RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeastyeast

Gene SSN8, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN8YNL025C YDR132CQ03900 495 aa3.76□□□□□ -1.81
SSN8YNL025C YPL260WQ08977 551 aa3.76□□□□□ -1.81
SSN8YNL025C BLI1P35727 113 aa3.75□□□□□ -1.81
SSN8YNL025C MNN1P39106 762 aa3.75□□□□□ -1.81
SSN8YNL025C IOC3P43596 787 aa3.75□□□□□ -1.81
SSN8YNL025C ALD6P54115 500 aaKnown RBP3.75□□□□□ -1.81
SSN8YNL025C COG4Q06096 861 aa3.75□□□□□ -1.81
SSN8YNL025C SGD1Q06132 899 aa3.75□□□□□ -1.81
SSN8YNL025C TOS4Q06266 489 aa3.75□□□□□ -1.81
SSN8YNL025C CDC53Q12018 815 aaKnown RBP3.75□□□□□ -1.81
SSN8YNL025C MCD1Q12158 566 aa3.75□□□□□ -1.81
SSN8YNL025C PTC5Q12511 572 aa3.75□□□□□ -1.81
SSN8YNL025C SNF5P18480 905 aa3.74□□□□□ -1.81
SSN8YNL025C MRC1P25588 1096 aa3.74□□□□□ -1.81
SSN8YNL025C RPN12P32496 274 aa3.74□□□□□ -1.81
SSN8YNL025C DOM34P33309 386 aa3.74□□□□□ -1.81
SSN8YNL025C MPE1P35728 441 aaKnown RBP3.74□□□□□ -1.81
SSN8YNL025C LAM1P38851 1228 aa3.74□□□□□ -1.81
SSN8YNL025C FAA3P39002 694 aa3.74□□□□□ -1.81
SSN8YNL025C PIC2P40035 300 aa3.74□□□□□ -1.81
SSN8YNL025C BUD6P41697 788 aa3.74□□□□□ -1.81
SSN8YNL025C PIN2Q12057 282 aa3.74□□□□□ -1.81
SSN8YNL025C WHI5Q12416 295 aa3.74□□□□□ -1.81
SSN8YNL025C RPA135P22138 1203 aaKnown RBP3.73□□□□□ -1.81
SSN8YNL025C SEC6P32844 805 aa3.73□□□□□ -1.81
SSN8YNL025C ABZ1P37254 787 aaPredicted RBP3.73□□□□□ -1.81
SSN8YNL025C ALG3P38179 458 aa3.73□□□□□ -1.81
SSN8YNL025C UBP12P39538 1254 aa3.73□□□□□ -1.81
SSN8YNL025C MEF2P39677 819 aa3.73□□□□□ -1.81
SSN8YNL025C MPP10P47083 593 aaKnown RBP3.73□□□□□ -1.81
SSN8YNL025C YGR122WP53272 402 aa3.73□□□□□ -1.81
SSN8YNL025C GCN5Q03330 439 aa3.73□□□□□ -1.81
SSN8YNL025C ENT2Q05785 613 aa3.73□□□□□ -1.81
SSN8YNL025C RCL1Q08096 367 aaPredicted RBP3.73□□□□□ -1.81
SSN8YNL025C YOR352WQ08816 343 aa3.73□□□□□ -1.81
SSN8YNL025C TRX2P22803 104 aaKnown RBP3.72□□□□□ -1.81
SSN8YNL025C SSD1P24276 1250 aaKnown RBP RIP-Chip data3.72□□□□□ -1.81not detected
SSN8YNL025C PUF4P25339 888 aaKnown RBP RIP-Chip data3.72□□□□□ -1.81not detected
SSN8YNL025C TAT2P38967 592 aa3.72□□□□□ -1.81
SSN8YNL025C HOS4P40480 1083 aa3.72□□□□□ -1.81
SSN8YNL025C SIW14P53965 281 aa3.72□□□□□ -1.81
SSN8YNL025C DNM1P54861 757 aa3.72□□□□□ -1.81
SSN8YNL025C VPS16Q03308 798 aa3.72□□□□□ -1.81
SSN8YNL025C RSB1Q08417 382 aa3.72□□□□□ -1.81
SSN8YNL025C PRE9P23638 258 aaKnown RBP3.71□□□□□ -1.82
SSN8YNL025C CTS1P29029 562 aa3.71□□□□□ -1.82
SSN8YNL025C RPT1P33299 467 aaKnown RBP3.71□□□□□ -1.82
SSN8YNL025C MNR2P35724 969 aa3.71□□□□□ -1.82
SSN8YNL025C SHM2P37291 469 aaKnown RBP3.71□□□□□ -1.82
SSN8YNL025C PBP2P38151 413 aaKnown RBP RIP-Chip data3.71□□□□□ -1.82not detected
SSN8YNL025C CHZ1P40019 153 aaPredicted RBP3.71□□□□□ -1.82
SSN8YNL025C YEN1P40028 759 aa3.71□□□□□ -1.82
SSN8YNL025C MRPS18P42847 217 aa3.71□□□□□ -1.82
SSN8YNL025C YJR142WP47173 342 aa3.71□□□□□ -1.82
SSN8YNL025C CWC24P53769 259 aa3.71□□□□□ -1.82
SSN8YNL025C SSF2Q12153 453 aaPredicted RBP3.71□□□□□ -1.82
SSN8YNL025C PNS1Q12412 539 aa3.71□□□□□ -1.82
SSN8YNL025C ERP4Q12450 207 aa3.71□□□□□ -1.82
SSN8YNL025C CYC1P00044 109 aaPredicted RBP3.7□□□□□ -1.82
SSN8YNL025C THS1P04801 734 aaKnown RBP3.7□□□□□ -1.82
SSN8YNL025C ENP1P38333 483 aaKnown RBP3.7□□□□□ -1.82
SSN8YNL025C RGD1P38339 666 aa3.7□□□□□ -1.82
SSN8YNL025C PAF1P38351 445 aa3.7□□□□□ -1.82
SSN8YNL025C CRP1P38845 465 aaKnown RBP3.7□□□□□ -1.82
SSN8YNL025C DUS4Q06063 367 aa3.7□□□□□ -1.82
SSN8YNL025C ESF1Q06344 628 aaKnown RBP3.7□□□□□ -1.82
SSN8YNL025C BDF2Q07442 638 aa3.7□□□□□ -1.82
SSN8YNL025C SPO21Q12411 609 aa3.7□□□□□ -1.82
SSN8YNL025C TUB2P02557 457 aaKnown RBP3.69□□□□□ -1.82
SSN8YNL025C MKK2P32491 506 aa3.69□□□□□ -1.82
SSN8YNL025C PEP7P32609 515 aa3.69□□□□□ -1.82
SSN8YNL025C MPT5P39016 859 aaKnown RBP RIP-Chip data3.69□□□□□ -1.82not detected
SSN8YNL025C GPB2P39717 880 aa3.69□□□□□ -1.82
SSN8YNL025C YGR021WP53212 290 aa3.69□□□□□ -1.82
SSN8YNL025C ATG16Q03818 150 aa3.69□□□□□ -1.82
SSN8YNL025C RSM24Q03976 319 aa3.69□□□□□ -1.82
SSN8YNL025C SPO20Q04359 397 aa3.69□□□□□ -1.82
SSN8YNL025C YLR125WQ12138 136 aa3.69□□□□□ -1.82
SSN8YNL025C ATP4P05626 244 aa3.68□□□□□ -1.82
SSN8YNL025C PHO8P11491 566 aa3.68□□□□□ -1.82
SSN8YNL025C SRM1P21827 482 aa3.68□□□□□ -1.82
SSN8YNL025C STE11P23561 717 aa3.68□□□□□ -1.82
SSN8YNL025C TFC3P34111 1160 aa3.68□□□□□ -1.82
SSN8YNL025C JNM1P36224 373 aa3.68□□□□□ -1.82
SSN8YNL025C FUI1P38196 639 aa3.68□□□□□ -1.82
SSN8YNL025C RFC5P38251 354 aa3.68□□□□□ -1.82
SSN8YNL025C HXT13P39924 564 aa3.68□□□□□ -1.82
SSN8YNL025C NUP82P40368 713 aa3.68□□□□□ -1.82
SSN8YNL025C DAS1P47005 663 aa3.68□□□□□ -1.82
SSN8YNL025C GNP1P48813 663 aa3.68□□□□□ -1.82
SSN8YNL025C SPT20P50875 604 aa3.68□□□□□ -1.82
SSN8YNL025C PBP1P53297 722 aaKnown RBP3.68□□□□□ -1.82
SSN8YNL025C HXT17P53631 564 aa3.68□□□□□ -1.82
SSN8YNL025C FOL1P53848 824 aa3.68□□□□□ -1.82
SSN8YNL025C HXT15P54854 567 aa3.68□□□□□ -1.82
SSN8YNL025C SIZ1Q04195 904 aa3.68□□□□□ -1.82
SSN8YNL025C ATG13Q06628 738 aa3.68□□□□□ -1.82
SSN8YNL025C SLX4Q12098 748 aa3.68□□□□□ -1.82
SSN8YNL025C DED1P06634 604 aaKnown RBP3.67□□□□□ -1.82
SSN8YNL025C RAD4P14736 754 aa3.67□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 65.8 ms