RNA–Protein interactions for RNA: YLR353W

BUD8, Transcript of Protein involved in bud-site selection, yeastyeast

Gene BUD8, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD8YLR353W YKL077WP36081 392 aa5.92□□□□□ -1.46
BUD8YLR353W TIM50Q02776 476 aa5.92□□□□□ -1.46
BUD8YLR353W SEN1Q00416 2231 aaKnown RBP5.91□□□□□ -1.46
BUD8YLR353W PHO8P11491 566 aa5.91□□□□□ -1.46
BUD8YLR353W TRK1P12685 1235 aa5.91□□□□□ -1.46
BUD8YLR353W SEA4P38164 1038 aa5.91□□□□□ -1.46
BUD8YLR353W RSP5P39940 809 aaKnown RBP5.91□□□□□ -1.46
BUD8YLR353W IRR1P40541 1150 aa5.91□□□□□ -1.46
BUD8YLR353W LSB6P42951 607 aa5.91□□□□□ -1.46
BUD8YLR353W SCW11P53189 542 aa5.91□□□□□ -1.46
BUD8YLR353W YNR065CP53751 1116 aa5.91□□□□□ -1.46
BUD8YLR353W ROD1Q02805 837 aa5.91□□□□□ -1.46
BUD8YLR353W YLR125WQ12138 136 aa5.91□□□□□ -1.46
BUD8YLR353W TY1A-BLQ12266 440 aa5.91□□□□□ -1.46
BUD8YLR353W OSH2Q12451 1283 aa5.91□□□□□ -1.46
BUD8YLR353W RPL8BP29453 256 aaKnown RBP5.9□□□□□ -1.46
BUD8YLR353W ABD1P32783 436 aaPredicted RBP5.9□□□□□ -1.46
BUD8YLR353W MNN1P39106 762 aa5.9□□□□□ -1.46
BUD8YLR353W PRK1P40494 810 aa5.9□□□□□ -1.46
BUD8YLR353W FMP25Q08023 583 aa5.9□□□□□ -1.46
BUD8YLR353W TY1A-LR4P0C2I8 440 aaKnown RBP5.9□□□□□ -1.47
BUD8YLR353W TY1A-DR6P0CX70 440 aa5.9□□□□□ -1.47
BUD8YLR353W TY1A-ER1P0CX71 440 aa5.9□□□□□ -1.47
BUD8YLR353W TY1A-LR2P0CX72 440 aa5.9□□□□□ -1.47
BUD8YLR353W TY1A-PLP0CX73 440 aa5.9□□□□□ -1.47
BUD8YLR353W TY1A-JR1P0CX74 440 aa5.9□□□□□ -1.47
BUD8YLR353W TY1A-LR3P0CX75 440 aa5.9□□□□□ -1.47
BUD8YLR353W TY1A-ML2P0CX76 440 aa5.9□□□□□ -1.47
BUD8YLR353W VBA5P36172 582 aa5.9□□□□□ -1.47
BUD8YLR353W PFF1P38244 976 aa5.9□□□□□ -1.47
BUD8YLR353W GGA2P38817 585 aaKnown RBP5.9□□□□□ -1.47
BUD8YLR353W YGR125WP53273 1036 aa5.9□□□□□ -1.47
BUD8YLR353W ESC2Q06340 456 aa5.9□□□□□ -1.47
BUD8YLR353W TY1A-GR1Q12085 440 aa5.9□□□□□ -1.47
BUD8YLR353W TY1A-PR3Q6Q5H1 440 aaKnown RBP5.9□□□□□ -1.47
BUD8YLR353W TY1A-OLQ92392 440 aaKnown RBP5.9□□□□□ -1.47
BUD8YLR353W MRP10O75012 95 aa5.89□□□□□ -1.47
BUD8YLR353W SCP160P06105 1222 aaKnown RBP RIP-Chip data5.89□□□□□ -1.47not detected
BUD8YLR353W GAL11P19659 1081 aa5.89□□□□□ -1.47
BUD8YLR353W MKK2P32491 506 aa5.89□□□□□ -1.47
BUD8YLR353W BRE2P43132 505 aa5.89□□□□□ -1.47
BUD8YLR353W YMR265CQ03508 461 aaKnown RBP5.89□□□□□ -1.47
BUD8YLR353W UTP14Q04500 899 aaKnown RBP5.89□□□□□ -1.47
BUD8YLR353W YLR225CQ05948 407 aaKnown RBP5.89□□□□□ -1.47
BUD8YLR353W SGD1Q06132 899 aa5.89□□□□□ -1.47
BUD8YLR353W YLL067CQ07888 1374 aa5.89□□□□□ -1.47
BUD8YLR353W HSP60P19882 572 aaKnown RBP5.88□□□□□ -1.47
BUD8YLR353W FPS1P23900 669 aa5.88□□□□□ -1.47
BUD8YLR353W PBY1P38254 753 aa5.88□□□□□ -1.47
BUD8YLR353W PFD1P46988 109 aa5.88□□□□□ -1.47
BUD8YLR353W GUP1P53154 560 aa5.88□□□□□ -1.47
BUD8YLR353W EST2Q06163 884 aa5.88□□□□□ -1.47
BUD8YLR353W FMP27Q06179 2628 aa5.88□□□□□ -1.47
BUD8YLR353W YLR419WQ06698 1435 aaKnown RBP5.88□□□□□ -1.47
BUD8YLR353W CIT1P00890 479 aa5.88□□□□□ -1.47
BUD8YLR353W YKU70P32807 602 aa5.88□□□□□ -1.47
BUD8YLR353W NEM1P38757 446 aa5.88□□□□□ -1.47
BUD8YLR353W ERP6P53198 216 aa5.88□□□□□ -1.47
BUD8YLR353W CUZ1P53899 274 aa5.88□□□□□ -1.47
BUD8YLR353W GCR2Q01722 534 aa5.88□□□□□ -1.47
BUD8YLR353W TY1A-DR2Q03964 440 aaKnown RBP5.88□□□□□ -1.47
BUD8YLR353W YIG1Q08956 461 aa5.88□□□□□ -1.47
BUD8YLR353W YDR461C-AQ2V2P7 80 aa5.88□□□□□ -1.47
BUD8YLR353W SBP1P10080 294 aaKnown RBP5.87□□□□□ -1.47
BUD8YLR353W INO1P11986 533 aa5.87□□□□□ -1.47
BUD8YLR353W MSM1P22438 575 aa5.87□□□□□ -1.47
BUD8YLR353W MTR4P47047 1073 aaKnown RBP5.87□□□□□ -1.47
BUD8YLR353W HAS1Q03532 505 aaKnown RBP5.87□□□□□ -1.47
BUD8YLR353W TIF35Q04067 274 aaKnown RBP5.87□□□□□ -1.47
BUD8YLR353W UTP5Q04177 643 aaKnown RBP5.87□□□□□ -1.47
BUD8YLR353W YGR161W-CQ3E744 92 aa5.87□□□□□ -1.47
BUD8YLR353W CAN1P04817 590 aa5.86□□□□□ -1.47
BUD8YLR353W SYP1P25623 870 aaKnown RBP5.86□□□□□ -1.47
BUD8YLR353W AFG2P32794 780 aa5.86□□□□□ -1.47
BUD8YLR353W ADD66P36040 267 aa5.86□□□□□ -1.47
BUD8YLR353W ARL1P38116 183 aaKnown RBP5.86□□□□□ -1.47
BUD8YLR353W LEM3P42838 414 aa5.86□□□□□ -1.47
BUD8YLR353W ROG3P43602 733 aa5.86□□□□□ -1.47
BUD8YLR353W YGL081WP53156 320 aa5.86□□□□□ -1.47
BUD8YLR353W UTP8P53276 713 aaKnown RBP5.86□□□□□ -1.47
BUD8YLR353W TY1A-MR1Q04215 440 aa5.86□□□□□ -1.47
BUD8YLR353W EAF1Q06337 982 aa5.86□□□□□ -1.47
BUD8YLR353W RKM4Q12504 494 aa5.86□□□□□ -1.47
BUD8YLR353W SSM4P40318 1319 aa5.86□□□□□ -1.47
BUD8YLR353W DED1P06634 604 aaKnown RBP5.85□□□□□ -1.47
BUD8YLR353W ERR1P0CX10 437 aa5.85□□□□□ -1.47
BUD8YLR353W ERR2P0CX11 437 aa5.85□□□□□ -1.47
BUD8YLR353W TSR4P25040 408 aa5.85□□□□□ -1.47
BUD8YLR353W THI4P32318 326 aa5.85□□□□□ -1.47
BUD8YLR353W NEO1P40527 1151 aa5.85□□□□□ -1.47
BUD8YLR353W YJR142WP47173 342 aa5.85□□□□□ -1.47
BUD8YLR353W RKM2Q03942 479 aa5.85□□□□□ -1.47
BUD8YLR353W ADE6P38972 1358 aaKnown RBP5.85□□□□□ -1.47
BUD8YLR353W DBP5P20449 482 aaKnown RBP5.85□□□□□ -1.47
BUD8YLR353W PIN4P34217 668 aaKnown RBP RIP-Chip data5.85□□□□□ -1.47not detected
BUD8YLR353W SNF7P39929 240 aaKnown RBP5.85□□□□□ -1.47
BUD8YLR353W SLS1P42900 643 aa5.85□□□□□ -1.47
BUD8YLR353W CNN1P43618 361 aa5.85□□□□□ -1.47
BUD8YLR353W RAT1Q02792 1006 aaKnown RBP5.85□□□□□ -1.47
BUD8YLR353W ARE1P25628 610 aa5.84□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms