RNA–Protein interactions for RNA: YLR277C

YSH1, Transcript of Putative endoribonuclease, yeast

Gene YSH1, Length 2,340 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YSH1	YLR277C	PAT1	P25644	796 aa	Known RBP	4.44	□□□□□ -1.7
YSH1	YLR277C	TEF4	P36008	412 aa	Known RBP	4.44	□□□□□ -1.7
YSH1	YLR277C	UIP5	P36137	443 aa		4.44	□□□□□ -1.7
YSH1	YLR277C	CCL1	P37366	393 aa		4.44	□□□□□ -1.7
YSH1	YLR277C	CCT3	P39077	534 aa	Known RBP	4.44	□□□□□ -1.7
YSH1	YLR277C	YER156C	P40093	338 aa	Known RBP	4.44	□□□□□ -1.7
YSH1	YLR277C	VTC2	P43585	828 aa		4.44	□□□□□ -1.7
YSH1	YLR277C	YJL007C	P47080	104 aa		4.44	□□□□□ -1.7
YSH1	YLR277C	ATG1	P53104	897 aa		4.44	□□□□□ -1.7
YSH1	YLR277C	MON1	P53129	644 aa		4.44	□□□□□ -1.7
YSH1	YLR277C	ORM1	P53224	222 aa		4.44	□□□□□ -1.7
YSH1	YLR277C	YGR067C	P53243	804 aa		4.44	□□□□□ -1.7
YSH1	YLR277C	YNL144C	P53907	740 aa		4.44	□□□□□ -1.7
YSH1	YLR277C	UBP2	Q01476	1272 aa		4.44	□□□□□ -1.7
YSH1	YLR277C	GCR2	Q01722	534 aa		4.44	□□□□□ -1.7
YSH1	YLR277C	STE20	Q03497	939 aa	Known RBP	4.44	□□□□□ -1.7
YSH1	YLR277C	PLP1	Q04004	230 aa		4.44	□□□□□ -1.7
YSH1	YLR277C	ADE13	Q05911	482 aa	Known RBP	4.44	□□□□□ -1.7
YSH1	YLR277C	YLR352W	Q06479	807 aa		4.44	□□□□□ -1.7
YSH1	YLR277C	PGC1	Q08959	321 aa		4.44	□□□□□ -1.7
YSH1	YLR277C	NOT5	Q12514	560 aa	Predicted RBP	4.44	□□□□□ -1.7
YSH1	YLR277C	PCT1	P13259	424 aa		4.44	□□□□□ -1.7
YSH1	YLR277C	PMA2	P19657	947 aa		4.44	□□□□□ -1.7
YSH1	YLR277C	ASF2	P32448	525 aa	Predicted RBP	4.44	□□□□□ -1.7
YSH1	YLR277C	UBC6	P33296	250 aa	Predicted RBP	4.44	□□□□□ -1.7
YSH1	YLR277C	DOM34	P33309	386 aa		4.44	□□□□□ -1.7
YSH1	YLR277C	TFC4	P33339	1025 aa		4.44	□□□□□ -1.7
YSH1	YLR277C	CTM1	P38818	585 aa		4.44	□□□□□ -1.7
YSH1	YLR277C	YAP1801	P38856	637 aa		4.44	□□□□□ -1.7
YSH1	YLR277C	HAL5	P38970	855 aa	Known RBP	4.44	□□□□□ -1.7
YSH1	YLR277C	IES5	P40060	125 aa		4.44	□□□□□ -1.7
YSH1	YLR277C	YIR014W	P40570	242 aa		4.44	□□□□□ -1.7
YSH1	YLR277C	PHB1	P40961	287 aa		4.44	□□□□□ -1.7
YSH1	YLR277C	RRN7	P40992	514 aa		4.44	□□□□□ -1.7
YSH1	YLR277C	MET12	P46151	657 aa		4.44	□□□□□ -1.7
YSH1	YLR277C	FYV8	P46949	817 aa	Known RBP	4.44	□□□□□ -1.7
YSH1	YLR277C	UBP15	P50101	1230 aa		4.44	□□□□□ -1.7
YSH1	YLR277C	UBA2	P52488	636 aa		4.44	□□□□□ -1.7
YSH1	YLR277C	ULP1	Q02724	621 aa		4.44	□□□□□ -1.7
YSH1	YLR277C	INP2	Q03824	705 aa		4.44	□□□□□ -1.7
YSH1	YLR277C	VAM6	Q07468	1049 aa		4.44	□□□□□ -1.7
YSH1	YLR277C	CHS5	Q12114	671 aa	Known RBP	4.44	□□□□□ -1.7
YSH1	YLR277C	LSO2	Q3E772	92 aa	Known RBP	4.44	□□□□□ -1.7
YSH1	YLR277C	TIF1	P10081	395 aa	Known RBP	4.43	□□□□□ -1.7
YSH1	YLR277C	ESS1	P22696	170 aa		4.43	□□□□□ -1.7
YSH1	YLR277C	YDJ1	P25491	409 aa	Known RBP	4.43	□□□□□ -1.7
YSH1	YLR277C	CPS1	P27614	576 aa		4.43	□□□□□ -1.7
YSH1	YLR277C	HSP104	P31539	908 aa	Known RBP	4.43	□□□□□ -1.7
YSH1	YLR277C	VPH2	P32341	215 aa		4.43	□□□□□ -1.7
YSH1	YLR277C	SLA1	P32790	1244 aa		4.43	□□□□□ -1.7
YSH1	YLR277C	ECM4	P36156	370 aa		4.43	□□□□□ -1.7
YSH1	YLR277C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.43	□□□□□ -1.7	not detected
YSH1	YLR277C	SAP155	P43612	1002 aa		4.43	□□□□□ -1.7
YSH1	YLR277C	JJJ2	P46997	583 aa		4.43	□□□□□ -1.7
YSH1	YLR277C	SNX4	P47057	423 aa		4.43	□□□□□ -1.7
YSH1	YLR277C	YGR021W	P53212	290 aa		4.43	□□□□□ -1.7
YSH1	YLR277C	BET4	Q00618	327 aa		4.43	□□□□□ -1.7
YSH1	YLR277C	ESC2	Q06340	456 aa		4.43	□□□□□ -1.7
YSH1	YLR277C	SSC1	P0CS90	654 aa	Known RBP	4.43	□□□□□ -1.7
YSH1	YLR277C	PGI1	P12709	554 aa	Known RBP	4.43	□□□□□ -1.7
YSH1	YLR277C	RGP1	P16664	663 aa		4.43	□□□□□ -1.7
YSH1	YLR277C	DUR3	P33413	735 aa		4.43	□□□□□ -1.7
YSH1	YLR277C	STE13	P33894	931 aa		4.43	□□□□□ -1.7
YSH1	YLR277C	MRP8	P35719	219 aa		4.43	□□□□□ -1.7
YSH1	YLR277C	YSW1	P38280	609 aa		4.43	□□□□□ -1.7
YSH1	YLR277C	SAK1	P38990	1142 aa		4.43	□□□□□ -1.7
YSH1	YLR277C	RET2	P43621	546 aa		4.43	□□□□□ -1.7
YSH1	YLR277C	RSC3	Q06639	885 aa		4.43	□□□□□ -1.7
YSH1	YLR277C	YDL124W	Q07551	312 aa	Known RBP	4.43	□□□□□ -1.7
YSH1	YLR277C	ENT1	Q12518	454 aa		4.43	□□□□□ -1.7
YSH1	YLR277C	RTP1	Q12751	981 aa		4.43	□□□□□ -1.7
YSH1	YLR277C	SPS1	P08458	490 aa		4.42	□□□□□ -1.7
YSH1	YLR277C	DPB3	P27344	201 aa		4.42	□□□□□ -1.7
YSH1	YLR277C	XRS2	P33301	854 aa		4.42	□□□□□ -1.7
YSH1	YLR277C	RSM22	P36056	628 aa		4.42	□□□□□ -1.7
YSH1	YLR277C	RRN3	P36070	627 aa		4.42	□□□□□ -1.7
YSH1	YLR277C	BAP2	P38084	609 aa		4.42	□□□□□ -1.7
YSH1	YLR277C	YHR020W	P38708	688 aa	Known RBP	4.42	□□□□□ -1.7
YSH1	YLR277C	KAP123	P40069	1113 aa	Known RBP	4.42	□□□□□ -1.7
YSH1	YLR277C	AGX1	P43567	385 aa		4.42	□□□□□ -1.7
YSH1	YLR277C	NUP85	P46673	744 aa		4.42	□□□□□ -1.7
YSH1	YLR277C	APS3	P47064	194 aa		4.42	□□□□□ -1.7
YSH1	YLR277C	TRF5	P48561	642 aa	Known RBP	4.42	□□□□□ -1.7
YSH1	YLR277C	FOL2	P51601	243 aa	Known RBP	4.42	□□□□□ -1.7
YSH1	YLR277C	PEX14	P53112	341 aa		4.42	□□□□□ -1.7
YSH1	YLR277C	HST1	P53685	503 aa		4.42	□□□□□ -1.7
YSH1	YLR277C	YML108W	Q03759	105 aa		4.42	□□□□□ -1.7
YSH1	YLR277C	ATG16	Q03818	150 aa		4.42	□□□□□ -1.7
YSH1	YLR277C	ESF1	Q06344	628 aa	Known RBP	4.42	□□□□□ -1.7
YSH1	YLR277C	TSR1	Q07381	788 aa	Known RBP	4.42	□□□□□ -1.7
YSH1	YLR277C	YOR378W	Q08902	515 aa		4.42	□□□□□ -1.7
YSH1	YLR277C	RRP6	Q12149	733 aa	Known RBP	4.42	□□□□□ -1.7
YSH1	YLR277C	BUG1	Q12191	341 aa		4.42	□□□□□ -1.7
YSH1	YLR277C	JIP3	O13555	125 aa		4.41	□□□□□ -1.7
YSH1	YLR277C	RAD27	P26793	382 aa		4.41	□□□□□ -1.7
YSH1	YLR277C	MTC2	P34246	357 aa		4.41	□□□□□ -1.7
YSH1	YLR277C	PSY4	P38193	441 aa		4.41	□□□□□ -1.7
YSH1	YLR277C	MSR1	P38714	643 aa		4.41	□□□□□ -1.7
YSH1	YLR277C	MTW1	P39731	289 aa		4.41	□□□□□ -1.7
YSH1	YLR277C	ALA1	P40825	983 aa	Known RBP	4.41	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms