RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W DOT1Q04089 582 aaKnown RBP5.16□□□□□ -1.58
CTK1YKL139W THI73Q07904 523 aa5.16□□□□□ -1.58
CTK1YKL139W NUP145P49687 1317 aa5.16□□□□□ -1.58
CTK1YKL139W ADE8P04161 214 aa5.16□□□□□ -1.58
CTK1YKL139W PHR1P05066 565 aaKnown RBP RIP-Chip data5.16□□□□□ -1.58not detected
CTK1YKL139W GSY1P23337 708 aa5.16□□□□□ -1.58
CTK1YKL139W SSD1P24276 1250 aaKnown RBP RIP-Chip data5.16□□□□□ -1.58not detected
CTK1YKL139W ERT1P38140 529 aa5.16□□□□□ -1.58
CTK1YKL139W NMD3P38861 518 aaKnown RBP5.16□□□□□ -1.58
CTK1YKL139W SEC26P41810 973 aaKnown RBP5.16□□□□□ -1.58
CTK1YKL139W YLR257WQ06146 321 aaKnown RBP5.16□□□□□ -1.58
CTK1YKL139W YLR001CQ07895 862 aa5.16□□□□□ -1.58
CTK1YKL139W YOR223WQ12015 292 aa5.16□□□□□ -1.58
CTK1YKL139W TPM2P40414 161 aa5.15□□□□□ -1.59
CTK1YKL139W SDA1P53313 767 aaKnown RBP5.15□□□□□ -1.59
CTK1YKL139W ALO1P54783 526 aaKnown RBP5.15□□□□□ -1.59
CTK1YKL139W UME1Q03010 460 aa5.15□□□□□ -1.59
CTK1YKL139W LCD1Q04377 747 aa5.15□□□□□ -1.59
CTK1YKL139W TMA17Q12513 150 aa5.15□□□□□ -1.59
CTK1YKL139W TRK2P28584 889 aa5.14□□□□□ -1.59
CTK1YKL139W CDC12P32468 407 aaKnown RBP5.14□□□□□ -1.59
CTK1YKL139W SAH1P39954 449 aaKnown RBP5.14□□□□□ -1.59
CTK1YKL139W DSE4P53753 1117 aa5.14□□□□□ -1.59
CTK1YKL139W SRP1Q02821 542 aaKnown RBP5.14□□□□□ -1.59
CTK1YKL139W BUL2Q03758 920 aaKnown RBP5.14□□□□□ -1.59
CTK1YKL139W NHA1Q99271 985 aa5.14□□□□□ -1.59
CTK1YKL139W CDC9P04819 755 aa5.13□□□□□ -1.59
CTK1YKL139W AFR1P33304 620 aa5.13□□□□□ -1.59
CTK1YKL139W NNK1P36003 928 aa5.13□□□□□ -1.59
CTK1YKL139W TOK1P40310 691 aa5.13□□□□□ -1.59
CTK1YKL139W YJL045WP47052 634 aa5.13□□□□□ -1.59
CTK1YKL139W YJR120WP47157 116 aa5.13□□□□□ -1.59
CTK1YKL139W GPG1P53130 126 aa5.13□□□□□ -1.59
CTK1YKL139W SMY2P32909 740 aaKnown RBP5.12□□□□□ -1.59
CTK1YKL139W YKL151CP36059 337 aa5.12□□□□□ -1.59
CTK1YKL139W ENP1P38333 483 aaKnown RBP5.12□□□□□ -1.59
CTK1YKL139W NOP2P40991 618 aaKnown RBP5.12□□□□□ -1.59
CTK1YKL139W YFL054CP43549 646 aa5.12□□□□□ -1.59
CTK1YKL139W HRQ1Q05549 1077 aa5.12□□□□□ -1.59
CTK1YKL139W HRK1Q08732 759 aaKnown RBP5.12□□□□□ -1.59
CTK1YKL139W ACM1Q08981 209 aa5.12□□□□□ -1.59
CTK1YKL139W FAP7Q12055 197 aaPredicted RBP5.12□□□□□ -1.59
CTK1YKL139W SRD1P09007 221 aa5.12□□□□□ -1.59
CTK1YKL139W RAD18P10862 487 aa5.12□□□□□ -1.59
CTK1YKL139W NPP1P25353 742 aa5.12□□□□□ -1.59
CTK1YKL139W PRO1P32264 428 aa5.12□□□□□ -1.59
CTK1YKL139W SLA2P33338 968 aa5.12□□□□□ -1.59
CTK1YKL139W SPC29P33419 253 aa5.12□□□□□ -1.59
CTK1YKL139W GPT2P36148 743 aa5.12□□□□□ -1.59
CTK1YKL139W RPN3P40016 523 aaKnown RBP5.12□□□□□ -1.59
CTK1YKL139W REC104P33323 182 aa5.11□□□□□ -1.59
CTK1YKL139W TYS1P36421 394 aaKnown RBP5.11□□□□□ -1.59
CTK1YKL139W BAP2P38084 609 aa5.11□□□□□ -1.59
CTK1YKL139W RRM3P38766 723 aa5.11□□□□□ -1.59
CTK1YKL139W MGS1P40151 587 aa5.11□□□□□ -1.59
CTK1YKL139W GYP8P43570 497 aa5.11□□□□□ -1.59
CTK1YKL139W PEX8P53248 589 aa5.11□□□□□ -1.59
CTK1YKL139W NCE103P53615 221 aa5.11□□□□□ -1.59
CTK1YKL139W UGA2P38067 497 aa5.1□□□□□ -1.59
CTK1YKL139W JJJ3P47138 172 aa5.1□□□□□ -1.59
CTK1YKL139W HOS3Q02959 697 aaKnown RBP5.1□□□□□ -1.59
CTK1YKL139W TPP1Q03796 238 aa5.1□□□□□ -1.59
CTK1YKL139W SEC6P32844 805 aa5.09□□□□□ -1.59
CTK1YKL139W NIT1P40447 199 aa5.09□□□□□ -1.59
CTK1YKL139W CCM1P48237 864 aaPredicted RBP5.09□□□□□ -1.59
CTK1YKL139W MET13P53128 600 aa5.09□□□□□ -1.59
CTK1YKL139W YGR035CP53222 116 aa5.09□□□□□ -1.59
CTK1YKL139W YGR283CP53336 341 aaPredicted RBP5.09□□□□□ -1.59
CTK1YKL139W TY1A-NL1Q12391 440 aaKnown RBP5.09□□□□□ -1.59
CTK1YKL139W PCL2P25693 308 aa5.08□□□□□ -1.6
CTK1YKL139W YSC84P32793 468 aa5.08□□□□□ -1.6
CTK1YKL139W MTC2P34246 357 aa5.08□□□□□ -1.6
CTK1YKL139W GPP1P41277 250 aaKnown RBP5.08□□□□□ -1.6
CTK1YKL139W PUS7Q08647 676 aaKnown RBP5.08□□□□□ -1.6
CTK1YKL139W SFL1P20134 766 aa5.08□□□□□ -1.6
CTK1YKL139W MDJ1P35191 511 aa5.08□□□□□ -1.6
CTK1YKL139W YBR238CP38330 731 aaKnown RBP5.08□□□□□ -1.6
CTK1YKL139W TSL1P38427 1098 aaKnown RBP5.08□□□□□ -1.6
CTK1YKL139W PMC1P38929 1173 aaPredicted RBP5.08□□□□□ -1.6
CTK1YKL139W TY4A-JP47023 414 aa5.08□□□□□ -1.6
CTK1YKL139W TNA1P53322 534 aa5.08□□□□□ -1.6
CTK1YKL139W MTQ2Q03920 221 aaPredicted RBP5.08□□□□□ -1.6
CTK1YKL139W HFD1Q04458 532 aa5.08□□□□□ -1.6
CTK1YKL139W RSC3Q06639 885 aa5.08□□□□□ -1.6
CTK1YKL139W ENV7Q12003 364 aa5.08□□□□□ -1.6
CTK1YKL139W BI4P03879 638 aa5.07□□□□□ -1.6
CTK1YKL139W SNF5P18480 905 aa5.07□□□□□ -1.6
CTK1YKL139W EUG1P32474 517 aa5.07□□□□□ -1.6
CTK1YKL139W STO1P34160 861 aaKnown RBP5.07□□□□□ -1.6
CTK1YKL139W YEL1P34225 687 aa5.07□□□□□ -1.6
CTK1YKL139W EMC3P36039 253 aa5.07□□□□□ -1.6
CTK1YKL139W YBR071WP38243 211 aa5.07□□□□□ -1.6
CTK1YKL139W ALT1P52893 592 aa5.07□□□□□ -1.6
CTK1YKL139W DAM1P53267 343 aa5.07□□□□□ -1.6
CTK1YKL139W MDM38Q08179 573 aa5.07□□□□□ -1.6
CTK1YKL139W MET7Q08645 548 aa5.07□□□□□ -1.6
CTK1YKL139W THS1P04801 734 aaKnown RBP5.06□□□□□ -1.6
CTK1YKL139W RPS4AP0CX35 261 aaKnown RBP5.06□□□□□ -1.6
CTK1YKL139W RPS4BP0CX36 261 aaKnown RBP5.06□□□□□ -1.6
CTK1YKL139W CAF16P43569 289 aa5.06□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms