RNA–Protein interactions for RNA: YNL329C

PEX6, Transcript of AAA-peroxin, yeast

Gene PEX6, Length 3,093 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX6	YNL329C	ALG2	P43636	503 aa		4.13	□□□□□ -1.75
PEX6	YNL329C	YNR014W	P53719	212 aa		4.13	□□□□□ -1.75
PEX6	YNL329C	DSE4	P53753	1117 aa		4.13	□□□□□ -1.75
PEX6	YNL329C	YNL193W	P53870	558 aa		4.13	□□□□□ -1.75
PEX6	YNL329C	THI73	Q07904	523 aa		4.13	□□□□□ -1.75
PEX6	YNL329C	RPL11B	Q3E757	174 aa	Predicted RBP	4.13	□□□□□ -1.75
PEX6	YNL329C	MON2	P48563	1636 aa	Predicted RBP	4.13	□□□□□ -1.75
PEX6	YNL329C	MEF1	P25039	761 aa		4.13	□□□□□ -1.75
PEX6	YNL329C	YJL045W	P47052	634 aa		4.13	□□□□□ -1.75
PEX6	YNL329C	YPR196W	Q06595	470 aa		4.13	□□□□□ -1.75
PEX6	YNL329C	HRK1	Q08732	759 aa	Known RBP	4.13	□□□□□ -1.75
PEX6	YNL329C	PMT3	P47190	753 aa		4.12	□□□□□ -1.75
PEX6	YNL329C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
PEX6	YNL329C	DBP2	P24783	546 aa	Known RBP	4.12	□□□□□ -1.75
PEX6	YNL329C	PRO1	P32264	428 aa		4.12	□□□□□ -1.75
PEX6	YNL329C	NIT1	P40447	199 aa		4.12	□□□□□ -1.75
PEX6	YNL329C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
PEX6	YNL329C	NNK1	P36003	928 aa		4.11	□□□□□ -1.75
PEX6	YNL329C	PNT1	P38969	423 aa		4.11	□□□□□ -1.75
PEX6	YNL329C	TMA17	Q12513	150 aa		4.11	□□□□□ -1.75
PEX6	YNL329C	ACO2	P39533	789 aa		4.11	□□□□□ -1.75
PEX6	YNL329C	BOI2	P39969	1040 aa		4.11	□□□□□ -1.75
PEX6	YNL329C	UME1	Q03010	460 aa		4.11	□□□□□ -1.75
PEX6	YNL329C	LCD1	Q04377	747 aa		4.11	□□□□□ -1.75
PEX6	YNL329C	YBR238C	P38330	731 aa	Known RBP	4.1	□□□□□ -1.75
PEX6	YNL329C	ATG36	P46983	293 aa		4.1	□□□□□ -1.75
PEX6	YNL329C	GAS5	Q08193	484 aa		4.1	□□□□□ -1.75
PEX6	YNL329C	TYS1	P36421	394 aa	Known RBP	4.1	□□□□□ -1.75
PEX6	YNL329C	TOK1	P40310	691 aa		4.1	□□□□□ -1.75
PEX6	YNL329C	YFL054C	P43549	646 aa		4.1	□□□□□ -1.75
PEX6	YNL329C	RSB1	Q08417	382 aa		4.1	□□□□□ -1.75
PEX6	YNL329C	PER1	P25625	357 aa		4.1	□□□□□ -1.75
PEX6	YNL329C	UGA2	P38067	497 aa		4.1	□□□□□ -1.75
PEX6	YNL329C	BAP2	P38084	609 aa		4.1	□□□□□ -1.75
PEX6	YNL329C	YJR120W	P47157	116 aa		4.1	□□□□□ -1.75
PEX6	YNL329C	CDC9	P04819	755 aa		4.09	□□□□□ -1.75
PEX6	YNL329C	SMY2	P32909	740 aa	Known RBP	4.09	□□□□□ -1.75
PEX6	YNL329C	REC104	P33323	182 aa		4.09	□□□□□ -1.75
PEX6	YNL329C	MAL11	P53048	616 aa		4.09	□□□□□ -1.75
PEX6	YNL329C	HOS3	Q02959	697 aa	Known RBP	4.09	□□□□□ -1.75
PEX6	YNL329C	SPA2	P23201	1466 aa	Known RBP	4.09	□□□□□ -1.75
PEX6	YNL329C	TOP1	P04786	769 aa		4.09	□□□□□ -1.75
PEX6	YNL329C	NIT3	P49954	291 aa		4.09	□□□□□ -1.75
PEX6	YNL329C	ACM1	Q08981	209 aa		4.09	□□□□□ -1.75
PEX6	YNL329C	RPS4A	P0CX35	261 aa	Known RBP	4.08	□□□□□ -1.76
PEX6	YNL329C	RPS4B	P0CX36	261 aa	Known RBP	4.08	□□□□□ -1.76
PEX6	YNL329C	TNA1	P53322	534 aa		4.08	□□□□□ -1.76
PEX6	YNL329C	HRQ1	Q05549	1077 aa		4.08	□□□□□ -1.76
PEX6	YNL329C	COQ4	O13525	335 aa		4.08	□□□□□ -1.76
PEX6	YNL329C	DOT6	P40059	670 aa	Known RBP	4.08	□□□□□ -1.76
PEX6	YNL329C	DAS1	P47005	663 aa		4.08	□□□□□ -1.76
PEX6	YNL329C	YDR514C	Q04408	483 aa		4.08	□□□□□ -1.76
PEX6	YNL329C	NYV1	Q12255	253 aa		4.08	□□□□□ -1.76
PEX6	YNL329C	RFA1	P22336	621 aa	Known RBP	4.08	□□□□□ -1.76
PEX6	YNL329C	PRP19	P32523	503 aa	Known RBP	4.08	□□□□□ -1.76
PEX6	YNL329C	MDM12	Q92328	271 aa		4.08	□□□□□ -1.76
PEX6	YNL329C	YSC84	P32793	468 aa		4.07	□□□□□ -1.76
PEX6	YNL329C	SAP190	P36123	1033 aa		4.07	□□□□□ -1.76
PEX6	YNL329C	CCM1	P48237	864 aa	Predicted RBP	4.07	□□□□□ -1.76
PEX6	YNL329C	YGR035C	P53222	116 aa		4.07	□□□□□ -1.76
PEX6	YNL329C	PUS7	Q08647	676 aa	Known RBP	4.07	□□□□□ -1.76
PEX6	YNL329C	NPP1	P25353	742 aa		4.07	□□□□□ -1.76
PEX6	YNL329C	TPM2	P40414	161 aa		4.07	□□□□□ -1.76
PEX6	YNL329C	HFD1	Q04458	532 aa		4.07	□□□□□ -1.76
PEX6	YNL329C	HPF1	Q05164	967 aa		4.07	□□□□□ -1.76
PEX6	YNL329C	MRC1	P25588	1096 aa		4.06	□□□□□ -1.76
PEX6	YNL329C	CDC12	P32468	407 aa	Known RBP	4.06	□□□□□ -1.76
PEX6	YNL329C	SPC29	P33419	253 aa		4.06	□□□□□ -1.76
PEX6	YNL329C	AKR1	P39010	764 aa		4.06	□□□□□ -1.76
PEX6	YNL329C	SIT1	P39980	628 aa		4.06	□□□□□ -1.76
PEX6	YNL329C	SEC26	P41810	973 aa	Known RBP	4.06	□□□□□ -1.76
PEX6	YNL329C	GUD1	Q07729	489 aa		4.06	□□□□□ -1.76
PEX6	YNL329C	MET7	Q08645	548 aa		4.06	□□□□□ -1.76
PEX6	YNL329C	SRD1	P09007	221 aa		4.06	□□□□□ -1.76
PEX6	YNL329C	GYP8	P43570	497 aa		4.06	□□□□□ -1.76
PEX6	YNL329C	TY1A-NL1	Q12391	440 aa	Known RBP	4.06	□□□□□ -1.76
PEX6	YNL329C	BI4	P03879	638 aa		4.06	□□□□□ -1.76
PEX6	YNL329C	THS1	P04801	734 aa	Known RBP	4.06	□□□□□ -1.76
PEX6	YNL329C	YEF3	P16521	1044 aa	Known RBP	4.06	□□□□□ -1.76
PEX6	YNL329C	SFL1	P20134	766 aa		4.06	□□□□□ -1.76
PEX6	YNL329C	DAM1	P53267	343 aa		4.06	□□□□□ -1.76
PEX6	YNL329C	NCE103	P53615	221 aa		4.06	□□□□□ -1.76
PEX6	YNL329C	RSC3	Q06639	885 aa		4.06	□□□□□ -1.76
PEX6	YNL329C	RPS9A	O13516	197 aa	Known RBP	4.05	□□□□□ -1.76
PEX6	YNL329C	RSC6	P25632	483 aa		4.05	□□□□□ -1.76
PEX6	YNL329C	STO1	P34160	861 aa	Known RBP	4.05	□□□□□ -1.76
PEX6	YNL329C	WHI3	P34761	661 aa	Known RBP	4.05	□□□□□ -1.76
PEX6	YNL329C	CCZ1	P38273	704 aa		4.05	□□□□□ -1.76
PEX6	YNL329C	YER158C	P40095	573 aa		4.05	□□□□□ -1.76
PEX6	YNL329C	SBE2	P42223	864 aa	Known RBP	4.05	□□□□□ -1.76
PEX6	YNL329C	JJJ3	P47138	172 aa		4.05	□□□□□ -1.76
PEX6	YNL329C	AIM14	P53109	570 aa		4.05	□□□□□ -1.76
PEX6	YNL329C	SND1	Q04007	877 aa		4.05	□□□□□ -1.76
PEX6	YNL329C	SLA2	P33338	968 aa		4.05	□□□□□ -1.76
PEX6	YNL329C	CEP3	P40969	608 aa		4.05	□□□□□ -1.76
PEX6	YNL329C	SHR5	P41912	237 aa		4.05	□□□□□ -1.76
PEX6	YNL329C	MET13	P53128	600 aa		4.05	□□□□□ -1.76
PEX6	YNL329C	EAR1	Q03212	550 aa		4.05	□□□□□ -1.76
PEX6	YNL329C	SEC6	P32844	805 aa		4.04	□□□□□ -1.76
PEX6	YNL329C	YHL012W	P38709	493 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 87 ms