RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C STE14P32584 239 aa2.5□□□□□ -2.01
CSF1YLR087C BCK2P33306 851 aa2.5□□□□□ -2.01
CSF1YLR087C TYS1P36421 394 aaKnown RBP2.5□□□□□ -2.01
CSF1YLR087C OTU2P38747 307 aaKnown RBP2.5□□□□□ -2.01
CSF1YLR087C SHU2P38957 223 aa2.5□□□□□ -2.01
CSF1YLR087C SGM1P47166 707 aa2.5□□□□□ -2.01
CSF1YLR087C YOR352WQ08816 343 aa2.5□□□□□ -2.01
CSF1YLR087C TRM8Q12009 286 aa2.5□□□□□ -2.01
CSF1YLR087C KEX1P09620 729 aa2.5□□□□□ -2.01
CSF1YLR087C KGD2P19262 463 aaPredicted RBP2.5□□□□□ -2.01
CSF1YLR087C REB1P21538 810 aa2.5□□□□□ -2.01
CSF1YLR087C CPR3P25719 182 aa2.5□□□□□ -2.01
CSF1YLR087C PAP1P29468 568 aaKnown RBP2.5□□□□□ -2.01
CSF1YLR087C NIC96P34077 839 aa2.5□□□□□ -2.01
CSF1YLR087C CMC1P36064 111 aa2.5□□□□□ -2.01
CSF1YLR087C YLR287CQ05881 355 aa2.5□□□□□ -2.01
CSF1YLR087C DNL4Q08387 944 aaPredicted RBP2.5□□□□□ -2.01
CSF1YLR087C ADE5,7P07244 802 aaKnown RBP2.5□□□□□ -2.01
CSF1YLR087C GPA1P08539 472 aa2.5□□□□□ -2.01
CSF1YLR087C KCC4P25389 1037 aa2.5□□□□□ -2.01
CSF1YLR087C DOT6P40059 670 aaKnown RBP2.5□□□□□ -2.01
CSF1YLR087C PHB1P40961 287 aa2.5□□□□□ -2.01
CSF1YLR087C MSH6Q03834 1242 aa2.5□□□□□ -2.01
CSF1YLR087C YPL191CQ08930 360 aa2.5□□□□□ -2.01
CSF1YLR087C FUR1P18562 216 aaKnown RBP2.5□□□□□ -2.01
CSF1YLR087C LYP1P32487 611 aa2.5□□□□□ -2.01
CSF1YLR087C PAM1P37304 830 aaKnown RBP2.5□□□□□ -2.01
CSF1YLR087C VHR2P40041 505 aa2.5□□□□□ -2.01
CSF1YLR087C MEH1Q02205 184 aa2.5□□□□□ -2.01
CSF1YLR087C SDH5Q08230 162 aa2.5□□□□□ -2.01
CSF1YLR087C CHS2P14180 963 aa2.5□□□□□ -2.01
CSF1YLR087C MER1P16523 270 aa2.5□□□□□ -2.01
CSF1YLR087C TUP1P16649 713 aa2.5□□□□□ -2.01
CSF1YLR087C LOS1P33418 1100 aaPredicted RBP2.5□□□□□ -2.01
CSF1YLR087C ALD5P40047 520 aaKnown RBP2.5□□□□□ -2.01
CSF1YLR087C AXL1P40851 1208 aa2.5□□□□□ -2.01
CSF1YLR087C REF2P42073 533 aaPredicted RBP2.5□□□□□ -2.01
CSF1YLR087C SNX4P47057 423 aa2.5□□□□□ -2.01
CSF1YLR087C VHS3Q08438 674 aa2.5□□□□□ -2.01
CSF1YLR087C YOL087CQ99247 1116 aa2.5□□□□□ -2.01
CSF1YLR087C BEM4P39011 633 aa2.49□□□□□ -2.01
CSF1YLR087C YGR111WP53265 400 aa2.49□□□□□ -2.01
CSF1YLR087C YOR289WQ12012 251 aaPredicted RBP2.49□□□□□ -2.01
CSF1YLR087C PRP4P20053 465 aaKnown RBP2.49□□□□□ -2.01
CSF1YLR087C MSH2P25847 964 aa2.49□□□□□ -2.01
CSF1YLR087C MSN5P52918 1224 aa2.49□□□□□ -2.01
CSF1YLR087C DNF3Q12674 1656 aa2.49□□□□□ -2.01
CSF1YLR087C UBA1P22515 1024 aaKnown RBP2.49□□□□□ -2.01
CSF1YLR087C BRF1P29056 596 aa2.49□□□□□ -2.01
CSF1YLR087C ARC19P33204 171 aaKnown RBP2.49□□□□□ -2.01
CSF1YLR087C TIF3P34167 436 aaKnown RBP2.49□□□□□ -2.01
CSF1YLR087C YKR078WP36158 585 aaKnown RBP2.49□□□□□ -2.01
CSF1YLR087C MGE1P38523 228 aa2.49□□□□□ -2.01
CSF1YLR087C PAC10P48363 199 aa2.49□□□□□ -2.01
CSF1YLR087C MAL11P53048 616 aa2.49□□□□□ -2.01
CSF1YLR087C SOL4P53315 255 aa2.49□□□□□ -2.01
CSF1YLR087C RET3P53600 189 aa2.49□□□□□ -2.01
CSF1YLR087C TAF12Q03761 539 aa2.49□□□□□ -2.01
CSF1YLR087C RRP6Q12149 733 aaKnown RBP2.49□□□□□ -2.01
CSF1YLR087C DPH5P32469 300 aaPredicted RBP2.49□□□□□ -2.01
CSF1YLR087C YBR138CP38277 524 aa2.49□□□□□ -2.01
CSF1YLR087C URB2P47108 1174 aa2.49□□□□□ -2.01
CSF1YLR087C BPL1P48445 690 aaPredicted RBP2.49□□□□□ -2.01
CSF1YLR087C NCS6P53088 359 aa2.49□□□□□ -2.01
CSF1YLR087C MRN1Q08925 612 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
CSF1YLR087C ARG82P07250 355 aa2.49□□□□□ -2.01
CSF1YLR087C SEC15P22224 910 aa2.49□□□□□ -2.01
CSF1YLR087C VPS3P23643 1011 aa2.49□□□□□ -2.01
CSF1YLR087C RPL24BP24000 155 aaKnown RBP2.49□□□□□ -2.01
CSF1YLR087C PNG1Q02890 363 aa2.49□□□□□ -2.01
CSF1YLR087C RGC1Q06108 1083 aaKnown RBP2.49□□□□□ -2.01
CSF1YLR087C HIM1Q06674 414 aa2.49□□□□□ -2.01
CSF1YLR087C REH1Q06709 432 aa2.49□□□□□ -2.01
CSF1YLR087C OPY2Q06810 360 aa2.49□□□□□ -2.01
CSF1YLR087C VAM6Q07468 1049 aa2.49□□□□□ -2.01
CSF1YLR087C SCM3Q12334 223 aa2.49□□□□□ -2.01
CSF1YLR087C PFK2P16862 959 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
CSF1YLR087C OPI1P21957 404 aa2.49□□□□□ -2.01
CSF1YLR087C YUR1P26725 428 aa2.49□□□□□ -2.01
CSF1YLR087C NIP1P32497 812 aaKnown RBP2.49□□□□□ -2.01
CSF1YLR087C RPC34P32910 317 aa2.49□□□□□ -2.01
CSF1YLR087C SQT1P35184 431 aa2.49□□□□□ -2.01
CSF1YLR087C SSO2P39926 295 aa2.49□□□□□ -2.01
CSF1YLR087C SIP5P40210 489 aaKnown RBP2.49□□□□□ -2.01
CSF1YLR087C ATG36P46983 293 aa2.49□□□□□ -2.01
CSF1YLR087C APS3P47064 194 aa2.49□□□□□ -2.01
CSF1YLR087C SRV2P17555 526 aaKnown RBP2.49□□□□□ -2.01
CSF1YLR087C UGA3P26370 528 aa2.49□□□□□ -2.01
CSF1YLR087C EFT1P32324 842 aaKnown RBP2.49□□□□□ -2.01
CSF1YLR087C GEF1P37020 779 aa2.49□□□□□ -2.01
CSF1YLR087C BFR1P38934 470 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
CSF1YLR087C EMP65P40085 556 aa2.49□□□□□ -2.01
CSF1YLR087C YJR054WP47114 497 aa2.49□□□□□ -2.01
CSF1YLR087C YGR067CP53243 804 aa2.49□□□□□ -2.01
CSF1YLR087C COG6P53959 839 aa2.49□□□□□ -2.01
CSF1YLR087C UBP2Q01476 1272 aa2.49□□□□□ -2.01
CSF1YLR087C SWP1Q02795 286 aa2.49□□□□□ -2.01
CSF1YLR087C SNZ1Q03148 297 aa2.49□□□□□ -2.01
CSF1YLR087C STB3Q12427 513 aa2.49□□□□□ -2.01
CSF1YLR087C ZIP1P31111 875 aa2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 62.5 ms