RNA–Protein interactions for RNA: YNL078W

NIS1, Transcript of Protein localized in the bud neck at G2/M phase, yeast

Gene NIS1, Length 1,224 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NIS1	YNL078W	IRR1	P40541	1150 aa		5.11	□□□□□ -1.59
NIS1	YNL078W	SEC26	P41810	973 aa	Known RBP	5.11	□□□□□ -1.59
NIS1	YNL078W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	5.11	□□□□□ -1.59	not detected
NIS1	YNL078W	HRQ1	Q05549	1077 aa		5.11	□□□□□ -1.59
NIS1	YNL078W	ATG13	Q06628	738 aa		5.11	□□□□□ -1.59
NIS1	YNL078W	TRM732	Q03496	1420 aa		5.11	□□□□□ -1.59
NIS1	YNL078W	SEG2	P34250	1132 aa		5.1	□□□□□ -1.59
NIS1	YNL078W	PBY1	P38254	753 aa		5.1	□□□□□ -1.59
NIS1	YNL078W	ETP1	P38748	585 aa	Known RBP	5.1	□□□□□ -1.59
NIS1	YNL078W	PFD1	P46988	109 aa		5.1	□□□□□ -1.59
NIS1	YNL078W	FMP25	Q08023	583 aa		5.1	□□□□□ -1.59
NIS1	YNL078W	SVS1	Q12254	260 aa		5.1	□□□□□ -1.59
NIS1	YNL078W	RAD4	P14736	754 aa		5.09	□□□□□ -1.59
NIS1	YNL078W	ACE2	P21192	770 aa		5.09	□□□□□ -1.59
NIS1	YNL078W	SNF7	P39929	240 aa	Known RBP	5.09	□□□□□ -1.59
NIS1	YNL078W	NNF1	P47149	201 aa		5.09	□□□□□ -1.59
NIS1	YNL078W	NAN1	Q02931	896 aa	Known RBP	5.09	□□□□□ -1.59
NIS1	YNL078W	RIB2	Q12362	591 aa	Known RBP	5.09	□□□□□ -1.59
NIS1	YNL078W	MON2	P48563	1636 aa	Predicted RBP	5.08	□□□□□ -1.6
NIS1	YNL078W	SRM1	P21827	482 aa		5.08	□□□□□ -1.6
NIS1	YNL078W	RPL8B	P29453	256 aa	Known RBP	5.08	□□□□□ -1.6
NIS1	YNL078W	RFC5	P38251	354 aa		5.08	□□□□□ -1.6
NIS1	YNL078W	OCA5	P38738	679 aa		5.08	□□□□□ -1.6
NIS1	YNL078W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	5.08	□□□□□ -1.6	not detected
NIS1	YNL078W	ECL1	P48235	211 aa		5.08	□□□□□ -1.6
NIS1	YNL078W	HFM1	P51979	1187 aa		5.08	□□□□□ -1.6
NIS1	YNL078W	TY1B-DR4	Q07793	1604 aa		5.08	□□□□□ -1.6
NIS1	YNL078W	HSL1	P34244	1518 aa		5.07	□□□□□ -1.6
NIS1	YNL078W	SPP41	P38904	1435 aa		5.07	□□□□□ -1.6
NIS1	YNL078W	IKI3	Q06706	1349 aa	Known RBP	5.07	□□□□□ -1.6
NIS1	YNL078W	TSA1	P34760	196 aa	Known RBP	5.07	□□□□□ -1.6
NIS1	YNL078W	IOC3	P43596	787 aa		5.07	□□□□□ -1.6
NIS1	YNL078W	FOL2	P51601	243 aa	Known RBP	5.07	□□□□□ -1.6
NIS1	YNL078W	MDM38	Q08179	573 aa		5.07	□□□□□ -1.6
NIS1	YNL078W	STH1	P32597	1359 aa		5.06	□□□□□ -1.6
NIS1	YNL078W	THS1	P04801	734 aa	Known RBP	5.06	□□□□□ -1.6
NIS1	YNL078W	CDC12	P32468	407 aa	Known RBP	5.06	□□□□□ -1.6
NIS1	YNL078W	HBS1	P32769	611 aa	Known RBP	5.06	□□□□□ -1.6
NIS1	YNL078W	SAH1	P39954	449 aa	Known RBP	5.06	□□□□□ -1.6
NIS1	YNL078W	NPP2	P39997	493 aa		5.06	□□□□□ -1.6
NIS1	YNL078W	RRT14	P40470	206 aa		5.06	□□□□□ -1.6
NIS1	YNL078W	AVT1	P47082	602 aa		5.06	□□□□□ -1.6
NIS1	YNL078W	DUS3	Q06053	668 aa	Known RBP	5.06	□□□□□ -1.6
NIS1	YNL078W	XYL2	Q07993	356 aa		5.06	□□□□□ -1.6
NIS1	YNL078W	CYC1	P00044	109 aa	Predicted RBP	5.05	□□□□□ -1.6
NIS1	YNL078W	APL1	P27351	700 aa		5.05	□□□□□ -1.6
NIS1	YNL078W	YHR020W	P38708	688 aa	Known RBP	5.05	□□□□□ -1.6
NIS1	YNL078W	GIC1	P38785	314 aa		5.05	□□□□□ -1.6
NIS1	YNL078W	YJL049W	P47048	450 aa		5.05	□□□□□ -1.6
NIS1	YNL078W	HUL5	P53119	910 aa		5.05	□□□□□ -1.6
NIS1	YNL078W	UTP8	P53276	713 aa	Known RBP	5.05	□□□□□ -1.6
NIS1	YNL078W	MRPL22	P53881	309 aa		5.05	□□□□□ -1.6
NIS1	YNL078W	PLB2	Q03674	706 aa		5.05	□□□□□ -1.6
NIS1	YNL078W	RSM24	Q03976	319 aa		5.05	□□□□□ -1.6
NIS1	YNL078W	YDR306C	Q06640	478 aa		5.05	□□□□□ -1.6
NIS1	YNL078W	CDA2	Q06703	312 aa		5.05	□□□□□ -1.6
NIS1	YNL078W	SPT7	P35177	1332 aa		5.04	□□□□□ -1.6
NIS1	YNL078W	RNQ1	P25367	405 aa		5.04	□□□□□ -1.6
NIS1	YNL078W	AFR1	P33304	620 aa		5.04	□□□□□ -1.6
NIS1	YNL078W	ALR2	P43553	858 aa		5.04	□□□□□ -1.6
NIS1	YNL078W	TIM54	P47045	478 aa		5.04	□□□□□ -1.6
NIS1	YNL078W	NSE3	Q05541	303 aa		5.04	□□□□□ -1.6
NIS1	YNL078W	UBX5	Q06682	500 aa		5.04	□□□□□ -1.6
NIS1	YNL078W	BDF2	Q07442	638 aa		5.04	□□□□□ -1.6
NIS1	YNL078W	SPO75	Q07798	868 aa		5.04	□□□□□ -1.6
NIS1	YNL078W	YLL058W	Q12198	575 aa		5.04	□□□□□ -1.6
NIS1	YNL078W	YOL098C	Q12496	1037 aa		5.04	□□□□□ -1.6
NIS1	YNL078W	SPT6	P23615	1451 aa	Known RBP	5.03	□□□□□ -1.6
NIS1	YNL078W	GAL10	P04397	699 aa		5.03	□□□□□ -1.6
NIS1	YNL078W	CMP2	P14747	604 aa		5.03	□□□□□ -1.6
NIS1	YNL078W	NPP1	P25353	742 aa		5.03	□□□□□ -1.6
NIS1	YNL078W	ENV11	P53246	860 aa		5.03	□□□□□ -1.6
NIS1	YNL078W	SRP1	Q02821	542 aa	Known RBP	5.03	□□□□□ -1.6
NIS1	YNL078W	SRT1	Q03175	343 aa		5.03	□□□□□ -1.6
NIS1	YNL078W	MSC2	Q03455	724 aa		5.03	□□□□□ -1.6
NIS1	YNL078W	SIZ1	Q04195	904 aa		5.03	□□□□□ -1.6
NIS1	YNL078W	EAF1	Q06337	982 aa		5.03	□□□□□ -1.6
NIS1	YNL078W	SSM4	P40318	1319 aa		5.02	□□□□□ -1.61
NIS1	YNL078W	HIR3	P47171	1648 aa		5.02	□□□□□ -1.61
NIS1	YNL078W	KIN2	P13186	1147 aa	Known RBP	5.02	□□□□□ -1.61
NIS1	YNL078W	GAS1	P22146	559 aa	Known RBP	5.02	□□□□□ -1.61
NIS1	YNL078W	AAR2	P32357	355 aa	Predicted RBP	5.02	□□□□□ -1.61
NIS1	YNL078W	ERT1	P38140	529 aa		5.02	□□□□□ -1.61
NIS1	YNL078W	YAP1801	P38856	637 aa		5.02	□□□□□ -1.61
NIS1	YNL078W	SFB2	P53953	876 aa		5.02	□□□□□ -1.61
NIS1	YNL078W	ROT1	Q03691	256 aa		5.02	□□□□□ -1.61
NIS1	YNL078W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	5.02	□□□□□ -1.61	not detected
NIS1	YNL078W	FLC1	Q08967	793 aa		5.02	□□□□□ -1.61
NIS1	YNL078W	STU1	P38198	1513 aa		5.02	□□□□□ -1.61
NIS1	YNL078W	CIT1	P00890	479 aa		5.01	□□□□□ -1.61
NIS1	YNL078W	ELM1	P32801	640 aa		5.01	□□□□□ -1.61
NIS1	YNL078W	PRS1	P32895	427 aa	Known RBP	5.01	□□□□□ -1.61
NIS1	YNL078W	TSL1	P38427	1098 aa	Known RBP	5.01	□□□□□ -1.61
NIS1	YNL078W	LAM1	P38851	1228 aa		5.01	□□□□□ -1.61
NIS1	YNL078W	RSP5	P39940	809 aa	Known RBP	5.01	□□□□□ -1.61
NIS1	YNL078W	SIT1	P39980	628 aa		5.01	□□□□□ -1.61
NIS1	YNL078W	ERP6	P53198	216 aa		5.01	□□□□□ -1.61
NIS1	YNL078W	YGR125W	P53273	1036 aa		5.01	□□□□□ -1.61
NIS1	YNL078W	SNO2	P53823	222 aa		5.01	□□□□□ -1.61
NIS1	YNL078W	BUL2	Q03758	920 aa	Known RBP	5.01	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms