSB4	YOL112W	AVT3	P36062	692 aa		10.55	□□□□□ -0.72
MSB4	YOL112W	RVS167	P39743	482 aa	Known RBP	10.55	□□□□□ -0.72
MSB4	YOL112W	TPO2	P53283	614 aa		10.55	□□□□□ -0.72
MSB4	YOL112W	TOF1	P53840	1238 aa		10.55	□□□□□ -0.72
MSB4	YOL112W	AIM44	Q99299	758 aa		10.55	□□□□□ -0.72
MSB4	YOL112W	TRS33	Q99394	268 aa		10.55	□□□□□ -0.72
MSB4	YOL112W	DBP5	P20449	482 aa	Known RBP	10.54	□□□□□ -0.72
MSB4	YOL112W	SAC6	P32599	642 aa	Known RBP	10.54	□□□□□ -0.72
MSB4	YOL112W	WHI3	P34761	661 aa	Known RBP	10.54	□□□□□ -0.72

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms