RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W GPP2P40106 250 aaKnown RBP3.67□□□□□ -1.82
MSH2YOL090W MNT3P40549 630 aa3.67□□□□□ -1.82
MSH2YOL090W ALA1P40825 983 aaKnown RBP3.67□□□□□ -1.82
MSH2YOL090W SUM1P46676 1062 aa3.67□□□□□ -1.82
MSH2YOL090W GIC2Q06648 383 aa3.67□□□□□ -1.82
MSH2YOL090W GRC3Q07845 632 aa3.67□□□□□ -1.82
MSH2YOL090W TRE2Q08693 809 aa3.67□□□□□ -1.82
MSH2YOL090W ULS1Q08562 1619 aa3.67□□□□□ -1.82
MSH2YOL090W ECM32P32644 1121 aaKnown RBP3.66□□□□□ -1.82
MSH2YOL090W CCC2P38995 1004 aa3.66□□□□□ -1.82
MSH2YOL090W IRC3Q06683 689 aa3.66□□□□□ -1.82
MSH2YOL090W MYO4P32492 1471 aa3.66□□□□□ -1.82
MSH2YOL090W GDB1Q06625 1536 aa3.66□□□□□ -1.82
MSH2YOL090W MLP2P40457 1679 aa3.66□□□□□ -1.82
MSH2YOL090W RPC31P17890 251 aa3.66□□□□□ -1.82
MSH2YOL090W VBA3P25594 458 aa3.66□□□□□ -1.82
MSH2YOL090W MLF3P32047 452 aa3.66□□□□□ -1.82
MSH2YOL090W HBS1P32769 611 aaKnown RBP3.66□□□□□ -1.82
MSH2YOL090W NIC96P34077 839 aa3.66□□□□□ -1.82
MSH2YOL090W IRS4P36115 615 aaKnown RBP3.66□□□□□ -1.82
MSH2YOL090W NUT1P53114 1132 aa3.66□□□□□ -1.82
MSH2YOL090W YPL066WQ12194 479 aa3.66□□□□□ -1.82
MSH2YOL090W HBN1Q96VH4 193 aa3.66□□□□□ -1.82
MSH2YOL090W VTH1P40438 1549 aa3.66□□□□□ -1.82
MSH2YOL090W VTH2P40890 1549 aa3.66□□□□□ -1.82
MSH2YOL090W GFD2P25370 566 aaKnown RBP3.65□□□□□ -1.82
MSH2YOL090W MKS1P34072 584 aa3.65□□□□□ -1.82
MSH2YOL090W NPY1P53164 384 aa3.65□□□□□ -1.82
MSH2YOL090W HEH2Q03281 663 aa3.65□□□□□ -1.82
MSH2YOL090W POL1P13382 1468 aa3.65□□□□□ -1.82
MSH2YOL090W MCM1P11746 286 aa3.65□□□□□ -1.83
MSH2YOL090W PAT1P25644 796 aaKnown RBP3.65□□□□□ -1.83
MSH2YOL090W DAL3P32459 195 aa3.65□□□□□ -1.83
MSH2YOL090W TFC3P34111 1160 aa3.65□□□□□ -1.83
MSH2YOL090W SCD5P34758 872 aa3.65□□□□□ -1.83
MSH2YOL090W MOT2P34909 587 aaKnown RBP3.65□□□□□ -1.83
MSH2YOL090W GEM1P39722 662 aa3.65□□□□□ -1.83
MSH2YOL090W MTR4P47047 1073 aaKnown RBP3.65□□□□□ -1.83
MSH2YOL090W YOR1P53049 1477 aa3.65□□□□□ -1.83
MSH2YOL090W MSS18P08593 268 aa3.65□□□□□ -1.83
MSH2YOL090W KAR2P16474 682 aaKnown RBP3.65□□□□□ -1.83
MSH2YOL090W KCC4P25389 1037 aa3.65□□□□□ -1.83
MSH2YOL090W URA1P28272 314 aaPredicted RBP3.65□□□□□ -1.83
MSH2YOL090W MBP1P39678 833 aa3.65□□□□□ -1.83
MSH2YOL090W ERR3P42222 437 aa3.65□□□□□ -1.83
MSH2YOL090W SRB7P47822 140 aa3.65□□□□□ -1.83
MSH2YOL090W MET13P53128 600 aa3.65□□□□□ -1.83
MSH2YOL090W PBP1P53297 722 aaKnown RBP3.65□□□□□ -1.83
MSH2YOL090W HOL1P53389 586 aa3.65□□□□□ -1.83
MSH2YOL090W SNP1Q00916 300 aaPredicted RBP3.65□□□□□ -1.83
MSH2YOL090W HFD1Q04458 532 aa3.65□□□□□ -1.83
MSH2YOL090W SDH5Q08230 162 aa3.65□□□□□ -1.83
MSH2YOL090W PCL2P25693 308 aa3.64□□□□□ -1.83
MSH2YOL090W LYP1P32487 611 aa3.64□□□□□ -1.83
MSH2YOL090W DSS1P39112 969 aa3.64□□□□□ -1.83
MSH2YOL090W TAF1P46677 1066 aa3.64□□□□□ -1.83
MSH2YOL090W NIT2P47016 307 aa3.64□□□□□ -1.83
MSH2YOL090W YGL140CP53120 1219 aa3.64□□□□□ -1.83
MSH2YOL090W CIA1Q05583 330 aa3.64□□□□□ -1.83
MSH2YOL090W MLC2Q06580 163 aa3.64□□□□□ -1.83
MSH2YOL090W YDL124WQ07551 312 aaKnown RBP3.64□□□□□ -1.83
MSH2YOL090W MED1Q12321 566 aa3.64□□□□□ -1.83
MSH2YOL090W SEC23P15303 768 aaKnown RBP3.64□□□□□ -1.83
MSH2YOL090W PRP5P21372 849 aaPredicted RBP3.64□□□□□ -1.83
MSH2YOL090W IMP2'P32351 346 aa3.64□□□□□ -1.83
MSH2YOL090W LDH1P38139 375 aa3.64□□□□□ -1.83
MSH2YOL090W BSD2P38356 321 aa3.64□□□□□ -1.83
MSH2YOL090W SAP185P40856 1058 aa3.64□□□□□ -1.83
MSH2YOL090W MSH6Q03834 1242 aa3.64□□□□□ -1.83
MSH2YOL090W SXM1Q04175 944 aaKnown RBP3.64□□□□□ -1.83
MSH2YOL090W PSR2Q07949 397 aa3.64□□□□□ -1.83
MSH2YOL090W Q0182Q9ZZW1 134 aa3.64□□□□□ -1.83
MSH2YOL090W PTH2P34222 208 aa3.63□□□□□ -1.83
MSH2YOL090W PAN5P38787 379 aa3.63□□□□□ -1.83
MSH2YOL090W QDR2P40474 542 aa3.63□□□□□ -1.83
MSH2YOL090W HIS6P40545 261 aa3.63□□□□□ -1.83
MSH2YOL090W YJR096WP47137 282 aa3.63□□□□□ -1.83
MSH2YOL090W GRX3Q03835 250 aa3.63□□□□□ -1.83
MSH2YOL090W HED1Q03937 162 aa3.63□□□□□ -1.83
MSH2YOL090W TY1B-NL2Q99337 1749 aaKnown RBP3.63□□□□□ -1.83
MSH2YOL090W CDC9P04819 755 aa3.63□□□□□ -1.83
MSH2YOL090W SRD1P09007 221 aa3.63□□□□□ -1.83
MSH2YOL090W RRN3P36070 627 aa3.63□□□□□ -1.83
MSH2YOL090W JNM1P36224 373 aa3.63□□□□□ -1.83
MSH2YOL090W SAP155P43612 1002 aa3.63□□□□□ -1.83
MSH2YOL090W MEP3P53390 489 aa3.63□□□□□ -1.83
MSH2YOL090W TRS130Q03660 1102 aa3.63□□□□□ -1.83
MSH2YOL090W APE4P38821 490 aa3.62□□□□□ -1.83
MSH2YOL090W SIW14P53965 281 aa3.62□□□□□ -1.83
MSH2YOL090W BUL2Q03758 920 aaKnown RBP3.62□□□□□ -1.83
MSH2YOL090W NEW1Q08972 1196 aaKnown RBP3.62□□□□□ -1.83
MSH2YOL090W SPP41P38904 1435 aa3.62□□□□□ -1.83
MSH2YOL090W TY1B-AO13527 1196 aaKnown RBP3.62□□□□□ -1.83
MSH2YOL090W AMS1P22855 1083 aa3.62□□□□□ -1.83
MSH2YOL090W CHS3P29465 1165 aa3.62□□□□□ -1.83
MSH2YOL090W ABZ1P37254 787 aaPredicted RBP3.62□□□□□ -1.83
MSH2YOL090W RDH54P38086 958 aa3.62□□□□□ -1.83
MSH2YOL090W YBR284WP38150 797 aa3.62□□□□□ -1.83
MSH2YOL090W PEX28P38848 579 aa3.62□□□□□ -1.83
MSH2YOL090W VPS8P39702 1274 aa3.62□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms